mRNA_H-paniculata_contig4335.11054.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4335.11054.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 457 bits (1175), Expect = 1.720e-137 Identity = 279/711 (39.24%), Postives = 407/711 (57.24%), Query Frame = 3
Query: 102 MAANVRTTAFQVATIASQLLLSTASVVKEVATLTKEFPWVGPAIKTLNAIQEMADATERNKEQLARLCERCAYIMAGVVIKCQRTPNRMDVQPLMKHLDDVETLMKRCGHQGKMKNFRDRDKIKSDIAKLYGKMGDLIGDMGLTGIVML------DTKV---------EELQRSQGRCHTELMAKINEQTDQLTTVTKLLQPLPAPKQAKVPNGTPIRQSWYVPRKRALEEVRDSLSHNGRPRMVGLVGGSGAGKTTMACEVAWDEGVRDFFSDGVLWFPVNKDAKDNLRQLMEKLATMVYENIMGYSGNERGDSEDSASYINEQMSEKDGKPGLKCLLIADNVWEAKVVTELQRTGMWLLVTTREERLVKHCGGTAIAIGKMSQEDALSVLSKSSGIPFGARLPDDIAEQLMALCGNVAMDLAFVGRWGSVRSRNDRLAWSDVVNNINTELAAMGTSTSEATTKEIRANQRMAILRAGLRYL--GAEHEHVQWLYLALSVMPDGYLFSLPDVAVLLFDRKSNTDDERVAAEIVTTLERWSVVRAWGQRYRMHDAHSKFSRGCLREREDVRRLAVRRRVDHLSSLDFIFNATPEDALGPWSLWMQWLSVMKVQDEDMFVGRVYDEQLSAMSNLDPARHRKALRAVSWLCMFEGDKEGEYSVVQRLLNVEQ------SIHRVNTLTRLAQLADSLVKVVEAEEWYQKAEDTL 2165
MAA V +VA IAS++ + A V++ VA L +E P + P ++TL I+E + +RN E L L +RC YI A ++KC+ +DV PL ++ VE ++R +GK+ K DI +L ++ DL GD+ L GI L D K E + + Q H EL+AK T+ + L P P K A VP GTP +SW+V R+ E V +L +G P +VGLVG SGAGKTT A + VR+ FSDG++W PVN+ DNL LM +LA MV+E+I G G S+D +Y+ +Q+ G GLKCL++ADNVWE+ VV++L TGMW+L++TR+E LVK G + + ++S+ +A SVL +++ + ARLPDD A+ L+ LCG VAMDLAFVGRW +VR R DR AWSD + E+ G + +++ R N+R AIL+AG L G++ E VQ LYL+L+V+PDG+ F++ D AVLL+DR+ T+DE +V LERW+++R+ YRMHDAHS F+R L +R DVRR A++R V +SSL+ + + + ++L W V +V + R Y++ L A+ + R+ + AV+W + D G +RLL VE+ + +NT LA+ A+ V EA+EW++K L
Sbjct: 1 MAAYVADATGEVAKIASKMGSAAADVIQFVADLGEELPLLQPVLRTLRIIREKVETVKRNPEDLTVLHQRCTYITACFIVKCRHGYTELDVAPLEDCVNAVEKFVERYRKRGKISRVLKAVGDKGDIVQLKERLRDLEGDLSLAGIASLAKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTE-------TILRQL-PKPPAKVANVPKGTPTHKSWHVERRNVTETVFQALDADGGPHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGSDDGLAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDD-AKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEMDKGGVTAESNGSEDSRVNRRRAILQAGFEDLAIGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLLYDREPGTEDEASVGGVVEALERWTIIRSVEATYRMHDAHSNFARESLMDRGDVRRPAIKRLVRSISSLEALRS------INRYTLKHLWAGVQRVGGDGWATTRPYEKALEALDESNSPLFRETIEAVAWFQEAQEDWTGANRTWRRLLAVEEVQLGADHPYVLNTYHCLARCAEHQDNVEEAKEWHRKQHQAL 696
BLAST of mRNA_H-paniculata_contig4335.11054.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI) HSP 1 Score: 451 bits (1161), Expect = 6.500e-136 Identity = 298/785 (37.96%), Postives = 436/785 (55.54%), Query Frame = 3
Query: 102 MAANVRTTAFQVATIASQLLLSTASVVKEVATLTKEFPWVGPAIKTLNAIQEMADATERNKEQLARLCERCAYIMAGVVIKCQRTPNRMDVQPLMKHLDDVETLMKRCGHQGKMKNFRDRDKIKSDIAKLYGKMGDLIGDMGLTGIVMLDTKVEELQRSQGRCHTELMAKINEQTDQLTTVTKLLQPLPAP--KQAKVPNGTPIRQSWYVPRKRALEEVRDSLSHNGRPRMVGLVGGSGAGKTTMACEVAWDEGVRDFFSDGVLWFPVNKDAKDNLRQLMEKLATMVYENIMGYSGNERGDSEDSASYINEQMSEKDGKPGLKCLLIADNVWEAKVVTELQRTGMWLLVTTREERLVKHCGGTAIAIGKMSQEDALSVLSKSSGIPFGARLPDDIAEQLMALCGNVAMDLAFVGRWGSVRSRNDRLAWSDVVNNINTELAAMGTSTSEATTKEIRANQRMAILRAGLRYL--GAEHEHVQWLYLALSVMPDGYLFSLPDVAVLLFDRKSNTDDERVAAEIVTTLERWSVVRAWGQRYRMHDAHSKFSRGCLREREDVRRLAVRRRVDHLSSLDFIFNATPEDALGPWSLWMQWLSVMKVQDEDMFVGRVYDEQLSAMSNLDPARHRKALRAVSWLCMFEGDKEGEYSVVQRLLNVEQ----SIHR--VNTLTRLAQLADSLVKVVEAEEWYQKAEDTLIKAVRQYEE------GGDYQDALFDELEQVAWIMQSKERWDRA--ERLLVQLLRFQERKFGEASVPVCSTLSNLAYNVDALGRPKEA 2402
M A++ +A + A +A ++ + + V L +E P + P KTL AI+ + + N+E+LA L +RC YI A V+KC+ + +DV PL ++ + +RC +GK+ KS+IA L + L D+GL GI +L+ KV++++++ L + + L+ LP K A VP G P+R+SW+V R+ A+ V D+L+ + R +V L G SG+GKTT+A E+ VR+ FSDG++W PVN+ AK L LM +LA MV+E I G G SEDSA+YI +++ E LKCL++ADNVWE VV++L TGMW+L++TR+E +VK G A+ + ++SQ DA SVL +++ +P +RLPDD A L+ LCG VAMD+AFVGRW +VR R+D +WSD + I TE+ +G + + I A +R AIL+ G L G++ E VQ LYL+L+VMPDG+ FSL D AVLL+DR +T+DE A +V LERWS++R+ YRMHDAH+ F+R CL +R VRR A++R +LSSLD + + G W L++ ++ + R Y++ L M D A R AV W + D EG + +RLL VE+ + H +NT LA A+ L + EA +W++K + L A+ + D DA D L VA DRA E LL + L +E G + V TL L + GR EA
Sbjct: 1 MVADISDSAAEAARLALEIGSTISDAVSCAVDLGEELPVIKPVFKTLKAIRTTVETVKNNREELAALEQRCTYITACFVVKCRLIESEVDVAPLKDCVEAAKNFAERCSRRGKVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGIAVLEGKVDDMKKT------------------LDRIDQRLESLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDALNGSDRACVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEIGGSVGRVPSASEDSATYIKQRLEEGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDD-AVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEMEKVGHDPDNDSAENIPAKRRKAILQGGFEDLAIGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLLYDRSPSTEDEASAGGVVDVLERWSIIRSAQGTYRMHDAHTDFARECLLDRGHVRRPALKRWTRYLSSLDILRSTDRYVLKGLW------LAIERLGGDGWGKTRPYEKALGMMLESD-ALLRTTAEAVGWFQEAQEDLEGASASWRRLLEVEKRELGADHPFVLNTYGNLAIWAERLGNIEEAAKWHEKEVEGLPLALARMNALVRSGLEADLDDA--DSLSSVAATALEFRPGDRALAETLLRRSLDVKEAILGPEHLQVADTLRQLGVSAREAGRLDEA 757
BLAST of mRNA_H-paniculata_contig4335.11054.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE) HSP 1 Score: 411 bits (1057), Expect = 1.520e-122 Identity = 273/753 (36.25%), Postives = 406/753 (53.92%), Query Frame = 3
Query: 213 PWVGPAIKTLNAIQEMADATERNKEQLARLCERCAYIMAGVVIKCQRTPNRMDVQPLMKHLDDVETLMKRCGHQGKMKNFRDRDKIKSDIAKLYGKMGDLIGDMGLTGIVMLDTKVEELQR-------SQGRCHTELMAKINEQTDQLTTVTKLLQPLPAPKQAKVPNGTPIRQSWYVPRKRALEEVRDSLSHNGRPRMVGLVGGSGAGKTTMACEVAWDEGVRDFFSDGVLWFPVNKDAKDNLRQLMEKLATMVYENIMGYSGNERGDSEDSASYINEQMSEKDGKPGLKCLLIADNVWEAKVVTELQRTGMWLLVTTREERLVKHC-GGTAIAIGKMSQEDALSVLSKSSGIPFGARLPDDIAEQLMALCGNVAMDLAFVGRWGSVRSRNDRLAWSDVVNNINTELAAMGTSTSEATTKEIRANQRMAILRAGLRYL--GAEHEHVQWLYLALSVMPDGYLFSLPDVAVLLFDRKSNTDDERVAAEIVTTLERWSVVRAWGQRYRMHDAHSKFSRGCLREREDVRRLAVRRRVDHLSSLDFIFNATPEDALGPWSLWMQWLSVMKVQDEDMFVGRVYDEQLSAMSNLDPARHRKALRAVSWLCMFEGDKEGEYSVVQRLLNVEQSI------HRVNTLTRLAQLADSLVKVVEAEEWYQKAEDTLIKAVRQYE---EGGDYQDALFDE--LEQVAWIMQSKERWDR--AERLLVQLLRFQERKFGEASVPVCSTLSNLAYNVDALGRPKEA 2402
P + P +KTL A+ A L +RC YI V+++C++ + + PLM+ ++ V ++RC +G + K +IA L ++ DL GD+ L GI + KVE+L+ Q H++ +A + ++ + L A VP GTP R+SW+V R+ + V D+L G PR+VGLVG SG+GKTT A E+ VR+ FSDG++W VN A + LR LM LA +V+E+I G G +D A+Y ++M G GLKCL++ADNVWE V+++L TGMW+L++TR+E LV+ GG + + ++S+EDA+SVL ++S + RLPD+ E L+ LCG VAMD+AFVGRW +VR R+DR AWSD + + +++ S + +IRA +R A+L+AG L G++ E + LYL+L+V+PDG+ F+ D LL+DR +DE E++ TLERWS +R G YRMHDAHS F+R C+ +R VR+ AV+R LSSLD + + P+ L WL+V ++ E R Y LS M +P K+L+++ W +GD + +R+L V++ H + TL L A+ L E EW + L AV + + + G+ D + D L +A M + DR AE L+ L QE K G V V L +L +V GR EA
Sbjct: 24 PLIEPVLKTLKAVXXXXXXXXXXXXXXAALYQRCTYITGCVIVRCRKGSSGLKATPLMECVNAVGAFVERCSRRGMLSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHSQTLANHDIMFARVGISPETL--------ATVPAGTPARKSWHVERRHVMRAVCDALPGEGGPRLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVNDGATERLRALMMHLARVVFEDIGGSVGRRPAGLDDGAAYTRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVE-LVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAAHKVRSKIERSRVSDN---VWDIRAVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEVSTEELIRTLERWSALRTEGGAYRMHDAHSGFARDCVMDRGYVRKPAVKRWTLRLSSLDVLRSFD-----DPFVLKGLWLAVGRLGGESWRNVRPYAAALSEMDESNPLL-LKSLQSLGWFQDAQGDWQSASDTCRRILAVKRRQLGADHPHTILTLRALVYCAERLGNAEEMTEWQAELRRVLPLAVVRMQLRLDAGEV-DGVDDANALNSIASTMLNLAPDDRGNAEALMRHSLEIQEVKLGRDDVYVAYNLHHLGVSVHLAGRLDEA 757
BLAST of mRNA_H-paniculata_contig4335.11054.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI) HSP 1 Score: 410 bits (1054), Expect = 1.390e-120 Identity = 255/626 (40.73%), Postives = 359/626 (57.35%), Query Frame = 3
Query: 213 PWVGPAIKTLNAIQEMADATERNKEQLARLCERCAYIMAGVVIKCQRTP-NRMDVQPLMKHLDDVETLMKRCGHQGKMKNFRDRDKIKSDIAKLYGKMGDLIGDMGLTGIVMLDTKVEELQRSQGRCHTELMAKINEQTDQLTTVTKLLQPLPAPKQAKVPNGTPIRQSWYVPRKRALEEVRDSLSHNGRPRMVGLVGGSGAGKTTMACEVAWDEGVRDFFSDGVLWFPVNKDAKDNLRQLMEKLATMVYENIMGYSGNERGDSEDSASYINEQMSEKDGKPGLKCLLIADNVWEAKVVTELQRTGMWLLVTTREERLVKHCGGTAIAIGKMSQEDALSVLSKSSGIPFGARLPDDIAEQLMALCGNVAMDLAFVGRWGSVRSRNDRLAWSDVVNNINTELAAMGTSTSEATTKEIRANQRMAILRAGLRYL--GAEHEHVQWLYLALSVMPDGYLFSLPDVAVLLFDRKSNTDDERVAAEIVTTLERWSVVR--------AW-GQRYRMHDAHSKFSRGCLREREDVRRLAVRRRVDHLSSLDFIFNATPEDALGPWSLWMQWLSVMKVQDEDMFVGRVYDEQLSAMSNLDPARHRKALRAVSWLCMFEGDKEGEYSVVQRLLNV 2054
P + P +KTL AI+E + + N+E+L L RC Y+ A VV+K +++ + MD+ P+ + L+ L++RCG +GKM + K +IA++ + DL D+ L G+ +L+ K +L R T A ++ L PA K AK+P TPIR+SW+V R +E V ++L+ G P +VGLVG SG+GKTT A E+ VR FSDGV+W VN AKD L LM +LA M+ E + G S+D A+YI E+M G GLKCL++ADNVWE +VV +L TGMW+L++TR+E LV G + + +MS+ +A SVL K+S +P RLPDD A L+ LCG VAMDLAFVGRW +VR R+DR AWSD + E+ + T E R +R A+L+AG L G++ E VQ LYL+L+V+PDG F++ D AVLL+DRK + +DE AA +V LERWSV+R AW G Y +HDAHS F+R L +R DVRR A+ R ++SSLD + + D W L V +V + R Y+ L+ M + DP + AV+ E D E + +RLL++
Sbjct: 45 PHLRPVLKTLTAIRETVENVQNNQEELQTLYRRCVYLTACVVVKSRQSSCSEMDLTPVEECLEAAGELVERCGGRGKMTRVLNASSDKEEIARMKANIRDLEADLSLAGVAILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPA-KLAKIPKATPIRKSWHVERLYVMERVFEALTAVGGPHLVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHGAKDRLPSLMLQLAHMMCEEV---GGRRPATSDDGAAYIKEKMQRGHGGKGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDD-AVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEMGKIEGERVSGTVVETRDARRKAVLQAGFEDLASGSDDERVQRLYLSLAVLPDGRGFTVKDAAVLLYDRKPSAEDEASAAGVVEILERWSVLRSIRGCYRMAWRGGHYVLHDAHSDFAREKLMDRGDVRRPALVRWTRNISSLDTLRSVRWHDVRDLW------LGVEQVGGDGWKSTRPYEAALAGMEDSDPLLPTSVV-AVAKFQRHEEDWEEAIATCRRLLDM 658
BLAST of mRNA_H-paniculata_contig4335.11054.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE) HSP 1 Score: 371 bits (953), Expect = 2.340e-107 Identity = 239/617 (38.74%), Postives = 342/617 (55.43%), Query Frame = 3
Query: 597 ELMAKINEQTDQLTTVTKLLQPLPAPKQAKVPNGTPIRQSWYVPRKRALEEVRDSLSHNGRPRMVGLVGGSGAGKTTMACEVAWDEGVRDFFSDGVLWFPVNKDAKDNLRQLMEKLATMVYENIMGYSGNERGDSEDSASYINEQMSEKDGKPGLKCLLIADNVWEAKVVTELQRTGMWLLVTTREERLVKHCGGTAIAIGKMSQEDALSVLSKSSGIPFGARLPDDIAEQLMALCGNVAMDLAFVGRWGSVRSRNDRLAWSDVVNNINTELAAMGTSTSEATTKEIRANQRMAILRAGLRYL--GAEHEHVQWLYLALSVMPDGYLFSLPDVAVLLFDRKSNTDDERVAAEIVTTLERWSVVRAWGQRYRMHDAHSKFSRGCLREREDVRRLAVRRRVDHLSSLDFIFNATPEDALGPWSLWMQWLSVMKVQDEDMFVGRVYDEQLSAMSNLDPARHRKALRAVSWLCMFEGDKEGEYSVVQRLLNVEQS------IHRVNTLTRLAQLADSLVKVVEAEEWYQKAEDTLIKAVRQYE--------EGGDYQDALFDELEQVAWIMQSKERWDRAERLLVQLLRFQERKFGEASVPVCSTLSNLAYNVDALGRPKE 2399
E +KI + DQL+ L KVP GTP R+SWYV R+ ++ V + L+ +G PR+VGLVGGSG+GKTT+A E V++ FSDG+ W VN AK+ L LM +LA +VYE+I G S+D A+YI ++M + G LKCL++ADNVWE +VV++L TGMW+L++TR LV G + + ++S+ DA+SVL +++ +P ++P D A L+ LCG VAMDLAFVGRW +VR R DR+AWSD V+ + E+ +G+ + E R +R AILRAG L G++ E VQ LYL+L+V PDG+ F++ D AVLL+DR+ +DE A +V TLERW+V+R+ YRMHDAHS F+R L + VRR AV+R V +S L+ + ++ P G W L+V V + R Y L M L A R+ + A++ L D EG + +RLL +E+ H + + LA A+ L +V EA +W K + L A+ + + EG D + L + +AE LL + L QE G + V TL L + GR +E
Sbjct: 14 ENQSKILDHMDQLSKTQAKL--------TKVPKGTPARKSWYVKRRHVMDTVFEGLASDGGPRLVGLVGGSGSGKTTVASESVRSTEVQEAFSDGIAWLSVNDGAKERLSSLMLQLARVVYEDIGCSVGRRPTSSDDCAAYIRQRMKKGTGGKKLKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGD-AVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKVREEMGKVGSGDASEKLAETRDARRKAILRAGFEDLAIGSDDERVQRLYLSLAVFPDGHAFTVRDAAVLLYDREPCAEDEASVAVVVDTLERWTVLRSEQGAYRMHDAHSIFARETLMDHGYVRRPAVKRWVSSISCLEVLRSSDPYVLKGLW------LAVEGVGGDGWLKSRAYSAALVGMDRLHSALARQNIIALARLQEAHEDWEGASTTWRRLLEIEKKQLGADHYHVLKSYRSLASCAEQLGQVGEAADWRGKEVEALPLALARVQSQTDSGKVEGLDGANGLASVASTMLKFKPGSIDRAQAEVLLRRSLEIQEAALGHEDIAVADTLYQLGICLREAGRLEE 615
BLAST of mRNA_H-paniculata_contig4335.11054.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE) HSP 1 Score: 321 bits (823), Expect = 1.110e-92 Identity = 218/577 (37.78%), Postives = 312/577 (54.07%), Query Frame = 3
Query: 249 IQEMADATERNKEQLARLCERCAYIMAGVVIKCQRTP--NRMDVQPLMKHLDDVETLMKRCGHQGKMKNFRDRDKIKSDIAKLYGKMGDLIGDMGLTGIVMLDTKVEELQRSQGRCHTELMAKINEQTDQLTTVTKLLQPLPAPKQAKVPNGTPIRQSWYVPRKRALEEVRDSLSHNGRPRMVGLVGGSGAGKTTMACEVAWDEGVRDFFSDGVLWFPVNKDAKDNLRQLMEKLATMVYENIMGYSG---NERGDSEDSASYINEQMSEKDGKPGLKCLLIADNVWEAKVVTELQRTGMWLLVTTREERLVKHCGGTAIAIGKMSQEDALSVLSKSSGIPFGARLPDDIAEQLMALCGNVAMDLAFVGRWGSVRSRNDRLAWSDVVNNINTELAAMGTSTSEATTKEIRANQRMAILRAGLRYL--GAEHEHVQWLYLALSVMPDGYLFSLPDVAVLLFDRKSNTDDERVAAEIVTTLERWSVVRA-WGQRYRMHDAHSKFSRGCLREREDVRRLAVRRRVDHLSSLDFIFNATPEDALGPWSLWMQWLSVMKVQDEDMFVGRVYDEQLSAMSNLDP 1955
++E + + +++LA L +RC Y+ A ++ K + + +V PL + + E F +R K ++ +E++ ++Q EL+A D+L P P K+A VP GTP R+SW+V R E V ++L+ PR+VGLVG SGAGKTT A E+ VR+ FSDG++W VN A L LM +LA MV E+I G G NE G + D+ YI ++M G GLKCL +ADNVWE +VV+ L +TGM +L++TR E LV G + + ++S DA SVL ++ +P RLPDD A L+ LCG VAMDLAFVGRW +VR R+DR+AWSD + E+A + + R N+R AIL+AGL L G++ E VQ LYL+L+V+PD + D A+LL+DR +DE A ++ LERWSV+R+ W +Y MHD S+F+R L +R DVRR A+RR V ++SSLD + + + L QWL V KV E + L+ M + +P
Sbjct: 1 MRETVETVYQTRDELAALEKRCTYMTACIIAKFRHAHPGSAPNVSPLEDCVMEAE-------------KFVERRKKRT---------------------------MEQMVQNQAAARKELLANQEIIIDRL--------PKPPIKKAYVPQGTPTRKSWHVER-HVTETVVEALTGEAGPRLVGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYGANKRLPSLMLQLARMVQEDIGGRVGGHPNESGGNADA--YIKQRMENGHGGKGLKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARGVPVRLDELSARDAESVLRSAAELPPAVRLPDD-AVDLIDLCGRVAMDLAFVGRWSTVRGRHDRVAWSDAAAKVRAEIAKIE---GDDIVDGARGNRRKAILQAGLEDLAIGSDDERVQRLYLSLAVLPDDQGIQVHDAALLLYDRDPTAEDEESVARVLDVLERWSVLRSTWAYKYYMHDVQSEFARASLMDRGDVRRHALRRWVGYISSLDTVRSYNAD------YLKHQWLDVEKVGGEGWDETHPCETALAEMDDPEP 516
BLAST of mRNA_H-paniculata_contig4335.11054.1 vs. uniprot
Match: A0A6H5JSI2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI2_9PHAE) HSP 1 Score: 281 bits (719), Expect = 1.620e-73 Identity = 204/602 (33.89%), Postives = 312/602 (51.83%), Query Frame = 3
Query: 213 PWVGPAIKTLNAIQEMADATERNKEQLARLCERCAYIMAGVVIKCQRTP-NRMDVQPLMKHLDDVETLMKRCGHQGKMKNFRDRDKIKSDIAKLYGKMGDLIGDMGLTGIVMLDTKVEELQRSQGRCHTELMAKINEQTDQLTTVTKLLQPLPAPKQAKVPNGTPIRQSWYVPRKRALEEVRDSLSHNGRPRMVGLVGGSGAGKTTMACEVAWDEG--VRDFFSDGVLWFPVNKDA--KDNLRQLMEKLATMVYENIM-GYSGNERGDSEDSASYINEQMSEKDGKPGLKCLLIADNVWEAKVVTELQRTGMWLLVTTR-------EERLVKHCGGTAIAIGKMSQEDALSVLSKSSGIPFGARLPDDIAEQLMALCGNVAMDLAFVGRWGSVRSRN----DRLAWSDVVNNINTELAAMGTSTSEATTKEI--RANQRMAILRAGLRYLGAEHEHVQWLYLALSVMPDGYLFSLPDVAVLLFDRKSNTDDERVAAEIVTTLERWSVVRA-WGQRYRMHDAHSKFSRGCLREREDVRRLAVRRRVDHLSSLDFIFNATPEDALGPWSLWMQWLSVMKVQDEDMFVGRVYDEQLSAMSNLDPA 1958
P V P L + + DA RNKE+L L ERC I V+ K + + + +DV+PL + +D ++ + +R +G++ + DI +L ++ D++ MGL+G+V K++++ +A++ P PK A VP P +S++V R ++ V L +G P M L GGSGAGKTT A + + G VR F DGV+W V ++A D L LM LA ++E++M G GD D SY+ + +S++ L+CL++AD+VWEA VV +L+ TGMW+L+TTR EER+V + + +A VL ++ +P G RL D + +++ +CG VAMD AFVG W SVR+ N AW V + ++ + T E RA R+A+LRAG +Y+G E Q LY+ L+V P+G+LF D AVLL ++E VA ++ LERW V+R ++YR HDAH+ F+R L +R D+R AV R +H+S LDF + + L W ++ +V + + R YD+QL M +PA
Sbjct: 38 PVVAPLCTALLKAKGVVDAASRNKEELEELHERCEMITIQVIDKAKASKTSTIDVKPLQECVDKLKEVAERYHDRGRLARLAQFRRDGEDIQRLRKRIEDVVPIMGLSGVVNNGEKLDQI-----------LARLQ----------------PGPKLAPVPKKAPFTKSFHVVRDGVVDRVCKILGGDGGPAMAALTGGSGAGKTTSAAAMVGERGDRVRALFPDGVVWLWVGREAGTADRLPSLMSNLAKRLHEDVMKGAVDAPTGD--DGVSYVRKIVSQEK----LRCLVVADDVWEASVVQKLRETGMWVLLTTRFPEMGEPEERVV---------MDTLIPAEAEDVLRGAAELPLGERLCD-ASMKVLEICGRVAMDTAFVGSWTSVRTTNGVPKSNKAWERTVEELTAQIDHVRGQMKVGNTGEDNDRAINRLAVLRAGFKYIGREDPLAQELYVKLAVFPEGFLFGESDAAVLL-------ENEEVAKGPISILERWGVLRTDASEKYRTHDAHADFARKKLMDRNDLREPAVERWTEHISRLDFAVG------VEIFVLLPMWRALEEVGGKGWWALRPYDDQLIQMVTSNPA 583
BLAST of mRNA_H-paniculata_contig4335.11054.1 vs. uniprot
Match: A0A6H5KU40_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU40_9PHAE) HSP 1 Score: 263 bits (671), Expect = 4.350e-69 Identity = 246/812 (30.30%), Postives = 390/812 (48.03%), Query Frame = 3
Query: 204 KEFPWVGPAIKTLNAIQEMADATERNKEQLARLCERCAYIMAGVVIKCQRTPNRMDVQPLMKHLDDVETLMKRCGHQGKMKNFRDRDKIKSDIAKLYGK-MGDLIGDMGLTGIVMLDTKV-------EELQR------SQGRCHTELMAKINEQTDQLTT-----VTKLLQPLPAPK----QAKVPNGTPIRQSWYVPRKRALEEVRDSLSHNGRPRMVGLVGGSGAGKTTMACEVAWDEGVRDFFSDGVLWFPVNKDAKDNLR--QLMEKLATMVYENI---MGYSGNERGDSED--SASYINEQMSEKDGKPGLKCLLIADNVWEAKVVTELQRTGMWLLVTTREERLVKHCGGTAIAIGKMSQEDALSVLSKSSGIPFGARLPDDIAEQLMALCGNVAMDLAFVGRWGSVRSRNDRLAWSDVVNNINTELAAMGTSTSEATTKEIRANQRMAILRAGLRYLGAEHEHVQWLYLALSVMPDGYLFSLPDVAVLLFDRKSNTDDERVAAEIVTTLERWSVVRAWGQ--RYRMHDAHSKFSRGCLRER------EDVRRLAVRRRVDHLSSLDFIFNATPEDALGPWSLWMQWLSVMKVQDEDMFVGRVYDEQLSAMSNLDPARHRKALRAVSWLCMFEGDKEGEYSVVQRLLN---VEQSIHRVNTLTRLAQLADSLVKVVEAEEWYQKAEDTLIKAVRQYEEGGDYQDALFDELEQVAWIMQSKERWDRAERLL---VQLLRFQERKFGEA------SVPVCSTLS----NLAYNVDALGR-------PKEAVKFLERRLRIEESELGSD 2456
KE ++ P L +++ D +RN+++LA L E C I VV+KC N +DV PL + +DD+E L+ +G F + D S++ + GK + +L+ M L V++ +V E+L+R ++ C L+AK ++ T + +LQ LPAP+ QA P G + +V R+ + V + P MV LVG SGAGKT+ A E+A +R+ F DG++W + A D+ R + M LAT V+E++ +G S + + + +A+YI +M + + GLKCL++AD+VWE +V+ L+++GM L+T+R+ L + GG A+ + +++E+ + +L K++ + G P++ A +++ LC VAM+L FVGR +RS+ D W N I +E+ A + + +R I R G + G+ + LYL+L ++P+GY F + D ++LLF D E A ++V LERW+VVR YRMHDAHS+F+R L DVR LAVRR HLS L + + L L W +V V + R Y QL ++ + D A + ++ L EGD + Q +L+ + + +H +L D L AE+ E LI+ + DAL DE W Q + D AE L + L R R+ E C LS L+Y + LGR P+EA++ R L ++E G+D
Sbjct: 3 KEIGFLQPVCAALGRMKDSWDEIQRNEDRLAELYELCEVITCFVVVKCDGGRNNIDVTPLSECVDDLEALVADYSRRGLCSKFCNPD---SEVIEQLGKRIENLVHVMELAATVVVSEQVGGVNAAVEDLRRQLEINWARNEC---LLAKHETMLEECTKNIERGIKSVLQQLPAPQAERDQAPEPKGV-WKPEDHVIRRHVVARVCEYFDSANSPWMVALVGRSGAGKTSTASEMALHYHLRERFPDGIVWMRCGQGAADSARLARQMFILATWVHEDVENKLGISPSAAVAAAEGTAAAYIKTRMEQGNAGRGLKCLVVADDVWEPEVLDMLRQSGMKALITSRDYELTEASGGKAVVMDHVTEEEGMLILQKAAKLRSGESPPNE-ARKILDLCNYVAMELNFVGRLSMLRSQVDGTQWLRAWNEIRSEIGAEVSDPGGDFDDWAASKRRDVIFRVGYKDFGSGDVRNKILYLSLGILPNGYAFRVSDASLLLFGACQGRDMEN-AGDVVADLERWAVVRLESSDGTYRMHDAHSEFARKILTSALGLGFAADVRELAVRRWSAHLSCLKTVLS------LDVGLLLSLWQAVDTVSCDVGIRVRSYRAQLCSIDSSDEVYFSFA-KTIAQLYYAEGDDANVVDISQIMLDRSDMAREVHPKFVAFATWRLWDKLPSHGGAEK-----EQELIRRM----------DALMDEENLQRWAPQVGDGED-AEWLHSCGLCLYRLDRREESETYFRRALQAWECLGLSAPQVQLSYTLHCLGRLAREAGRPEEAIEMFRRALVVKERAFGAD 782
BLAST of mRNA_H-paniculata_contig4335.11054.1 vs. uniprot
Match: A0A6H5KXU5_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXU5_9PHAE) HSP 1 Score: 194 bits (493), Expect = 2.930e-47 Identity = 186/653 (28.48%), Postives = 302/653 (46.25%), Query Frame = 3
Query: 192 ATLTKEFPWVGPAIKTLNAIQEMADATERNKEQLARLCERCAYIMAGVVIKCQRTPN--RMDVQPLMKHLDDVETLMKRCGHQGKMKNFRDRDKIKSDIAKLYGKMGDLIGDMGLTGIVM---LDTKVEELQRSQGRCHTELMAKINEQTDQLTTVTKLLQPLPAPKQAKVPNGTPIRQSWYVPRKRALEEVRDSL---SHNG-------RPRMVGLVGGSGAGKTTMACEVAWDEGVRDFFSDGVLWFPVNKDAKDNLRQLMEKLATMVYENIMGYSGNERGD------SEDSASYINEQMSEKDGKPGLKCLLIADNVWEAKVVTELQRTGMWLLVTTREERLVKHCGGTAIAIGKMSQEDALSVLSKSSGIPFGARLPDDIAEQLMALCGNVAMDLAFVGRWGSVRSRNDRLAWSDVVNNINTELAAMGTSTSEATTKEIRANQRMAILRAGLRYLGAEHEHVQWLYLALSVMPDGYLFSLPDVAVLLFDRKSNTDDERVAAEIVT-TLERWSVVR-----AWGQRYRMHDAHSKFSRGCLREREDVRRLAVRRRVDHLSSLDFIFNATPEDALGPWS-LWMQ--WLSVMKVQDEDMFVGRVYDEQLSAMSNLDPARHRKALRAVSWLCMFEGDKEGEYSVVQRLLNVEQ 2060
ATL +E P VG A K A +++ NK +L+ L E ++ V +C R ++ L H+ E++ C +G +K + + ++ +++ + +V+ L K++++ A++ E DQ T+ +++ P + +P+G P + WYV R + ++ L + NG +PRMVGL G GAGK+T+A V V+ FF VLW V K AKD L LM +LA V E ++ + SED A+YI E+ GK + L++AD+VW+A+V+ EL+R G W++ TTR+ L AI + ++ +E+A +L +++ + RLP A +LM C +DLA VGRWG +R R+ AW +++I A G R A+LRAGL L +++ LY AL+++P G F P+VA++L ++ AAE V TLER S++ W Y +H+ H F + R A+ R ++SS+ AL +S W+ W + KV+ E FV Y+ LSA+ + +ALR + GD + LL +++
Sbjct: 23 ATLLQETPAVGIACKAYLAFEDLVQTATSNKLELSVLGELIDLVLQRYVKRCAEREQGVRQELLSLENHIKSAESVAGLCNGKG-LKRLKQLTLCRRICNEIESVRKNVLHFCTINNLVLTSELSFKLDDV------------ARLLEAQDQ--TLKAVME---KPGRVNIPSGAPSIRDWYVERVKVEAQICHHLGIGTSNGIPSFPEEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFRGRVLWLSVGKGAKDRLPTLMFELAKTVRETVLQKMARRPREATVGINSEDGAAYIREEA----GKGDTRFLVVADDVWDAEVLAELRRAGAWVIYTTRKAELFPET--PAIRLEEVLEEEAEMMLRRAADLGEKTRLPP-AAYELMRRCDFSVLDLALVGRWGKIRGRSCERAWRAALDSIIETQRAGGDGGQ-------LLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFP-PEVALILLYGDDFSESALKAAEAVLGTLERLSILTLEENSGW---YHVHENHVDFVLDRPLAKHYTRDTALPRWRQYISSVR---------ALNTYSSAWLDKVWEKLAKVEGEG-FVRSPYNAALSAIMDDSEGELLEALRRAAEFHFCRGDWSEAFDKYSELLLIKE 629
BLAST of mRNA_H-paniculata_contig4335.11054.1 vs. uniprot
Match: D7G330_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G330_ECTSI) HSP 1 Score: 180 bits (457), Expect = 2.680e-45 Identity = 138/454 (30.40%), Postives = 227/454 (50.00%), Query Frame = 3
Query: 135 VATIASQLLLSTASVVKEVATLTKEFPWVGPAIKTLNAIQEMADATERNKEQLARLCERCAYIMAGVVIKCQR-TPNRMDVQPLMKHLDDVETLMKRCGHQGKMKNFRDRDKIKSDIAKLYGKMGDLIGDMGLTGIVMLDTKVEELQRSQGRCHTELMAKINEQTDQLTTVTKLLQPLPAPKQAKVPNGTPIRQSWYVPRKRALEEVRDSLSHNGRPRMVGLVGGSGAGKTTMACEVAWD--------------------EGVRDFFSDGVLWFPVNKDA--KDNLRQLMEKLATMVYENIMGYSGNERGDSEDSASYINEQMSEKDGKPGLKCLLIADNVWEAKVVTELQRTGMWLLVTTREERLVKHCGGTAIAIGKMSQEDALSVLSKSSGIPFGARLPDDIAEQLMALCGNVAMDLAFVGRWGSVRSRND-----RLAWSDVVNNINTEL 1412
V+ +A++++ T S++K + ++ P+VG + ++M D N+ +L +LCERC I VV K + TP ++V PL + ++E + +R G + K DI L ++ I D+ G+V +V L + Q E++A++ P PK A VP G P+ QSW+ R ++ V D L +G P + L G SGAGKTT A + + + +R FSDGV+W V K A D L LM KLA ++E ++ + G ED SY+ + + ++ LKC ++AD+VWE VV +L+ TGMW+L+T R +V+ + + ++ + +A +VL ++ +P G L D +A +++ +CG VAMD+AFVG W SVR+ ++ AW+ VV I ++
Sbjct: 9 VSIMATEVIEVTTSILK----IGEDIPFVGGLCTAVLNAKDMVDKASDNQAKLEKLCERCCGITVQVVEKLKGPTPLMVNVSPLEDCVKELEEVAERYGKKSCCTRLTHFQKDDEDIRDLEKRISTAIDDLTAAGVV----EVGNLMQQQVG---EILARLQ----------------PRPKLAPVPPGVPMGQSWHTMRDGVVDRVYDILGGDGGPAVAALGGRSGAGKTTAAAAMVGERQGPIHPLARENEEQAGTRLDRLRARFSDGVVWLRVGKGAGVADRLPLLMRKLAKALHEEVLKSYVDGPGIGEDGESYVKKIVEQE----SLKCRVVADDVWEPPVVEKLRETGMWILLTARNPSMVEP--NERVFVDRLEKMEAQNVLRGAARLPPGQSLCD-VAMKVLEVCGYVAMDIAFVGSWSSVRTVDNCAPKSSRAWAGVVAEITAQM 428 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4335.11054.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4335.11054.1 >prot_H-paniculata_contig4335.11054.1 ID=prot_H-paniculata_contig4335.11054.1|Name=mRNA_H-paniculata_contig4335.11054.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=944bp MAANVRTTAFQVATIASQLLLSTASVVKEVATLTKEFPWVGPAIKTLNAIback to top mRNA from alignment at H-paniculata_contig4335:5442..15178+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4335.11054.1 ID=mRNA_H-paniculata_contig4335.11054.1|Name=mRNA_H-paniculata_contig4335.11054.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9737bp|location=Sequence derived from alignment at H-paniculata_contig4335:5442..15178+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4335:5442..15178+ >mRNA_H-paniculata_contig4335.11054.1 ID=mRNA_H-paniculata_contig4335.11054.1|Name=mRNA_H-paniculata_contig4335.11054.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5664bp|location=Sequence derived from alignment at H-paniculata_contig4335:5442..15178+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |