prot_H-paniculata_contig43371.11058.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig43371.11058.1
Unique Nameprot_H-paniculata_contig43371.11058.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length233
Homology
BLAST of mRNA_H-paniculata_contig43371.11058.1 vs. uniprot
Match: G4TMG6_SERID (Uncharacterized protein n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4TMG6_SERID)

HSP 1 Score: 153 bits (386), Expect = 4.750e-40
Identity = 87/247 (35.22%), Postives = 139/247 (56.28%), Query Frame = 0
Query:    4 EPKSAAEALKRPEAEKLRAAMEEEWGTLVDNGTWENEDPGRLPAGRKAIRTKWIFKRKLEDDGSVARYKTRLVVQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEGMDVDAAYSNAPVEEELFV-----------------KLHPDFSPLL-PRHTTNLLAAVYVDDLVIAGRR-EKVDEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDTTISQGSYIREVLKIYGFDECRGVPT 231
            EP +  E+LKRP+ +    A  EE    ++NGTW+     RLP G+KAI ++W+FK K + DGS+++YK R+V +G++Q EG D  ET A+ AR   LRT  +LAA  D+ELE +D+  A+ N  ++ ++++                 +L  D S  +  R +  ++  V+VDDL+ A +  E +   K  +  RF+I D G  S +LG++  RD  +   ++SQ +YI ++L+ Y   EC G  T
Sbjct:   54 EPTTLGESLKRPDGDNYVQAAIEEVRAHLENGTWKLV---RLPQGKKAIGSRWVFKIKRDADGSISKYKGRIVAKGYAQREGIDYTETFAQTARFGALRTITALAALEDWELESVDISTAFLNGEIDAKVYMQKLEGVEFEGYEEIGFKRLESDHSVFIYERDSVKIIVPVHVDDLLFASKSSEAIQMVKDELKARFKIHDQGPTSFLLGVKPERDRQSHTISLSQPAYIEQILETYKMQECNGADT 297          
BLAST of mRNA_H-paniculata_contig43371.11058.1 vs. uniprot
Match: A0A4S4M1D7_9APHY (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4M1D7_9APHY)

HSP 1 Score: 146 bits (368), Expect = 1.700e-36
Identity = 83/273 (30.40%), Postives = 143/273 (52.38%), Query Frame = 0
Query:    4 EPKSAAEALKRPEAEKLRAAMEEEWGTLVDNGTWENEDPGRLPAGRKAIRTKWIFKRKLEDDGSVARYKTRLVVQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEGMDVDAAYSNAPVEEELFVKLHPDFSP--------------------------------------------LLPRHTTNLLAAVYVDDLVIAGR-REKVDEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDTTISQGSYIREVLKIYGFDECRGVPT 231
            EP++ AEA++RP+A+K   A ++E  + ++NGTWE     +LP GRKAI ++W+F+ K   DGS+ RYK RLV QGF+Q  G +  ET A   + +TLRT  ++AA  D E+E +D   AY N  +++++++K    F+                                             +L   T N++  V+VDD  +  + +  + + K  + +RF+++DLG ++++LG+++ RD      ++SQ  Y  ++L  +   +CR V T
Sbjct:  669 EPRTFAEAMRRPDADKWYQAAQDEIKSHLENGTWEL---AQLPEGRKAIGSRWVFRIKYNADGSIERYKARLVAQGFAQRPGLEYDETFASTLKWATLRTILAIAAIEDMEIECIDFSTAYLNGEIDKDVYMKQPEGFADGDQVCKLGKGIYGLKQGGRLWYKKLAATLVSMGFKILRSDNSVYVLSNDTVNVVIPVFVDDCTLVSKDKAAIQKXKDELLKRFKLRDLGPINQLLGVQITRDRSKRTLSLSQRQYXXDILAKFXMADCRPVGT 938          
BLAST of mRNA_H-paniculata_contig43371.11058.1 vs. uniprot
Match: A0A6L2LES7_TANCI (Zinc finger, CCHC-type n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2LES7_TANCI)

HSP 1 Score: 142 bits (358), Expect = 2.030e-36
Identity = 85/240 (35.42%), Postives = 136/240 (56.67%), Query Frame = 0
Query:    1 IQGEPKSAAEALKRPEAEKLRAAMEEEWGTLVDNGTWENEDPGRLPAGRKAIRTKWIFKRKLEDDGSVARYKTRLVVQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEGMDVDAAYSNAPVEEELFVKLHPDFSPLLPRHTTNL--------------LAAVYVDDLVIAGR-REKVDEFKHNISQRFRIKDLGSLSRVLGIEVRRDHP--------NGDTTISQGSYIREV 217
            I+ +P++ +EA+   +   L+   + E  +++ N TWE  D   LP G KA+  KWI KRK++ DGS+ +YK RLV+QGF Q EG D F+T A VAR+ST+R   +L A HD  +  MDV  A+ N  ++EE+++K    F  ++P H + L              +  +YVDD++I G  +++V++ K  +S +  +KDLG    +LGI ++R +         N  T++SQ  Y R +
Sbjct:  112 IEEDPRTLSEAMASRDVAFLKETFQSEIDSIIHNDTWELTD---LPPGGKALGCKWILKRKIKVDGSIDKYKARLVIQGFRQKEGIDFFDTYASVARISTIRLLLALTAIHDLVIHQMDVKTAFLNGDLDEEIYMKQPEGF--VMPGHESKLTSVCIANLMLLKGVIICLYVDDMLIFGTDQDQVNKTKEFLSSKLDMKDLGKAEVILGIRIKRGNNDPTVKFRHNKGTSVSQLEYSRAI 346          
BLAST of mRNA_H-paniculata_contig43371.11058.1 vs. uniprot
Match: A0A8J5ZIB2_9ROSI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5ZIB2_9ROSI)

HSP 1 Score: 144 bits (362), Expect = 4.320e-36
Identity = 96/243 (39.51%), Postives = 131/243 (53.91%), Query Frame = 0
Query:    5 PKSAAEALKRPEAEKLRAAMEEEWGTLVDNGTWENEDPGRLPAGRKAIRTKWIFKRKLEDDGSVARYKTRLVVQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEGMDVDAAYSNAPVEEELFVKLHPDFSPL------LPRHT-------TNLLAA--VYVDDLVIAGR-REKVDEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDTTISQGSYIREVLKIYGFDECRGVPT 231
            P S AEALK P   K R A+EEE   L  N TW   D   LP G+KA+  KWIF  K   +GS+ RYK RLV +GF Q  G D  ET A VA+++T+R   SLA  +D++L  +DV  A+ N  +EEE++++L P    +      L  HT       TN  A   VYVDD+++ G   E++   K  +++    KDLG L   LG+EV R        I+Q  Y+ ++LK  GF  C+   T
Sbjct:  183 PTSIAEALKDP---KWRRAVEEEICALEKNATWTITD---LPQGKKAVGCKWIFAVKYNSNGSIQRYKARLVARGFMQTYGIDFTETFAPVAKLNTIRVLLSLAVNYDWKLHQLDVKNAFLNGKLEEEVYMQLPPSSKSIEGSNKSLADHTLFIKVTSTNKKAILIVYVDDIILTGDDEEEISNLKKLLNRELETKDLGKLRYFLGMEVARSKEG--LVINQRKYVLDLLKETGFLGCKPADT 417          
BLAST of mRNA_H-paniculata_contig43371.11058.1 vs. uniprot
Match: A0A438C2R4_VITVI (Copia protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438C2R4_VITVI)

HSP 1 Score: 144 bits (364), Expect = 5.920e-36
Identity = 86/241 (35.68%), Postives = 134/241 (55.60%), Query Frame = 0
Query:    5 PKSAAEALKRPEAEKLRAAMEEEWGTLVDNGTWENEDPGRLPAGRKAIRTKWIFKRKLEDDGSVARYKTRLVVQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEGMDVDAAYSNAPVEEELFVKLHPDFSPLLPRHTTN-------------LLAAVYVDDLVIAGR-REKVDEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDTTISQGSYIREVLKIYGFDECRGVPT 231
            P +  EALK     K + A+++E   L  NGTW   D   LP G++ +  KWIF  K + DGSV R+K RLV +GF+Q  G D  ET A VA+++T+R   SLA   D+ L+ +D+  A+ N  +EEE+++++ P F   + ++  N              +  VYVDD++++G   E++   K  +S++F +KDLG+L   LG+EV R        +SQ  YI ++LK  G   C+ + T
Sbjct:  794 PNTIQEALK---ISKWKKAVQDEIDALEKNGTWTITD---LPIGKRPVGCKWIFTIKYKADGSVERFKARLVARGFTQSYGIDYQETFAHVAKLNTIRIFLSLAVNQDWCLQQLDIKNAFLNGDLEEEVYMEIPPGFEESMAKNQANHTLFVKKSHAGKMAILIVYVDDIILSGNDMEELQNLKKYLSEKFEVKDLGNLKYFLGMEVARSRKG--IVVSQRKYILDLLKETGMLGCKPIDT 1026          
BLAST of mRNA_H-paniculata_contig43371.11058.1 vs. uniprot
Match: G4TTI1_SERID (Related to retrotransposon HobS hobase (N-terminal) (Fragment) n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4TTI1_SERID)

HSP 1 Score: 134 bits (338), Expect = 1.330e-35
Identity = 79/229 (34.50%), Postives = 128/229 (55.90%), Query Frame = 0
Query:    4 EPKSAAEALKRPEAEKLRAAMEEEWGTLVDNGTWENEDPGRLPAGRKAIRTKWIFKRKLEDDGSVARYKTRLVVQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEGMDVDAAYSNAPVEEELFVKLHPDFSPLLPRHTTNLLAAVYVDDLVIAGRR-EKVDEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDTTISQGSYIREVLKIYGFDECRGVPT 231
            EP +  EALKRP+ +K   A  EE    ++NGTW+     RLP G+KAI ++W+FK K + DGS+++YK R+V +G++Q EG D  ET    AR   LRT  +LAA  D+EL+                +F+    +   ++P         V++DDL++A +  + +   K+ +  RF+I+D G  S +LG+++ RD  +   ++SQ +YI ++L+ Y   +C G  T
Sbjct:    3 EPTTLGEALKRPDGDKYVQAATEEVRAHLENGTWKLV---RLPQGKKAIGSRWVFKIKRDADGSISKYKGRIVAKGYAQREGIDYTETFTPTARFGALRTIIALAALEDWELD----------------VFIYECDNVKIIVP---------VHIDDLLLASKSPDAIQIVKNELKARFKIRDQGPTSFLLGVKLERDRQSRTISLSQPAYIEQILETYEVRDCNGTDT 203          
BLAST of mRNA_H-paniculata_contig43371.11058.1 vs. uniprot
Match: A5AK46_VITVI (Integrase catalytic domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5AK46_VITVI)

HSP 1 Score: 143 bits (360), Expect = 2.000e-35
Identity = 87/261 (33.33%), Postives = 139/261 (53.26%), Query Frame = 0
Query:    3 GEPKSAAEALKRPEAEKLRAAMEEEWGTLVDNGTWENEDPGRLPAGRKAIRTKWIFKRKLEDDGSVARYKTRLVVQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEGMDVDAAYSNAPVEEELFVKLHPD--------------FSPLLPR-----------------HTTNLLAAVYVDDLVIAGRR-EKVDEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDTTISQGSYIREVLKIYGFDECRGVPT 231
            GEPK   EAL+   + K   AM++E  +L+ N TWE  +   LP G+KA+  KW++K K E DGS  RYK RLVV+GF Q EG D  E  + V +MST+R    + A  +  LE ++V  A+ +  +EE+L++ + P+              F   + R                   + ++  +YV+D++I G   EK++  K  +S++F +KDLG   ++LG+ + RD  NG   +SQ  Y+++VL  +  +E + V T
Sbjct:  676 GEPKCYNEALQDENSSKWELAMKDEMDSLLGNQTWELTE---LPXGKKALHNKWVYKIKNEHDGS-KRYKVRLVVKGFQQKEGIDYTEIFSPVVKMSTIRVVLGMVAAENLRLEQLBVKTAFLHGDLEEDLYM-IQPEXXIVQGQENLWYKKFDNFMHRIGFKRCEADHCCYVKSFDNSYIILLLYVBDMLIXGSDIEKINNLKKQLSKQFAMKDLGXAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVST 931          
BLAST of mRNA_H-paniculata_contig43371.11058.1 vs. uniprot
Match: A0A0V1HEM8_TRIPS (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Trichinella pseudospiralis TaxID=6337 RepID=A0A0V1HEM8_TRIPS)

HSP 1 Score: 141 bits (355), Expect = 3.380e-35
Identity = 89/253 (35.18%), Postives = 136/253 (53.75%), Query Frame = 0
Query:    2 QGEPKSAAEALKRPEAEKLRAAMEEEWGTLVDNGTWENEDPGRLPAGRKAIRTKWIFKRKLEDDGSVARYKTRLVVQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEGMDVDAAYSNAPVEEELF----------------------VKLHPDFSPLLPRHTTNLLAAVYVDDLVIAGRREKV-DEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDTTISQGSYIREVLKIYGFDECRGVPT 231
            Q +P S  EA+ RP+A++   A+ EE  +  +N +WE   P  LP  +K I++KW+FK K ++DG++ + K RLV +G+SQ++G D   T A     S+LR   SLAA+++ E++ MDV  A+ N  + EE++                      +K  P     L ++   L   VYVDDL+I    E   +E K  + +RF+IKDLG     LGI + +D  NG  +I Q  YI E+L  +   +C+GV T
Sbjct:  149 QSDPISYEEAVNRPDAKEWLKAINEELASHRENQSWE---PAVLPPHKKVIKSKWVFKTKYKEDGTIEKRKARLVARGYSQLQGIDYEGTFAPTLGYSSLRYLLSLAAKNNLEVDQMDVVTAFLNLSLNEEIYREASRAWYGELDDTLRSFGLNRLKKEPCIY-FLRKNKIFLAVGVYVDDLLILSNNESAKNELKIALCKRFKIKDLGKAHWCLGIRIVQDVENGTQSIDQEQYIEEMLHRFKMSDCKGVKT 397          
BLAST of mRNA_H-paniculata_contig43371.11058.1 vs. uniprot
Match: A0A2N9HQ47_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HQ47_FAGSY)

HSP 1 Score: 142 bits (358), Expect = 3.670e-35
Identity = 86/244 (35.25%), Postives = 137/244 (56.15%), Query Frame = 0
Query:    4 EPKSAAEALKRPEAEKLRAAMEEEWGTLVDNGTWENEDPGRLPAGRKAIRTKWIFKRKLEDDGSVARYKTRLVVQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEGMDVDAAYSNAPVEEELF--------VKLHP------DFSPLLPRHTTNLLA-AVYVDDLVIAGR-REKVDEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDTTISQGSYIREVLKIYGFDECRGVPT 231
            EP S +EAL  P+ ++   AM+EE  ++  N  WE  D   LP GRK I  KW+ K K + DGS+ RYK RLV +G++Q EG D  +T + V R +++R   S+ A+ D EL  MDV  A+ N  ++EE++        VK H       D    L R   ++L  ++YVDD+++AG   + +   K  +S  F +KD+G  + VLG+++ RD      ++SQG+YI+++L+ +     + + T
Sbjct:  585 EPASFSEALHSPDRDEWMTAMQEEMSSMDKNNVWELVD---LPPGRKTIGNKWVLKVKRKADGSIDRYKARLVAKGYTQREGIDYEDTFSPVVRFASIRLILSIVAKQDLELFQMDVKTAFLNGELDEEIYMAQPEGFEVKGHERKMIEEDHCVYLKRSKRSILILSLYVDDILLAGNDMDSIVTTKKWLSSTFEMKDMGEANFVLGVKITRDRSKKLLSLSQGTYIKKILERFHMHNSKPIDT 825          
BLAST of mRNA_H-paniculata_contig43371.11058.1 vs. uniprot
Match: A0A2N9IQ42_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IQ42_FAGSY)

HSP 1 Score: 142 bits (358), Expect = 3.680e-35
Identity = 83/244 (34.02%), Postives = 136/244 (55.74%), Query Frame = 0
Query:    4 EPKSAAEALKRPEAEKLRAAMEEEWGTLVDNGTWENEDPGRLPAGRKAIRTKWIFKRKLEDDGSVARYKTRLVVQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEGMDVDAAYSNAPVEEELFVK--------------LHPDFSPLLPRHTTNLLA-AVYVDDLVIAGR-REKVDEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDTTISQGSYIREVLKIYGFDECRGVPT 231
            EP S +EAL  P+ ++   AM+EE  ++  N  WE  D   LP GRK I  KW+ K K + DGS+ RYK RLV +G++Q EG D  +T + V R +++R   S+ A+ D EL  MDV  A+ N  ++EE+++               +  D    L R   ++L  ++YVDD+++AG   + +   K  +S  F +KD+G  + VLG+++ RD      ++SQG+YI+++L+ +     + + T
Sbjct:  729 EPASFSEALHSPDRDEWMTAMQEEMSSMDKNNVWELVD---LPPGRKTIGNKWVLKVKRKADGSIDRYKARLVAKGYTQREGIDYEDTFSPVVRFASIRLILSIVAKQDLELFQMDVKTAFLNGELDEEIYMAQPAGFEAKGHERKMIEEDHCVYLKRSKRSILILSLYVDDILLAGNDMDSIVTTKKWLSSTFEMKDMGEANFVLGVKITRDRSKKLLSLSQGTYIKKILERFHMHNSKPIDT 969          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig43371.11058.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
G4TMG6_SERID4.750e-4035.22Uncharacterized protein n=1 Tax=Serendipita indica... [more]
A0A4S4M1D7_9APHY1.700e-3630.40Integrase catalytic domain-containing protein (Fra... [more]
A0A6L2LES7_TANCI2.030e-3635.42Zinc finger, CCHC-type n=1 Tax=Tanacetum cinerarii... [more]
A0A8J5ZIB2_9ROSI4.320e-3639.51Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A438C2R4_VITVI5.920e-3635.68Copia protein n=1 Tax=Vitis vinifera TaxID=29760 R... [more]
G4TTI1_SERID1.330e-3534.50Related to retrotransposon HobS hobase (N-terminal... [more]
A5AK46_VITVI2.000e-3533.33Integrase catalytic domain-containing protein n=1 ... [more]
A0A0V1HEM8_TRIPS3.380e-3535.18Retrovirus-related Pol polyprotein from transposon... [more]
A0A2N9HQ47_FAGSY3.670e-3535.25Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9IQ42_FAGSY3.680e-3534.02Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 45..141
e-value: 6.2E-23
score: 81.7
coord: 150..229
e-value: 5.5E-14
score: 52.4
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..146
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 2..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig43371contigH-paniculata_contig43371:149..998 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig43371.11058.1mRNA_H-paniculata_contig43371.11058.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig43371 149..998 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig43371.11058.1 ID=prot_H-paniculata_contig43371.11058.1|Name=mRNA_H-paniculata_contig43371.11058.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=233bp
IQGEPKSAAEALKRPEAEKLRAAMEEEWGTLVDNGTWENEDPGRLPAGRK
AIRTKWIFKRKLEDDGSVARYKTRLVVQGFSQVEGEDCFETSARVARMST
LRTGFSLAAEHDFELEGMDVDAAYSNAPVEEELFVKLHPDFSPLLPRHTT
NLLAAVYVDDLVIAGRREKVDEFKHNISQRFRIKDLGSLSRVLGIEVRRD
HPNGDTTISQGSYIREVLKIYGFDECRGVPTL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like