prot_H-paniculata_contig43321.11049.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig43321.11049.1
Unique Nameprot_H-paniculata_contig43321.11049.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length170
Homology
BLAST of mRNA_H-paniculata_contig43321.11049.1 vs. uniprot
Match: A0A061F8M9_THECC (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061F8M9_THECC)

HSP 1 Score: 105 bits (261), Expect = 4.030e-23
Identity = 56/148 (37.84%), Postives = 85/148 (57.43%), Query Frame = 0
Query:   27 HWKRAKEVEIEGLIDNRVWTQMERPKNKLIVSTMMIYKRKICEDGKVERYKCRLVAHGNRQIKGIHFQEASSPAPAAASTKIRLSHAAIQDWELRHVEFEQAYLQAPIDQEICVEIPVKY---RKF---SGAVGRLDEAIYGLVQAGR 168
            HWK A ++E++ L DN  W+ ++ P N   V    +YK K+  DGKVERYK RLVA G  QI+G  +QE  SP       ++  + AA Q+W L  ++   A+L   + +E+ +E+P  Y   R++   S  V +L +++YGL QA R
Sbjct:  171 HWKEAMDIELKALEDNGTWSIVQLPSNYHAVGCKWVYKVKLNADGKVERYKARLVAKGYNQIEGFDYQETFSPVARQTIVRMFFALAAAQNWRLSQLDINNAFLNGELTEEVYMELPQGYTFKREYPTSSRLVCKLHKSLYGLKQASR 318          
BLAST of mRNA_H-paniculata_contig43321.11049.1 vs. uniprot
Match: A0A0J7K690_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 (Fragment) n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K690_LASNI)

HSP 1 Score: 103 bits (256), Expect = 2.120e-22
Identity = 57/157 (36.31%), Postives = 89/157 (56.69%), Query Frame = 0
Query:   12 EPKNHREAQVSLEWEHWKRAKEVEIEGLIDNRVWTQMERPKNKLIVSTMMIYKRKICEDGKVERYKCRLVAHGNRQIKGIHFQEASSPAPAAASTKIRLSHAAIQDWELRHVEFEQAYLQAPIDQEICVEIPVKYRKFSGAVGRLDEAIYGLVQAGR 168
            EP+ + EA  S E E W+RA E E   LI N  WT+ + P  +  ++  +I+K+K   DGKV RYK RLV  G  Q  GI + E  +P     S +   S AA +D+E+   + + A+L   +D+EI +++P +    +G V +L +++YGL Q+ R
Sbjct:  564 EPQTYEEAMASNEVEQWRRAIEEEESALIKNNTWTKTKLPTGRKAITAKIIFKKKRDADGKVHRYKARLVVRGFSQRPGIDYNETYAPVIRYESIRFLFSLAAKEDFEIAQFDIKTAFLNGELDEEIFMQLPTRVTD-AGNVVKLQKSLYGLKQSPR 719          
BLAST of mRNA_H-paniculata_contig43321.11049.1 vs. uniprot
Match: A0A151R0M8_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151R0M8_CAJCA)

HSP 1 Score: 102 bits (254), Expect = 2.520e-22
Identity = 58/159 (36.48%), Postives = 86/159 (54.09%), Query Frame = 0
Query:   11 VEPKNHREAQVSLEWEHWKRAKEVEIEGLIDNRVWTQMERPKNKLIVSTMMIYKRKICEDGKVERYKCRLVAHGNRQIKGIHFQEASSPAPAAASTKIRLSHAAIQDWELRHVEFEQAYLQAPIDQEICVEIPV-KYRKFSGAVGRLDEAIYGLVQAGR 168
             EPK++ EA   LEW    +A   EI+ L  N  W  +E P NK  +    +YK K   DG +ERYK RLVA G  QI+G  + +  SP     + ++ L+ AA Q W LR ++   A+L   + +EI + +P   Y+   G + +L +++YGL QA R
Sbjct:  334 TEPKSYHEASKHLEW---IQAMNAEIQALESNHTWVLIELPPNKNAIGCRWVYKIKHRADGSIERYKARLVAKGYTQIEGQDYLDTFSPVAKLTTIRLLLAFAATQQWNLRQLDVNNAFLHGDLHEEIYMILPPGMYQDKQGMLCKLQKSLYGLKQASR 489          
BLAST of mRNA_H-paniculata_contig43321.11049.1 vs. uniprot
Match: A0A060SSE0_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SSE0_PYCCI)

HSP 1 Score: 99.8 bits (247), Expect = 3.550e-21
Identity = 51/162 (31.48%), Postives = 93/162 (57.41%), Query Frame = 0
Query:    7 SDLPVEPKNHREAQVSLEWEHWKRAKEVEIEGLIDNRVWTQMERPKNKLIVSTMMIYKRKICEDGKVERYKCRLVAHGNRQIKGIHFQEASSPAPAAASTKIRLSHAAIQDWELRHVEFEQAYLQAPIDQEICVEIPVKYRKFSGAVGRLDEAIYGLVQAGR 168
            S    EP+ ++EA    + E WK A   E+       ++ ++ERP+N+ +V    +++ K   DGK+++YK RLVA G  Q++G+ + +  +P    AS ++ L+ AA  D E+  ++ + A+L   +++EI +E P  +++    V RL +++YGL QA R
Sbjct:  958 STFSDEPRTYQEAMSRPDAEQWKAACAEELLSFAKAELYDEVERPRNRKVVDCKWVFRIKHGPDGKIQKYKARLVAKGFTQVEGVDYTDTFAPVTKFASIRMLLAFAAKHDLEVHQMDVKSAFLNGDLEEEIFMEAPPGFQQDKAHVWRLQKSLYGLKQASR 1119          
BLAST of mRNA_H-paniculata_contig43321.11049.1 vs. uniprot
Match: A0A085LPI1_9BILA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichuris suis TaxID=68888 RepID=A0A085LPI1_9BILA)

HSP 1 Score: 94.7 bits (234), Expect = 6.820e-21
Identity = 51/166 (30.72%), Postives = 91/166 (54.82%), Query Frame = 0
Query:    3 EELRSDLPVEPKNHREAQVSLEWEHWKRAKEVEIEGLIDNRVWTQMERPKNKLIVSTMMIYKRKICEDGKVERYKCRLVAHGNRQIKGIHFQEASSPAPAAASTKIRLSHAAIQDWELRHVEFEQAYLQAPIDQEICVEIPVKYRKFSGAVGRLDEAIYGLVQAGR 168
            +E+   + V+ ++  EA  S E + W++A + E + L+  + WT+++ PK   ++ +          +GKV+RYK RLVA G  Q  G+ + E  +P  +    ++ ++ A   +W +RHV+ + AYL   + +EI +++   Y    GAV +L   IYGL Q+GR
Sbjct:   67 DEVNFAMFVDARSVNEALSSNEAKEWRKAMDEEYKSLLARQTWTEVQMPKQATLIGS---------NEGKVQRYKARLVAQGFAQKSGVDYHETYAPVVSLTVIRLLMALAVCFNWHIRHVDVKCAYLYGKLTEEIFMKLSEGYEHPPGAVAKLLRPIYGLKQSGR 223          
BLAST of mRNA_H-paniculata_contig43321.11049.1 vs. uniprot
Match: A0A151T1T1_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T1T1_CAJCA)

HSP 1 Score: 98.2 bits (243), Expect = 1.210e-20
Identity = 56/159 (35.22%), Postives = 84/159 (52.83%), Query Frame = 0
Query:   11 VEPKNHREAQVSLEWEHWKRAKEVEIEGLIDNRVWTQMERPKNKLIVSTMMIYKRKICEDGKVERYKCRLVAHGNRQIKGIHFQEASSPAPAAASTKIRLSHAAIQDWELRHVEFEQAYLQAPIDQEICVEIPVKYR-KFSGAVGRLDEAIYGLVQAGR 168
             EPKN  EA  S   + W +A   EI  L  N  W     P +K  +    +YK K   DG ++RYK RLVA G  Q++G+ F +  SP     + ++ LS AAI +W L+ ++   A+L   +++E+ +++P      F G V RL  ++YGL QA R
Sbjct:  801 TEPKNFAEASKS---DSWLKAMHEEIFALEANNTWVLTTLPPHKTAIGCRWVYKVKHKADGSIDRYKARLVAKGYTQMEGLDFFDTFSPVAKLTTVRLLLSLAAINNWHLKQLDVNNAFLHGDLNEEVYMQLPPGLTPSFPGQVCRLQRSLYGLKQASR 956          
BLAST of mRNA_H-paniculata_contig43321.11049.1 vs. uniprot
Match: A0A8J6DDM6_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6DDM6_9ROSI)

HSP 1 Score: 96.7 bits (239), Expect = 3.940e-20
Identity = 53/156 (33.97%), Postives = 85/156 (54.49%), Query Frame = 0
Query:   13 PKNHREAQVSLEWEHWKRAKEVEIEGLIDNRVWTQMERPKNKLIVSTMMIYKRKICEDGKVERYKCRLVAHGNRQIKGIHFQEASSPAPAAASTKIRLSHAAIQDWELRHVEFEQAYLQAPIDQEICVEIPVKYRKFSGAVGRLDEAIYGLVQAGR 168
            PKN  EA   LE   W++A   EI+ L +N  W   + PK K  V    I+  K   DG+++RYK RLVA G  Q  G+ + E  +P     + ++ LS AA  DW L  ++ + A+L   +++E+ ++ P  + +  G V +L +++YGL Q+ R
Sbjct:  346 PKNIEEA---LESAEWRQAVMEEIKALKNNETWKVSDLPKGKKTVVCKWIFTTKFKPDGRIDRYKARLVAKGFTQTYGLDYDETFAPVAKLNTIRVLLSLAANLDWHLTQLDVKNAFLNGELNEEVYIDFPPGFEESKGQVCKLKKSLYGLKQSPR 498          
BLAST of mRNA_H-paniculata_contig43321.11049.1 vs. uniprot
Match: A0A438CYZ7_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CYZ7_VITVI)

HSP 1 Score: 95.5 bits (236), Expect = 9.380e-20
Identity = 52/151 (34.44%), Postives = 85/151 (56.29%), Query Frame = 0
Query:   20 QVSLEWEHWKRAKEVEIEGLIDNRVWTQMERPKNKLIVSTMMIYKRKICEDGKVERYKCRLVAHGNRQIKGIHFQEASSPAPAAASTKIRLSHAAIQDWELRHVEFEQAYLQAPIDQEICVEIP--VKYRKFSGAVGRLDEAIYGLVQAGR 168
            Q +L+   W++A   EI+ L  N  W  M+ P+ K  V    ++  K   DG+++RYK RLVA G  Q  GI FQE  +P     + ++ LS AA  DW L  ++ + A+L   +++E+ +EIP  +K+   +  V +L +++YGL Q+ R
Sbjct:  114 QEALQHPEWRKAVNEEIQALQKNDTWKIMKLPQGKRPVGCKWVFNVKYKADGRIDRYKARLVAKGFTQTYGIDFQETFAPVAKLNTIRVLLSLAANLDWNLHQLDVKNAFLNGDLEEEVYMEIPPGLKHSSSNDLVCKLQKSLYGLKQSPR 264          
BLAST of mRNA_H-paniculata_contig43321.11049.1 vs. uniprot
Match: A0A182HAC3_AEDAL (Integrase catalytic domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182HAC3_AEDAL)

HSP 1 Score: 95.5 bits (236), Expect = 1.000e-19
Identity = 53/159 (33.33%), Postives = 91/159 (57.23%), Query Frame = 0
Query:   12 EPKNHREAQVSLEWEHWKRAKEVEIEGLIDNRVWTQMERPKNKLIVSTMMIYKRKICEDGKVERYKCRLVAHGNRQIKGIHFQEASSPAPAAASTKIRLSHAAIQDWELRHVEFEQAYLQAPIDQEICVEIPVKYR--KFSGAVGRLDEAIYGLVQAGR 168
            EP  + EA  S E E W +A   E + LIDN  W  ++ P ++ I+ +  ++KRK+  DGKV+R+K RLVA G  Q  G+ F ++ +P    ++ ++ L+ A  +  +++H++ + AYL   +++E+ +  P  +        V RL ++IYGL QA R
Sbjct:  349 EPTTYEEAVGSEEKEKWIKAMSEEYQSLIDNDTWELVDPPTDRNIIGSRWVFKRKLNADGKVDRFKARLVAQGFAQRVGVDFDDSFAPVAMHSTFRLLLTVAGYRKMQVKHLDVKSAYLYGTLEEEVFMRQPPGFAVPHKEQQVCRLRKSIYGLKQAAR 507          
BLAST of mRNA_H-paniculata_contig43321.11049.1 vs. uniprot
Match: A0A151T5R4_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T5R4_CAJCA)

HSP 1 Score: 95.5 bits (236), Expect = 1.050e-19
Identity = 50/148 (33.78%), Postives = 88/148 (59.46%), Query Frame = 0
Query:   22 SLEWEHWKRAKEVEIEGLIDNRVWTQMERPKNKLIVSTMMIYKRKICEDGKVERYKCRLVAHGNRQIKGIHFQEASSPAPAAASTKIRLSHAAIQDWELRHVEFEQAYLQAPIDQEICVEIPVKYR-KFSGAVGRLDEAIYGLVQAGR 168
            +L+ E W+ A   E+  L +N+ W  ++ PK K +V    I+  K+  DGK++RYK RLVA G  Q  GI ++E  +P     S +I +S AA  DW+L  ++ + A+L   +++E+ +++P  +  + +  V RL++++YGL Q+ R
Sbjct:  858 ALKDEKWRAAVLEEMAALEENKTWDIVKLPKEKKVVGCRWIFTTKMGADGKIDRYKARLVAQGYTQTHGIDYEETFAPVAKLNSIRILISLAANLDWKLHQLDVKNAFLNGKLEEEVYMKLPPGFEGENNDVVCRLNKSLYGLKQSPR 1005          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig43321.11049.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A061F8M9_THECC4.030e-2337.84Cysteine-rich RLK (RECEPTOR-like protein kinase) 8... [more]
A0A0J7K690_LASNI2.120e-2236.31Retrovirus-related pol polyprotein from transposon... [more]
A0A151R0M8_CAJCA2.520e-2236.48Retrovirus-related Pol polyprotein from transposon... [more]
A0A060SSE0_PYCCI3.550e-2131.48Integrase catalytic domain-containing protein n=1 ... [more]
A0A085LPI1_9BILA6.820e-2130.72Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A151T1T1_CAJCA1.210e-2035.22Retrovirus-related Pol polyprotein from transposon... [more]
A0A8J6DDM6_9ROSI3.940e-2033.97Integrase catalytic domain-containing protein n=1 ... [more]
A0A438CYZ7_VITVI9.380e-2034.44Retrovirus-related Pol polyprotein from transposon... [more]
A0A182HAC3_AEDAL1.000e-1933.33Integrase catalytic domain-containing protein n=1 ... [more]
A0A151T5R4_CAJCA1.050e-1933.78Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 44..169
e-value: 4.5E-22
score: 78.9
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 9..168
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 9..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig43321contigH-paniculata_contig43321:76..585 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig43321.11049.1mRNA_H-paniculata_contig43321.11049.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig43321 76..597 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig43321.11049.1 ID=prot_H-paniculata_contig43321.11049.1|Name=mRNA_H-paniculata_contig43321.11049.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=170bp
MPEELRSDLPVEPKNHREAQVSLEWEHWKRAKEVEIEGLIDNRVWTQMER
PKNKLIVSTMMIYKRKICEDGKVERYKCRLVAHGNRQIKGIHFQEASSPA
PAAASTKIRLSHAAIQDWELRHVEFEQAYLQAPIDQEICVEIPVKYRKFS
GAVGRLDEAIYGLVQAGRC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like