prot_H-paniculata_contig43342.11052.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig43342.11052.1
Unique Nameprot_H-paniculata_contig43342.11052.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length106
Homology
BLAST of mRNA_H-paniculata_contig43342.11052.1 vs. uniprot
Match: A0A5E4GCQ9_PRUDU (PREDICTED: poly n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5E4GCQ9_PRUDU)

HSP 1 Score: 59.3 bits (142), Expect = 2.720e-8
Identity = 33/101 (32.67%), Postives = 54/101 (53.47%), Query Frame = 0
Query:    6 NTWVADPGASNHMTNNLAKMYDIRKPVTGEDVVMLGNGSIIVVEFLGKLNLIFHSPTDVPTTIQVSYLPELNFNLFSLHKI--QGNCSVLLDAAGTHIGDN 104
            N W+AD GASNH+T N++ +     P TG + + +G+G+ + +   G    I H+       + V + P++  NL S+HK     +CS++ D  G  I DN
Sbjct:   23 NIWLADSGASNHVTLNMSNLCH-SSPYTGSETLRVGDGNSLPISNTGST--ILHTSNAKFHLLNVLHTPQVAHNLLSVHKFVSDNHCSLIFDEIGVSIKDN 120          
BLAST of mRNA_H-paniculata_contig43342.11052.1 vs. uniprot
Match: A0A5E4GDL5_PRUDU (PREDICTED: poly (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5E4GDL5_PRUDU)

HSP 1 Score: 59.7 bits (143), Expect = 3.060e-8
Identity = 34/98 (34.69%), Postives = 57/98 (58.16%), Query Frame = 0
Query:    8 WVADPGASNHMTNNLAKMYDIRKPVTGEDVVMLGNGSIIVVEFLGKLNLIFHSPTDVPTTIQVSYLPELNFNLFSLHKI--QGNCSVLLDAAGTHIGD 103
            W+AD GAS+HMTN L+ M +I  P T  D + +GNG  + +  +G  +L   S   + T   + ++P+L  NL S++++    NC V+ DA+  ++ D
Sbjct:   14 WIADSGASHHMTNTLSNMTNIA-PYTSGDTIKIGNGEGLSISHIGTASL---SGLHLNT---IYHVPQLATNLLSVYQLCKDNNCWVIFDASNVYVQD 104          
BLAST of mRNA_H-paniculata_contig43342.11052.1 vs. uniprot
Match: A0A5E4FW64_PRUDU (PREDICTED: Retrovirus-related Pol poly from n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5E4FW64_PRUDU)

HSP 1 Score: 59.7 bits (143), Expect = 3.680e-8
Identity = 34/98 (34.69%), Postives = 57/98 (58.16%), Query Frame = 0
Query:    8 WVADPGASNHMTNNLAKMYDIRKPVTGEDVVMLGNGSIIVVEFLGKLNLIFHSPTDVPTTIQVSYLPELNFNLFSLHKI--QGNCSVLLDAAGTHIGD 103
            W+AD GAS+HMTN L+ M +I  P T  D + +GNG  + +  +G  +L   S   + T   + ++P+L  NL S++++    NC V+ DA+  ++ D
Sbjct:   14 WIADSGASHHMTNTLSNMTNIA-PYTSGDTIKIGNGEGLSISHIGTASL---SGLHLNT---IYHVPQLATNLLSVYQLCKDNNCWVIFDASNVYVQD 104          
BLAST of mRNA_H-paniculata_contig43342.11052.1 vs. uniprot
Match: A0A5E4G702_PRUDU (PREDICTED: Retrovirus-related Pol poly from (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5E4G702_PRUDU)

HSP 1 Score: 59.3 bits (142), Expect = 5.150e-8
Identity = 32/101 (31.68%), Postives = 56/101 (55.45%), Query Frame = 0
Query:    6 NTWVADPGASNHMTNNLAKMYDIRKPVTGEDVVMLGNGSIIVVEFLGKLNLIFHSPTDVPTTIQVSYLPELNFNLFSLHKI--QGNCSVLLDAAGTHIGDN 104
            N W+AD GASNH+T+N++ +     P TG + + +G+G+ + +      + I H+       + V ++P++  NL S+HK     +CS++ D  G  I DN
Sbjct:  116 NLWLADSGASNHVTSNMSNLGH-SSPYTGSETLRVGDGNSLPISH--TRSTILHTSNAKFHLLNVLHVPQVAHNLLSVHKFVSDNHCSLIFDEIGVSIKDN 213          
BLAST of mRNA_H-paniculata_contig43342.11052.1 vs. uniprot
Match: A0A8K0DN47_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0DN47_9COLE)

HSP 1 Score: 58.9 bits (141), Expect = 6.950e-8
Identity = 34/98 (34.69%), Postives = 52/98 (53.06%), Query Frame = 0
Query:    2 INNGNTWVADPGASNHMTNN---LAKMYDIRKPVTGEDVVMLGNGSIIVVEFLGKLNLIFHSPTD-VPTTIQ-VSYLPELNFNLFSLHKIQGNCSVLL 94
             N+  TW+AD GAS HM+N        Y+  KP      + +GNGS+I     GK+++I     D +PT +  V Y+P++ FNLFS+      C  ++
Sbjct:  285 FNDDETWIADSGASEHMSNQKEWFENYYEFDKPTE----IKIGNGSVINAHGKGKISVIAFDGQDYIPTELNDVLYVPDIKFNLFSIGAALDKCYTMM 378          
BLAST of mRNA_H-paniculata_contig43342.11052.1 vs. uniprot
Match: A0A6G0X3B5_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X3B5_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.550e-6
Identity = 34/88 (38.64%), Postives = 52/88 (59.09%), Query Frame = 0
Query:    1 AINNGNTWVADPGASNHMTNNLAKMYDIRKPVTGEDVVMLGNGSIIVVEFLGKLNLIFHSPTD-VPTTIQ-VSYLPELNFNLFSLHKI 86
            A+   N WV D GAS+H  NN +   ++ +P TG  VV   NG  + +E  G ++L  ++P+  V   +Q VSY+P L +NLFSL ++
Sbjct:  290 ALEASNEWVIDSGASDHFCNNSSWFTNL-EPSTG--VVRAANGGDMAIEGCGSIHLEMNTPSGIVEVELQNVSYMPSLQYNLFSLSRV 374          
BLAST of mRNA_H-paniculata_contig43342.11052.1 vs. uniprot
Match: A0A2P6R9W2_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6R9W2_ROSCH)

HSP 1 Score: 54.7 bits (130), Expect = 2.130e-6
Identity = 30/99 (30.30%), Postives = 56/99 (56.57%), Query Frame = 0
Query:    7 TWVADPGASNHMTNNLAKMYDIRKPVTGEDVVMLGNGSIIVVEFLGKLNLIFHSPTDVPTTIQVSYLPELNFNLFSLHKI--QGNCSVLLDAAGTHIGD 103
            TW+AD GAS H+T +L+ + ++  P TG   + +GNG+ + +  +G    + H+P+       V ++PE+  NL S+++     +C+ +L   G+ I D
Sbjct:  380 TWLADSGASQHVTPDLSHLSEVT-PYTGNAKLTVGNGNNLQIAHIGSS--LMHTPSASFKLTNVLHVPEITHNLLSVNRFVTDNDCAFVLTPTGSMIKD 475          
BLAST of mRNA_H-paniculata_contig43342.11052.1 vs. uniprot
Match: A0A8K0CH72_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0CH72_9COLE)

HSP 1 Score: 54.3 bits (129), Expect = 2.900e-6
Identity = 37/108 (34.26%), Postives = 54/108 (50.00%), Query Frame = 0
Query:    2 INNGNTWVADPGASNHMTNN---LAKMYDIRKPVTGEDVVMLGNGSIIVVEFLGKLNLIFHSPTD-VPTTIQ-VSYLPELNFNLFSLHKIQGNCSVLLDAAGTHIGDN 104
             N+  TW+AD GAS H++N        Y+  KP      + +GNGS+I     GK++LI     D +PT +  V Y+ ++ FNLFS+          LD   T + DN
Sbjct:  237 FNDDETWIADSGASEHISNQKKWFENYYEFDKPTE----IKIGNGSVINAHGKGKISLIAFDGQDYIPTKLNDVVYVQDIKFNLFSI-------GAALDKGYTMMTDN 333          
BLAST of mRNA_H-paniculata_contig43342.11052.1 vs. uniprot
Match: A0A5N5F2G3_9ROSA (Integrase catalytic domain-containing protein n=1 Tax=Pyrus ussuriensis x Pyrus communis TaxID=2448454 RepID=A0A5N5F2G3_9ROSA)

HSP 1 Score: 54.3 bits (129), Expect = 3.020e-6
Identity = 32/92 (34.78%), Postives = 49/92 (53.26%), Query Frame = 0
Query:    8 WVADPGASNHMTNNLAKMYDIRKPVTGEDVVMLGNGSIIVVEFLGKLNLIFHSPTDVPTTIQ-VSYLPELNFNLFSLHKI--QGNCSVLLDA 96
            W+AD GASNHMT +L  +  +  P    ++V   NG  + V  +G   +    P+  P  +  V Y+P+L  NL S+HK+    NC ++ DA
Sbjct:  316 WLADSGASNHMTADLQNL-SLASPYPTTELVQTANGEGLTVSHIGSSVI---KPSTYPIKLNSVLYVPQLTHNLLSVHKLCLDNNCWLIFDA 403          
BLAST of mRNA_H-paniculata_contig43342.11052.1 vs. uniprot
Match: A0A5N5G4I9_9ROSA (Integrase catalytic domain-containing protein n=1 Tax=Pyrus ussuriensis x Pyrus communis TaxID=2448454 RepID=A0A5N5G4I9_9ROSA)

HSP 1 Score: 53.1 bits (126), Expect = 7.670e-6
Identity = 30/91 (32.97%), Postives = 48/91 (52.75%), Query Frame = 0
Query:    8 WVADPGASNHMTNNLAKMYDIRKPVTGEDVVMLGNGSIIVVEFLGKLNLIFHSPTDVPTTIQVSYLPELNFNLFSLHK--IQGNCSVLLDA 96
            W+AD GA+NHMT +L+ +  +  P      V   NG  + V  +G    + H+P        V Y+P+L+ NL S+H+  +  NC ++ DA
Sbjct:  301 WLADSGATNHMTTDLSNLT-LASPYPTNKTVQTANGEGLRVSHVGST--VIHTPVHPIQLNSVLYVPKLSQNLLSVHRMCLDNNCWLIFDA 388          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig43342.11052.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A5E4GCQ9_PRUDU2.720e-832.67PREDICTED: poly n=1 Tax=Prunus dulcis TaxID=3755 R... [more]
A0A5E4GDL5_PRUDU3.060e-834.69PREDICTED: poly (Fragment) n=1 Tax=Prunus dulcis T... [more]
A0A5E4FW64_PRUDU3.680e-834.69PREDICTED: Retrovirus-related Pol poly from n=1 Ta... [more]
A0A5E4G702_PRUDU5.150e-831.68PREDICTED: Retrovirus-related Pol poly from (Fragm... [more]
A0A8K0DN47_9COLE6.950e-834.69Uncharacterized protein n=1 Tax=Ignelater luminosu... [more]
A0A6G0X3B5_9STRA1.550e-638.64Integrase catalytic domain-containing protein n=1 ... [more]
A0A2P6R9W2_ROSCH2.130e-630.30Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]
A0A8K0CH72_9COLE2.900e-634.26Uncharacterized protein n=1 Tax=Ignelater luminosu... [more]
A0A5N5F2G3_9ROSA3.020e-634.78Integrase catalytic domain-containing protein n=1 ... [more]
A0A5N5G4I9_9ROSA7.670e-632.97Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig43342contigH-paniculata_contig43342:1341..1658 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig43342.11052.1mRNA_H-paniculata_contig43342.11052.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig43342 1341..1658 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig43342.11052.1 ID=prot_H-paniculata_contig43342.11052.1|Name=mRNA_H-paniculata_contig43342.11052.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=106bp
AINNGNTWVADPGASNHMTNNLAKMYDIRKPVTGEDVVMLGNGSIIVVEF
LGKLNLIFHSPTDVPTTIQVSYLPELNFNLFSLHKIQGNCSVLLDAAGTH
IGDNLS
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