prot_H-paniculata_contig43331.11050.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig43331.11050.1
Unique Nameprot_H-paniculata_contig43331.11050.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length120
Homology
BLAST of mRNA_H-paniculata_contig43331.11050.1 vs. uniprot
Match: D7G756_ECTSI (Propionyl-CoA carboxylase, alpha subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G756_ECTSI)

HSP 1 Score: 132 bits (332), Expect = 1.080e-33
Identity = 73/104 (70.19%), Postives = 79/104 (75.96%), Query Frame = 0
Query:    4 LIQPHVSYQGHAIEARVYAEDPFRKFLPSTGSLVTYREPETCHFPSLPTGDEAGG--GGGGVRVDAGVVEGSAVSIYYDPMISKLIAHGETREVALKRLAMALD 105
            + QPHV +  HAIEARVYAEDPFRKFLPSTG LVTYREP          GD  GG  G  GVRVD+GVVEGS VS++YDPMISKLIA+GETREVAL RL  ALD
Sbjct:  378 IKQPHVPFYRHAIEARVYAEDPFRKFLPSTGPLVTYREPRVTADGD--GGDAEGGXXGADGVRVDSGVVEGSEVSMFYDPMISKLIAYGETREVALGRLGSALD 479          
BLAST of mRNA_H-paniculata_contig43331.11050.1 vs. uniprot
Match: A0A835ZB92_9STRA (Propionyl-CoA carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB92_9STRA)

HSP 1 Score: 108 bits (270), Expect = 4.480e-25
Identity = 53/101 (52.48%), Postives = 71/101 (70.30%), Query Frame = 0
Query:    5 IQPHVSYQGHAIEARVYAEDPFRKFLPSTGSLVTYREPETCHFPSLPTGDEAGGGGGGVRVDAGVVEGSAVSIYYDPMISKLIAHGETREVALKRLAMALD 105
            I PHV ++GHAIEARVYAEDPFR F+PSTG L+ Y+EP     P   + +E+      +R+D GV EGSA++++YDP+ISKLI +G  R  +L  + MALD
Sbjct:  364 IGPHVPFKGHAIEARVYAEDPFRNFMPSTGPLIRYQEPHAAFIPDGDSPEESYKRP--IRIDTGVDEGSAINMFYDPLISKLITYGADRRESLANMCMALD 462          
BLAST of mRNA_H-paniculata_contig43331.11050.1 vs. uniprot
Match: W7TIZ8_9STRA (Propionyl-CoA carboxylase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIZ8_9STRA)

HSP 1 Score: 106 bits (265), Expect = 2.140e-24
Identity = 61/118 (51.69%), Postives = 76/118 (64.41%), Query Frame = 0
Query:    1 PSPLIQPHVSYQGHAIEARVYAEDPFRKFLPSTGSLVTYREPETCHFPSLPTGDEAGGGGGGVRVDAGVVEGSAVSIYYDPMISKLIAHGETREVALKRLAMALD-----GELESLCF 113
            P  L    V ++G A+EARVYAEDP R FLPSTG L+TYREP   H   +    E  GG   VR+D GV EGS +S++YDPMI+KL+++G TR  AL+RL  ALD     G   +LCF
Sbjct:  392 PGRLTAQPVPFKGWAMEARVYAEDPLRGFLPSTGHLITYREPR--HLMEM----EVEGGVPAVRIDTGVYEGSEISMFYDPMIAKLVSYGSTRAEALERLNEALDAYVIQGLSHNLCF 503          
BLAST of mRNA_H-paniculata_contig43331.11050.1 vs. uniprot
Match: A0A2E4NDX0_9PROT (Propionyl-CoA carboxylase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4NDX0_9PROT)

HSP 1 Score: 105 bits (261), Expect = 7.150e-24
Identity = 57/101 (56.44%), Postives = 72/101 (71.29%), Query Frame = 0
Query:    6 QPHVSYQGHAIEARVYAEDPFRKFLPSTGSLVTYREPETCHFPSLPTGDEAGGGGGGVRVDAGVVEGSAVSIYYDPMISKLIAHGETREVALKRLAMALDG 106
            Q  ++++G AIEAR+YAEDP R FLPSTG LV YREP+          D+ G     VR+D+GVVEGS +S++YDPMI+KLIA G TRE A++RLA AL G
Sbjct:  325 QSEIAFRGWAIEARLYAEDPARGFLPSTGRLVRYREPQ----------DKTG-----VRIDSGVVEGSEISVFYDPMIAKLIASGTTRERAVERLASALGG 410          
BLAST of mRNA_H-paniculata_contig43331.11050.1 vs. uniprot
Match: A0A1Q7TW49_9PROT (Propionyl-CoA carboxylase alpha chain, mitochondrial (Fragment) n=3 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A1Q7TW49_9PROT)

HSP 1 Score: 104 bits (260), Expect = 7.930e-24
Identity = 56/104 (53.85%), Postives = 67/104 (64.42%), Query Frame = 0
Query:    3 PLIQPHVSYQGHAIEARVYAEDPFRKFLPSTGSLVTYREPETCHFPSLPTGDEAGGGGGGVRVDAGVVEGSAVSIYYDPMISKLIAHGETREVALKRLAMALDG 106
            P  QP V   G AIEAR+YAEDP R FLPS G LV Y  PE                G G+RVDAGV EG+ +S+YYDPMI+KLIA+G+ R+ A++RL  ALDG
Sbjct:  198 PFAQPDVRQNGWAIEARIYAEDPTRNFLPSIGRLVRYCPPE----------------GEGIRVDAGVFEGAEISLYYDPMIAKLIAYGKDRDAAIERLGDALDG 285          
BLAST of mRNA_H-paniculata_contig43331.11050.1 vs. uniprot
Match: A0A6N7A2Y8_9PROT (Propionyl-CoA carboxylase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A6N7A2Y8_9PROT)

HSP 1 Score: 103 bits (257), Expect = 2.520e-23
Identity = 55/103 (53.40%), Postives = 64/103 (62.14%), Query Frame = 0
Query:    3 PLIQPHVSYQGHAIEARVYAEDPFRKFLPSTGSLVTYREPETCHFPSLPTGDEAGGGGGGVRVDAGVVEGSAVSIYYDPMISKLIAHGETREVALKRLAMALD 105
            P  Q  V  QG A+EAR+YAEDPFR FLPSTG LV YREPE                G  VRVD GV EG  +S++YDPMI+KL  HG TR+ A+ R+  ALD
Sbjct:  358 PFQQKDVKLQGWAVEARLYAEDPFRNFLPSTGRLVKYREPEA---------------GPDVRVDTGVFEGGEISMFYDPMIAKLCTHGHTRDEAIDRMRRALD 445          
BLAST of mRNA_H-paniculata_contig43331.11050.1 vs. uniprot
Match: A0A1E4JBJ7_9SPHN (Propionyl-CoA carboxylase n=1 Tax=Sphingomonas sp. SCN 67-18 TaxID=1660141 RepID=A0A1E4JBJ7_9SPHN)

HSP 1 Score: 103 bits (256), Expect = 3.410e-23
Identity = 63/109 (57.80%), Postives = 69/109 (63.30%), Query Frame = 0
Query:    4 LIQPHVSYQGHAIEARVYAEDPFRKFLPSTGSLVTYREPETCHFPSLPTGDEAGGGGGGVRVDAGVVEGSAVSIYYDPMISKLIAHGETREVALKRLAMALDG-ELESL 111
            + Q  V   G AIE RVYAEDP+R FLPSTG LV YR P          GDE G GG  VRVDAGV EG  VSI+YDPMI+KL+  GETR+ A  R   ALD  ELE L
Sbjct:  327 MRQDDVKIDGWAIENRVYAEDPYRGFLPSTGRLVRYRTPAPAW-----AGDERGEGG--VRVDAGVAEGGEVSIFYDPMIAKLVTWGETRDEAADRQIAALDRFELEGL 428          
BLAST of mRNA_H-paniculata_contig43331.11050.1 vs. uniprot
Match: A0A4R3J810_9PROT (Biotin carboxylase n=1 Tax=Varunaivibrio sulfuroxidans TaxID=1773489 RepID=A0A4R3J810_9PROT)

HSP 1 Score: 103 bits (256), Expect = 3.450e-23
Identity = 55/105 (52.38%), Postives = 71/105 (67.62%), Query Frame = 0
Query:    1 PSPLIQPHVSYQGHAIEARVYAEDPFRKFLPSTGSLVTYREPETCHFPSLPTGDEAGGGGGGVRVDAGVVEGSAVSIYYDPMISKLIAHGETREVALKRLAMALD 105
            P  ++Q ++  +G AIE R+YAEDPFR FLPS G LV YR P          G+E     GGVRVD+GV EG  +SI+YDPMI+KLI +GETR +A+ R+ +ALD
Sbjct:  356 PLGIVQKNIRPKGWAIETRIYAEDPFRGFLPSVGRLVRYRAP----------GEE-----GGVRVDSGVYEGGEISIHYDPMIAKLITYGETRALAIARMRLALD 445          
BLAST of mRNA_H-paniculata_contig43331.11050.1 vs. uniprot
Match: A0A7S2G2Z4_9STRA (Propionyl-CoA carboxylase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G2Z4_9STRA)

HSP 1 Score: 102 bits (255), Expect = 3.900e-23
Identity = 53/94 (56.38%), Postives = 67/94 (71.28%), Query Frame = 0
Query:   12 QGHAIEARVYAEDPFRKFLPSTGSLVTYREPETCHFPSLPTGDEAGGGGGGVRVDAGVVEGSAVSIYYDPMISKLIAHGETREVALKRLAMALD 105
            +G A+EARVYAEDPFR FLPSTGSL+ YREPE C   +L +          VRVD+GV EG+ +S YYDPMISKL+ HG TR+  + R++ AL+
Sbjct:  146 KGWALEARVYAEDPFRGFLPSTGSLLDYREPEGCTAFNLESN---------VRVDSGVREGTEISTYYDPMISKLVTHGATRDECIDRMSDALN 230          
BLAST of mRNA_H-paniculata_contig43331.11050.1 vs. uniprot
Match: UPI001657981E (acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha n=1 Tax=Sphingomonas sp. JC676 TaxID=2768065 RepID=UPI001657981E)

HSP 1 Score: 102 bits (254), Expect = 6.340e-23
Identity = 57/103 (55.34%), Postives = 64/103 (62.14%), Query Frame = 0
Query:    3 PLIQPHVSYQGHAIEARVYAEDPFRKFLPSTGSLVTYREPETCHFPSLPTGDEAGGGGGGVRVDAGVVEGSAVSIYYDPMISKLIAHGETREVALKRLAMALD 105
            PL Q  V   G AIE RVYAEDP+R FLPSTG LV YR P                   GVRVD GVVEGS +S++YDPMI+KLI HG TRE A+ R  +ALD
Sbjct:  326 PLTQDEVKINGWAIENRVYAEDPYRGFLPSTGRLVRYRPPSAED---------------GVRVDDGVVEGSEISMFYDPMIAKLITHGATREEAIDRQIVALD 413          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig43331.11050.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G756_ECTSI1.080e-3370.19Propionyl-CoA carboxylase, alpha subunit n=2 Tax=E... [more]
A0A835ZB92_9STRA4.480e-2552.48Propionyl-CoA carboxylase n=1 Tax=Tribonema minus ... [more]
W7TIZ8_9STRA2.140e-2451.69Propionyl-CoA carboxylase n=2 Tax=Monodopsidaceae ... [more]
A0A2E4NDX0_9PROT7.150e-2456.44Propionyl-CoA carboxylase n=1 Tax=Rhodospirillacea... [more]
A0A1Q7TW49_9PROT7.930e-2453.85Propionyl-CoA carboxylase alpha chain, mitochondri... [more]
A0A6N7A2Y8_9PROT2.520e-2353.40Propionyl-CoA carboxylase n=3 Tax=Alphaproteobacte... [more]
A0A1E4JBJ7_9SPHN3.410e-2357.80Propionyl-CoA carboxylase n=1 Tax=Sphingomonas sp.... [more]
A0A4R3J810_9PROT3.450e-2352.38Biotin carboxylase n=1 Tax=Varunaivibrio sulfuroxi... [more]
A0A7S2G2Z4_9STRA3.900e-2356.38Propionyl-CoA carboxylase n=1 Tax=Florenciella par... [more]
UPI001657981E6.340e-2355.34acetyl/propionyl/methylcrotonyl-CoA carboxylase su... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005482Biotin carboxylase, C-terminalSMARTSM00878Biotin_carb_C_2coord: 17..119
e-value: 2.8E-20
score: 83.4
IPR005482Biotin carboxylase, C-terminalPFAMPF02785Biotin_carb_Ccoord: 17..105
e-value: 1.0E-23
score: 83.5
NoneNo IPR availableGENE3D3.30.470.130coord: 1..109
e-value: 3.7E-27
score: 97.0
NoneNo IPR availablePANTHERPTHR18866:SF104PROPIONYL-COA CARBOXYLASE ALPHA CHAIN, MITOCHONDRIALcoord: 6..105
NoneNo IPR availablePANTHERPTHR18866CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASEcoord: 6..105
IPR011764Biotin carboxylation domainPROSITEPS50979BCcoord: 1..119
score: 20.57
IPR011054Rudiment single hybrid motifSUPERFAMILY51246Rudiment single hybrid motifcoord: 12..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig43331contigH-paniculata_contig43331:1280..1639 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig43331.11050.1mRNA_H-paniculata_contig43331.11050.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig43331 1280..1639 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig43331.11050.1 ID=prot_H-paniculata_contig43331.11050.1|Name=mRNA_H-paniculata_contig43331.11050.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=120bp
PSPLIQPHVSYQGHAIEARVYAEDPFRKFLPSTGSLVTYREPETCHFPSL
PTGDEAGGGGGGVRVDAGVVEGSAVSIYYDPMISKLIAHGETREVALKRL
AMALDGELESLCFFLVCGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005482Biotin_COase_C
IPR011764Biotin_carboxylation_dom
IPR011054Rudment_hybrid_motif