prot_H-paniculata_contig434.11062.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig434.11062.1
Unique Nameprot_H-paniculata_contig434.11062.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length133
Homology
[Close]
BLAST of mRNA_H-paniculata_contig434.11062.1 vs. uniprot
Match: A0A6H5KYE0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYE0_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 1.240e-17
Identity = 63/124 (50.81%), Postives = 73/124 (58.87%), Query Frame = 0 
Query:   12 PLGRNSQSLGGITGAESSPGSDRSSFVSRVGSYALTDIGVAESER---DAIGAAGRR---GLYSPTSTVMRST-GVSELGSDTRLSSGSPGXXXXXXXXXXXXAQSGWERAWMRQRDDVGQFRG 128
            P GRNSQS+GG+T      G +  SFVSR GSYALTDIGV  S++   D  G AG     G  SP ST+MRS  GVSE+G++ R S GS              A SGWERAWMRQR+D   F G
Sbjct:  177 PSGRNSQSMGGMTAESDGDGGE--SFVSRAGSYALTDIGVGHSDQGRGDQAGKAGGASGAGALSPASTIMRSVHGVSEVGTE-RDSYGSE--TAYTNASDSPGAHSGWERAWMRQRNDARHFGG 295
[Close]
BLAST of mRNA_H-paniculata_contig434.11062.1 vs. uniprot
Match: D8LN23_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN23_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 1.770e-16
Identity = 59/119 (49.58%), Postives = 71/119 (59.66%), Query Frame = 0 
Query:   12 PLGRNSQSLGGITGAESSPGSDRSSFVSRVGSYALTDIGVAESERDAIGAAGRRG------LYSPTSTVMRST-GVSELGSDTRLSSGSPGXXXXXXXXXXXXAQSGWERAWMRQRDDV 123
            P GRNSQS+GG+T      G +  SFVSR GSYALTDIGV  S++     AG+ G        SPTST+MRS  G+SE+G++ R S GS              A SGWERAWMRQR+D 
Sbjct:  185 PSGRNSQSMGGMTAESDGDGGE--SFVSRAGSYALTDIGVGHSDQGRGNQAGKAGGDSGAGALSPTSTLMRSVHGMSEVGTE-RDSYGSEAAYTNASDSPG--AHSGWERAWMRQRNDA 298
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig434.11062.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KYE0_9PHAE1.240e-1750.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN23_ECTSI1.770e-1649.58Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig434contigH-paniculata_contig434:878..5928 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig434.11062.1mRNA_H-paniculata_contig434.11062.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig434 878..8612 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig434.11062.1 ID=prot_H-paniculata_contig434.11062.1|Name=mRNA_H-paniculata_contig434.11062.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=133bp
GDRRGTSPLRSPLGRNSQSLGGITGAESSPGSDRSSFVSRVGSYALTDIG
VAESERDAIGAAGRRGLYSPTSTVMRSTGVSELGSDTRLSSGSPGGSDGE
YNSDSPGAQSGWERAWMRQRDDVGQFRGAGGQ*
back to top