mRNA_H-paniculata_contig4338.11060.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4338.11060.1
Unique NamemRNA_H-paniculata_contig4338.11060.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig4338.11060.1 vs. uniprot
Match: D8LK21_ECTSI (Possible Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK21_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 3.120e-52
Identity = 95/177 (53.67%), Postives = 127/177 (71.75%), Query Frame = 3 
Query:  441 FKQFEGKNFSRTFHLGEQLGKGSRSTVFKATLAGRWTDGCGSSSSVSSSLSLSWSSSTTVKKCYAVKRTMRKGLSRQAEKCLLMEVHILRKLQHPNVVGIYQFYQNNPDYYYMVLDLVTGGALYDRIVKKATYNEEDARDLCRTLLNGVKYCHDMGVVHRDLKPENILLCSSAGNAG 971
            F++F  K FSR+F+LG++LG+G+ + VF+AT+ G    G                      K YAVKRT+R+GL+++ EK LL EV ILR LQH NVV IYQF+Q++PDYYYMVL+ + GG L+DRIV+K+ YNEE+ARDLCR LL+ V+YCH++G+VHRDLKPEN+LL S   +AG
Sbjct:   68 FREFHSKRFSRSFNLGKKLGEGAFAEVFEATVKGDRPGG----------------------KSYAVKRTVRRGLAKEDEKGLLEEVRILRLLQHSNVVAIYQFFQDDPDYYYMVLENMAGGELFDRIVQKSYYNEEEARDLCRVLLDSVRYCHELGIVHRDLKPENLLLTSKHDDAG 222
[Close]
BLAST of mRNA_H-paniculata_contig4338.11060.1 vs. uniprot
Match: A0A6H5K8A8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8A8_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 1.540e-39
Identity = 82/174 (47.13%), Postives = 113/174 (64.94%), Query Frame = 3 
Query:  447 QFEGKNFSRTFHLGEQLGKGSRSTVFKATLAGRWTDGCGSSSSVSSSLSLSWSSSTTVKKCYAVKRTMRKGLSRQAEKCLLMEVHILRKLQHPNVVGIYQFYQNNPDYYYMVLDLVTGGALYDRIVKKATYNEEDARDLCRTLLNGVKYCHDMGVVHRDLKPENILLCSSAGNA 968
            +F+GK+F  T+HLG  +G+G+ S V+ AT+      G      V                  AVK   R  L ++ E+ LL EV ILR L+HPNV+ IYQF++++PD YY+ ++ + GG L+DRIVKKA YNE++ARDLCR LL+ V+YCHD+G+VHRDLKPEN+LL S   +A
Sbjct:   45 EFDGKDFYDTYHLGNVIGEGAFSKVYSATVK---KPGPNQGLQV------------------AVKCIERNNLPKEDEEDLLEEVRILRSLKHPNVIDIYQFFKDDPDNYYVSIEYMRGGELFDRIVKKAFYNEKEARDLCRILLDAVRYCHDLGIVHRDLKPENLLLTSQHDDA 197
[Close]
BLAST of mRNA_H-paniculata_contig4338.11060.1 vs. uniprot
Match: A0A835YZ60_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ60_9STRA)

HSP 1 Score: 143 bits (360), Expect = 2.320e-36
Identity = 74/177 (41.81%), Postives = 105/177 (59.32%), Query Frame = 3 
Query:  438 PFKQFEGKNFSRTFHLGEQLGKGSRSTVFKATLAGRWTDGCGSSSSVSSSLSLSWSSSTTVKKCYAVKRTMRKGLSRQAEKCLLMEVHILRKLQHPNVVGIYQFYQNNPDYYYMVLDLVTGGALYDRIVKKATYNEEDARDLCRTLLNGVKYCHDMGVVHRDLKPENILLCSSAGNA 968
            PF  F+G+N    F LG+ LG+G+ + V + T +                            + YAVK   +  L+ + E  LL EV ILR+L HPN++ IYQFY+   D YY++++ + GG L+DRIVKK  Y E++ARDLC+ LL+ +KYCHD  +VHRDLKPEN+LL S+  +A
Sbjct:   28 PFPDFDGRNLKANFKLGKDLGEGAYAKVVEGTYS-------------------------VTGRTYAVKMVRKANLAPEDEADLLEEVKILRQLNHPNIIDIYQFYRQERDNYYVIIEYMRGGELFDRIVKKQFYTEKEARDLCKILLDAIKYCHDRDIVHRDLKPENLLLTSNDDDA 179
[Close]
BLAST of mRNA_H-paniculata_contig4338.11060.1 vs. uniprot
Match: D8LEF0_ECTSI (Myosin light chain kinase (MLCK) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF0_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 3.830e-36
Identity = 80/168 (47.62%), Postives = 111/168 (66.07%), Query Frame = 3 
Query:  465 FSRTFHLGEQLGKGSRSTVFKATLAGRWTDGCGSSSSVSSSLSLSWSSSTTVKKCYAVKRTMRKGLSRQAEKCLLMEVHILRKLQHPNVVGIYQFYQNNPDYYYMVLDLVTGGALYDRIVKKATYNEEDARDLCRTLLNGVKYCHDMGVVHRDLKPENILLCSSAGNA 968
            FS+ + LG  LG+G+   VFKAT A          +S+S     +   S    + YAVKR  R+GLS Q E+ ++ E +I+R+L HPN+V IY FYQ++P ++YMVL+L+ GG L+DRIV+K  YNE +ARD+C T L  +KY H  GVVHRDLKPEN+LL S + ++
Sbjct:  358 FSKAYQLGNMLGEGAYGMVFKATPA--------LPASLSEEEDGADDGSAAAPREYAVKRIKREGLSDQEEQEVIAEANIMRELDHPNLVSIYDFYQDDPKFFYMVLELMEGGELFDRIVQKQYYNEAEARDVCLTFLEAMKYTHGQGVVHRDLKPENLLLASKSDDS 517
[Close]
BLAST of mRNA_H-paniculata_contig4338.11060.1 vs. uniprot
Match: A0A835Z082_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z082_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.140e-31
Identity = 60/113 (53.10%), Postives = 81/113 (71.68%), Query Frame = 3 
Query:  630 YAVKRTMRKGLSRQAEKCLLMEVHILRKLQHPNVVGIYQFYQNNPDYYYMVLDLVTGGALYDRIVKKATYNEEDARDLCRTLLNGVKYCHDMGVVHRDLKPENILLCSSAGNA 968
            YAVK   +  +  + E  LL EV+ILR+L+HPN++ IYQFY   PD YY++++ + GG L+DRIVKK  Y E++ARDLC+ LL  +K CHD  +VHRDLKPEN+LL S   +A
Sbjct:    1 YAVKMLTKAKMEPEDEANLLEEVNILRELKHPNIISIYQFYCQEPDNYYVIIEYMQGGELFDRIVKKQFYMEKEARDLCKALLGAIKCCHDRDIVHRDLKPENLLLTSDVDDA 113
[Close]
BLAST of mRNA_H-paniculata_contig4338.11060.1 vs. uniprot
Match: A0A067CU08_SAPPC (CAMK/CAMK1 protein kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CU08_SAPPC)

HSP 1 Score: 124 bits (310), Expect = 6.870e-29
Identity = 68/172 (39.53%), Postives = 102/172 (59.30%), Query Frame = 3 
Query:  453 EGKNFSRTFHLGEQLGKGSRSTVFKATLAGRWTDGCGSSSSVSSSLSLSWSSSTTVKKCYAVKRTMRKGLSRQAEKCLLMEVHILRKLQHPNVVGIYQFYQNNPDYYYMVLDLVTGGALYDRIVKKATYNEEDARDLCRTLLNGVKYCHDMGVVHRDLKPENILLCSSAGNA 968
            E K+F   + LG++LG+G+ S V + T                              K YA+K   ++GL+++    L  E+ IL+K+ HPN++ +Y+ + + P YYY+V +++ GG L+DRIV+K  Y E++ARDL   LLN +KYCHD GVVHRDLKPEN+LL S + +A
Sbjct:   32 ETKHFDEVYTLGKKLGEGTFSVVKEGTHKASG-------------------------KKYAIKCIKKQGLTQEDLDALHEEISILKKMDHPNIMTLYEVF-SEPAYYYLVTEIMEGGELFDRIVEKTYYTEKEARDLVLILLNAIKYCHDRGVVHRDLKPENLLLTSKSDDA 177
[Close]
BLAST of mRNA_H-paniculata_contig4338.11060.1 vs. uniprot
Match: A0A1V9Z7C8_9STRA (Calcium/calmodulin-dependent protein kinase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z7C8_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.370e-28
Identity = 71/178 (39.89%), Postives = 104/178 (58.43%), Query Frame = 3 
Query:  435 PPFKQFEGKNFSRTFHLGEQLGKGSRSTVFKATLAGRWTDGCGSSSSVSSSLSLSWSSSTTVKKCYAVKRTMRKGLSRQAEKCLLMEVHILRKLQHPNVVGIYQFYQNNPDYYYMVLDLVTGGALYDRIVKKATYNEEDARDLCRTLLNGVKYCHDMGVVHRDLKPENILLCSSAGNA 968
            PP  + E K F+  + LG++LG+G+ S V + T                           T KK YA+K   ++GL+++    L  E+ IL+K+ HPN++ +Y  +    DYY +V +++ GG L+DRIV+K  Y E++ARDL   LLN +KYCHD GVVHRDLKPEN+LL S + +A
Sbjct:   29 PPATEGETKRFNAVYTLGKKLGEGTFSVVKEGT------------------------HKETGKK-YAIKCIKKQGLTQEDLDALHEEISILKKMDHPNIMTLYDVFSEQSDYY-LVTEIMEGGELFDRIVEKTYYTEKEARDLVLILLNAIKYCHDRGVVHRDLKPENLLLTSKSDDA 180
[Close]
BLAST of mRNA_H-paniculata_contig4338.11060.1 vs. uniprot
Match: D8LGW1_ECTSI (Ca2+/calmodulin-dependent protein kinase II n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW1_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 1.510e-28
Identity = 68/157 (43.31%), Postives = 103/157 (65.61%), Query Frame = 3 
Query:  489 EQLGKGSRSTVFKATLAGRWTDGCGSSSSVSSSLSLSWSSSTTVKKCYAVKRTMRKGLSRQAEKCLLMEVHILRKLQHPNVVGIYQFYQNNPDYYYMVLDLVTGGALYDRIVKKATYNEEDARDLCRTLLNGVKYCHDMGVVHRDLKPENILLCSSA 959
            ++LG+G+   VF+AT   R   G  S++ V ++            +  AVKR  ++GL+++    ++ E +I+R+L HPNVV IY FY+++P Y+Y+ L+L+ GG L DRIV+K  YNE +ARD+C  LL  V+Y H  G+VHRDLKPEN+LL S++
Sbjct:  420 KKLGEGAYGQVFQAT---RIASGDASAAGVGAA-----------PRYIAVKRIQKEGLTKKETGDIINEANIMRELNHPNVVSIYGFYEDDPKYFYLALELMEGGELLDRIVQKTYYNEAEARDVCVPLLRAVEYLHSQGIVHRDLKPENLLLASAS 562
[Close]
BLAST of mRNA_H-paniculata_contig4338.11060.1 vs. uniprot
Match: D7FK36_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK36_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 1.880e-27
Identity = 70/168 (41.67%), Postives = 100/168 (59.52%), Query Frame = 3 
Query:  465 FSRTFHLGEQLGKGSRSTVFKATLAGRWTDGCGSSSSVSSSLSLSWSSSTTVKKCYAVKRTMRKGLSRQAEKCLLMEVHILRKLQHPNVVGIYQFYQNNPDYYYMVLDLVTGGALYDRIVKKATYNEEDARDLCRTLLNGVKYCHDMGVVHRDLKPENILLCSSAGNA 968
            FSR + LG++LG+G+ +  F A   G+     GS                    C  VKR +++G S +    L+ E  ILR L HP+VV +++ + + PDY+Y+VL+ + GG ++DRIV K  + E DAR LCRTL+  V++CHDMGVVHRDL+PE +LL S   NA
Sbjct:  513 FSRLYALGKKLGEGAFAETFGAIRRGQRKGSQGS--------------------CI-VKRAVQRGASHEVMHGLVEEARILRLLTHPSVVTVHEVFSDAPDYFYLVLEHLAGGPVFDRIVTKTRFRESDARHLCRTLVLCVQHCHDMGVVHRDLRPEQLLLTSRDENA 659
[Close]
BLAST of mRNA_H-paniculata_contig4338.11060.1 vs. uniprot
Match: A0A7S2XV40_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV40_9STRA)

HSP 1 Score: 119 bits (298), Expect = 2.690e-27
Identity = 67/171 (39.18%), Postives = 101/171 (59.06%), Query Frame = 3 
Query:  456 GKNFSRTFHLGEQLGKGSRSTVFKATLAGRWTDGCGSSSSVSSSLSLSWSSSTTVKKCYAVKRTMRKGLSRQAEKCLLMEVHILRKLQHPNVVGIYQFYQNNPDYYYMVLDLVTGGALYDRIVKKATYNEEDARDLCRTLLNGVKYCHDMGVVHRDLKPENILLCSSAGNA 968
            G +F +++ L ++LG GS STV +                           S    + +AVK   R  L    E+ L+ EV IL+ + HPN++ +Y+F++    +YY+V++L+ GG L+DRIV+K  YNE++ARDL   LL+ +K+CHD G+VHRDLKPEN+LL SS  +A
Sbjct:   21 GASFDKSYKLLKELGSGSFSTVREGV-------------------------SKLNGERFAVKIVKRMDLPPDDEEALIEEVTILKHVDHPNIIKLYEFFEEK-HFYYLVIELMEGGELFDRIVQKTYYNEKEARDLVHILLSAIKFCHDNGIVHRDLKPENLLLTSSKDDA 165
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4338.11060.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK21_ECTSI3.120e-5253.67Possible Ca2+/calmodulin-dependent protein kinase,... [more]
A0A6H5K8A8_9PHAE1.540e-3947.13Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A835YZ60_9STRA2.320e-3641.81Kinase-like domain-containing protein n=1 Tax=Trib... [more]
D8LEF0_ECTSI3.830e-3647.62Myosin light chain kinase (MLCK) n=1 Tax=Ectocarpu... [more]
A0A835Z082_9STRA1.140e-3153.10Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A067CU08_SAPPC6.870e-2939.53CAMK/CAMK1 protein kinase n=2 Tax=Saprolegnia TaxI... [more]
A0A1V9Z7C8_9STRA1.370e-2839.89Calcium/calmodulin-dependent protein kinase n=1 Ta... [more]
D8LGW1_ECTSI1.510e-2843.31Ca2+/calmodulin-dependent protein kinase II n=1 Ta... [more]
D7FK36_ECTSI1.880e-2741.67Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A7S2XV40_9STRA2.690e-2739.18Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4338contigH-paniculata_contig4338:7875..12146 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score129.4
Seed ortholog evalue2.1e-27
Seed eggNOG ortholog2880.D8LGW1
KEGG koko:K08794
KEGG Pathwayko04921,ko04925,map04921,map04925
Hectar predicted targeting categoryother localisation
EggNOG free text desc.calmodulin-dependent protein kinase activity
EggNOG OGsKOG0032@1,KOG0032@2759,KOG0033@1,KOG0033@2759
EC2.7.11.17
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Exons5
Model size973
Cds size666
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4338.11060.1prot_H-paniculata_contig4338.11060.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4338 7875..11841 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930317.1930895-CDS-H-paniculata_contig4338:7874..80151622930317.1930895-CDS-H-paniculata_contig4338:7874..8015Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4338 7875..8015 -
1691481238.9384723-CDS-H-paniculata_contig4338:7874..80151691481238.9384723-CDS-H-paniculata_contig4338:7874..8015Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4338 7875..8015 -
1622930317.213881-CDS-H-paniculata_contig4338:8893..90281622930317.213881-CDS-H-paniculata_contig4338:8893..9028Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4338 8894..9028 -
1691481238.9492495-CDS-H-paniculata_contig4338:8893..90281691481238.9492495-CDS-H-paniculata_contig4338:8893..9028Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4338 8894..9028 -
1622930317.2310877-CDS-H-paniculata_contig4338:10063..102961622930317.2310877-CDS-H-paniculata_contig4338:10063..10296Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4338 10064..10296 -
1691481238.958372-CDS-H-paniculata_contig4338:10063..102961691481238.958372-CDS-H-paniculata_contig4338:10063..10296Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4338 10064..10296 -
1622930317.2513912-CDS-H-paniculata_contig4338:11317..114531622930317.2513912-CDS-H-paniculata_contig4338:11317..11453Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4338 11318..11453 -
1691481238.9683697-CDS-H-paniculata_contig4338:11317..114531691481238.9683697-CDS-H-paniculata_contig4338:11317..11453Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4338 11318..11453 -
1622930317.2715704-CDS-H-paniculata_contig4338:11820..118411622930317.2715704-CDS-H-paniculata_contig4338:11820..11841Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4338 11821..11841 -
1691481238.9781935-CDS-H-paniculata_contig4338:11820..118411691481238.9781935-CDS-H-paniculata_contig4338:11820..11841Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4338 11821..11841 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930317.2899964-UTR-H-paniculata_contig4338:11841..121461622930317.2899964-UTR-H-paniculata_contig4338:11841..12146Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4338 11842..12146 -
1691481238.987785-UTR-H-paniculata_contig4338:11841..121461691481238.987785-UTR-H-paniculata_contig4338:11841..12146Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4338 11842..12146 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4338.11060.1

>prot_H-paniculata_contig4338.11060.1 ID=prot_H-paniculata_contig4338.11060.1|Name=mRNA_H-paniculata_contig4338.11060.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=222bp
MGLRKAMSAAYRYAKQHMPGSTDDCSESNKAGVQPPPPPPRPRPPFKQFE
GKNFSRTFHLGEQLGKGSRSTVFKATLAGRWTDGCGSSSSVSSSLSLSWS
SSTTVKKCYAVKRTMRKGLSRQAEKCLLMEVHILRKLQHPNVVGIYQFYQ
NNPDYYYMVLDLVTGGALYDRIVKKATYNEEDARDLCRTLLNGVKYCHDM
GVVHRDLKPENILLCSSAGNAG
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mRNA from alignment at H-paniculata_contig4338:7875..12146-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4338.11060.1 ID=mRNA_H-paniculata_contig4338.11060.1|Name=mRNA_H-paniculata_contig4338.11060.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4272bp|location=Sequence derived from alignment at H-paniculata_contig4338:7875..12146- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTTGAGTTGAACGTGTTCTGCGGGGCGCTCGCTGTTTCGCGTGTGCGGTA
TACACCGTAGTACTGAAAGCAGCAGGGCTGTATAGTCCCCACTGCTACTG
CAGGCAGCAGTGCAATTTTTGAGTTACTTGTCCTCAAACAGACACTTGCA
CCAGGGGTGAAAATCCGTCCGCACCTGCACCCTGTTCCTGTACAGACGTA
ATTGGTGCATAGAGCAAGCTTGAAAGACCGGTCCGCTGGGACGCCGAGGG
CTGTGAAGTGCTGTATCCTTCTGTCTGCCTATTGAAGCCGAAGGAATCTT
CCACGATGGGCTTGCGCAAGGCCATGGTATGGACGGGGAAGAAGAGATTT
GCATCGGGAGAGTTTAAATGTCCTCGTCGTTGTTCGATTTTTCGTCTGCA
CCTTTCGATTCCAATCAAAACTGTATCATGGAAGGATGTGAGTTAAAGCG
TTCAGCAAATTCAGAGCATCAATACCGCCTGTACAGCAGGTGTCGACAAG
ACCCGTTTTGCTGATGCAAGCGACGAGCAGTTACGCAAACAAGTCCTTCA
AGGTGCCCTTTTCGCTGAACCTGTAAGAACTAGTCAACATCCCCATCACC
ATCGACAGTGCACATTCTGTAATCGATTCCATCCTCTGTTTTATTTTGTC
TTTTTGTTGTGTACGGTGTATGTACATCTTCGATATTTCTCAGTCGGCAG
CGTACCGCTACGCGAAGCAGCACATGCCTGGCAGCACGGATGACTGCTCC
GAATCGAACAAGGCAGGCGTACAGCCACCGCCGCCGCCACCGCGCCCGCG
CCCACCATTCAAGCAATTCGAAGGGAAAAGTAAGAAACGGAGTTAAATAA
CTGCACACTTGTAATCTCCGACAACACATAATGATTCAGTCTGTTGTACT
GTCAGTGGCACAGGTCACATGAGAATAAATCTCAAGTTCTTAAAATATGT
ATCAAGCTCCAAGCTTTCCCTGAACCTGTGTTGACTGCGTCAGAGACACA
GAAGACTGTTCATCTTATGAGAACTCGCACCGGGACCTTGTGAAAAAGGT
GCTGTGGCTGTACCCCGGAGGAAAATAATCAACCCTTGCGTCTTGCGAGA
TGGACGGAGGAAAACATGACAACGCGCCCACCCAACACGCCCAACGCCCG
CACGTCTACCCACCTCCTGTACCCCCCTTTCACCTACCACCCGCCACCGA
ACTATCTACCACTACTCGCGTTCTCCGTCTTCGTCACTAGCCCCCTAAAA
CTGGCTGCTCTTCTCGCATTTCTGATGTGTGTTTTTCGAAAACCCAGTTC
AACATCATTGGGCTAAAAGTTGATAAAATCAGAATTTGTGCGTTGGCTGG
TGGTACATGAAACTCGTCATTGTATTTAAAATATATGTGTCTAGGACGAT
TCGTGGCCGAATAAATGACCTTAGACATTAACGAGTAGGAGGGAGAAAGA
GAGAGAGAGGGAGAGAGGGAGATTTCGTGACCGCATTGAATTGATTATGT
TTATATATATATATATTTATTTATTACAGAACGACTTGATGGATTGGTCT
ACAAAAATTATTGTAGACGAATGACGTCACTATTTCCCCGTAATTTTGCA
AAATTTTGATCTTCTCAAACATACCGGAAAAATCCCGGACACTGGGGATT
GGTCTCTACGTTCGCCAGTAAATTCCGCGATCATATACCTCTGAGGTCAG
TGGATCAATCATCCGATCAAGGAATTGAGGACACACACACTCTCTCTCTA
TATATATATATATTGTATTTTTCTCATCAGCGTTCCTGTTTGATATAAGA
CCAGCCCAATCAATAGTGACTTTGACTCCTTCCTCTCCTCGACCAATCAG
ACTTCTCGCGGACTTTCCATTTGGGCGAGCAGCTGGGAAAGGGCTCGCGA
TCCACTGTGTTCAAGGCCACGCTTGCTGGAAGATGGACTGATGGATGCGG
ATCGTCGTCATCGGTGTCATCGTCGTTGTCTTTATCCTGGTCATCCTCTA
CCACGGTGAAAAAGTGCTACGCTGTGAAACGGACCATGCGAAAGGGCTTG
TCCAGGCAGGCAGAGAAGTGTCTATTGATGGAGGTGAGTGGGGCATTTTA
TGTTTCGTATTTCTCTATTTGGGAATTGCTCTCTCAAGTTGAAATATTAA
CTTGTTGAAGGTACACACACACACACACATACACACATACACATCGTTAT
TTTTTTAATTGGTAATTTTGCACTTTTTTCGCCAGTGTTTGTGCCCATCA
CTAATAAGGACGTGAAATCACTTGACGTATACTATCGAAAACTGTTTAAA
AAAAAAAAAAACGCGAACATGGTCGCCGTACAAAAAATTATTCACCTGTA
ACCCCCTTAAGCATCGTTTTGAATGTATAACTGTCTGTTCTTTTTTCAAT
GGGTATACAAGCAGCTACCAGCACGGGACACAGGGTAACCCTCCGCGATC
CAGGCGTTCATGTAAAAGCGGACAGCGATCATGTTGTGAACAAATACTAC
AGATGACCGCTTGATAACCCAATCATATCAGCAGCAGCAGTAGCGCGACC
ATCTGTTATTGTTTGCTGAATGAAGAAAAGGTCGCTTGACTTCTGGGTGA
CGAGAAAGTACACATTCATACAGATAGGAGGATCATCATATATCACGCAA
ATAGACACATGAGTCTTTTTCTTTTCTTTTCTTTTCTTTAAGTTAGCACC
ATTGTTGCTTTCATTTGCTACAGCATCCCTCCCCGGTGTAACCTCGCGGC
ATCTTTCGCGTTGTCGTGTGTGCAGCTCACAATACTTGTGTCCTACAGTC
CAGTGTTGATTTGATGATTTGGTGTTAAGTTGTCATTTATTTGTAGACAC
AGTACAACGCGCGCCCGGGTTCGATTTTTTTTTTGTTTTTTTTGTTTCGA
AAAGAAAGACTTCGCGCAACGCTGCGCCAAAGAGCCAGACGTGAAATTTT
GCGGCGTGTCCTAATTTTTAATATAGTAGATCACGGCGTCCTCGGGCCAT
TTACCGACAGTCACATAAATAGCTGTTCTCGGTGACGTTTTGACGAAATA
TAGTTGACGTTTTTTTTGGGGTTTTTTTTGCTCCTCCTGTACATGATATT
CACACGCGAAAAACAAAGGTGCACATCCTGCGGAAATTACAACACCCGAA
CGTGGTTGGCATCTACCAGTTTTATCAAAACAATCCAGACTACTACTACA
TGGTGCTGGACCTCGTAACCGGCGGCGCGCTCTACGATCGCATCGTCAAA
AAGGTATGCTGTACACACACATTGTGTATGTATGTCGGAAGATGTTGCGA
AAAACTTAAATGTTTTCAGTTCGACCGTGACGGGAAAAAGGTACTTGACC
CTGTGGGCGACGGTCCTCAGCAAGTCTCCATCTGAAAGAAAAAAAAAAGA
CATGATTATAGATAGGGATCGGAAGATATCATTGTTTCAGGCAGCCAGTC
GTGTATGAACAGACAGAAGACTAGTTTTCTAGTTGGCATTGCTCACAAAA
CCACAGTCGTGCGTTCAACAACGACGGTACTCTCACGGCACCCATTGCCG
TATCGTTGGGAATGCCTCGTTGAGATCTTTTGTTAGACCCGGTATTTCGG
CAGTTACGCGGTTGTTGCTTCTCGAGAAATCTTAGGGTTTGGAAACGAAT
ACTAAAGGGTGCGATATCAAAGCGTGTTACGGTATCTATGTCTTCGTCAT
TTGATGATTTTTCTTCCAACTCGAAAACAACCCCAGCTCTCCCCCTCAAA
AAGGTACAATGTGTGCTTTTTGCGAGTATTCCGGAAAAGGGTACCGTTAG
TATTGGACCGTAGAGATTGGCGGTTAAAAAGAGACAGTAGATAGGTATGC
CTGAGGACGTTCTAAGAAAAGGTACTGTCTTCATCCGTGGCGTCCTTGCC
CCCCCACCACTCTCGTAGTTTATTTAGTTTGTGGATAGGATAAGTACCCT
CCCCACCCTCGTCGAAACAGCGTTTCGTCTTCTCGAGGACACATGGTCAA
AAAACAGCCTTTCTGACGGCTAAGGCATACAAGACATAGAACGACATCCC
CCCCCTCCCCCTCCCCGGGCCACTACTCTGACGCGCCTTCGTGGATGATC
TGTTTGTGTGTAAAAACAAAACGACGAATAGGCCACCTATAACGAGGAAG
ACGCGAGGGATCTATGCCGAACACTCTTGAACGGCGTCAAGTATTGCCAT
GACATGGGCGTGGTGCATCGCGATCTGAAGCCGGAGAACATCTTGCTCTG
TTCTTCCGCGGGAAACGCTGGT
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Coding sequence (CDS) from alignment at H-paniculata_contig4338:7875..12146-

>mRNA_H-paniculata_contig4338.11060.1 ID=mRNA_H-paniculata_contig4338.11060.1|Name=mRNA_H-paniculata_contig4338.11060.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1332bp|location=Sequence derived from alignment at H-paniculata_contig4338:7875..12146- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGCTTGCGCAAGGCCATGATGGGCTTGCGCAAGGCCATGTCGGCAGC
GTACCGCTACGCGAAGCAGCACATGCCTGGCAGCACGGATGACTGCTCCG
AATCGAACAAGGCAGGCGTACAGCCACCGCCGCCGCCACCGCGCCCGCGC
CCACCATTCAAGCAATTCGAAGGGAAAATCGGCAGCGTACCGCTACGCGA
AGCAGCACATGCCTGGCAGCACGGATGACTGCTCCGAATCGAACAAGGCA
GGCGTACAGCCACCGCCGCCGCCACCGCGCCCGCGCCCACCATTCAAGCA
ATTCGAAGGGAAAAACTTCTCGCGGACTTTCCATTTGGGCGAGCAGCTGG
GAAAGGGCTCGCGATCCACTGTGTTCAAGGCCACGCTTGCTGGAAGATGG
ACTGATGGATGCGGATCGTCGTCATCGGTGTCATCGTCGTTGTCTTTATC
CTGGTCATCCTCTACCACGGTGAAAAAGTGCTACGCTGTGAAACGGACCA
TGCGAAAGGGCTTGTCCAGGCAGGCAGAGAAGTGTCTATTGATGGAGACT
TCTCGCGGACTTTCCATTTGGGCGAGCAGCTGGGAAAGGGCTCGCGATCC
ACTGTGTTCAAGGCCACGCTTGCTGGAAGATGGACTGATGGATGCGGATC
GTCGTCATCGGTGTCATCGTCGTTGTCTTTATCCTGGTCATCCTCTACCA
CGGTGAAAAAGTGCTACGCTGTGAAACGGACCATGCGAAAGGGCTTGTCC
AGGCAGGCAGAGAAGTGTCTATTGATGGAGGTGCACATCCTGCGGAAATT
ACAACACCCGAACGTGGTTGGCATCTACCAGTTTTATCAAAACAATCCAG
ACTACTACTACATGGTGCTGGACCTCGTAACCGGCGGCGCGCTCTACGAT
CGCATCGTCAAAAAGGTGCACATCCTGCGGAAATTACAACACCCGAACGT
GGTTGGCATCTACCAGTTTTATCAAAACAATCCAGACTACTACTACATGG
TGCTGGACCTCGTAACCGGCGGCGCGCTCTACGATCGCATCGTCAAAAAG
GCCACCTATAACGAGGAAGACGCGAGGGATCTATGCCGAACACTCTTGAA
CGGCGTCAAGTATTGCCATGACATGGGCGTGGTGCATCGCGATCTGAAGC
CGGAGAACATCTTGCTCTGTTCTTCCGCGGGAAACGCTGGTGCCACCTAT
AACGAGGAAGACGCGAGGGATCTATGCCGAACACTCTTGAACGGCGTCAA
GTATTGCCATGACATGGGCGTGGTGCATCGCGATCTGAAGCCGGAGAACA
TCTTGCTCTGTTCTTCCGCGGGAAACGCTGGT
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