mRNA_H-paniculata_contig11724.1104.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig11724.1104.1
Unique NamemRNA_H-paniculata_contig11724.1104.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig11724.1104.1 vs. uniprot
Match: D7G3E1_ECTSI (Similar to camp and camp-inhibited cgmp 3,5-cyclic phosphodiesterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E1_ECTSI)

HSP 1 Score: 237 bits (605), Expect = 1.410e-71
Identity = 149/253 (58.89%), Postives = 174/253 (68.77%), Query Frame = 1 
Query:    1 VLADFMDTIGCERATLMFMNTPAQEMFFFDGEQRIVFPINKGIAGHCATTGIAVVANDPYSHPHFNPQVDKDTGFVTRNILCEPIRSRQGGNVVAVLQMVNKKNRKDFTEQDSTVMEMCVVKVAHALDTCFAALIAAEAKWAKSVGRTYSQSGXXXXXXXXXXXXXXAMDMVGIIGDVDSWSESWDEG------------RYGSFGGGGGGETVHG---------PQISNRRGSGSSHEDHEKLRRRTEYGNE 696
            +LADF+ TIGC+RATLMF++TPAQE+FFFDG  RI FP+ KGIAGH A TG+ +V NDPY++  FN QVDKD+GFVTRNILCEPI+SR+GGNVVAVLQMVNKK+ +DF+E D+ VMEMC VKVA ALDT FAAL++AE +WAK+ GR      XXXXXXXXXXXXXX                                 R GS GG  G  T+ G         PQISNRRGSG+S  D EKL+RRTEYG E
Sbjct:  297 ILADFVSTIGCDRATLMFVDTPAQELFFFDGNMRIAFPLRKGIAGHVAATGMGLVVNDPYNNERFNRQVDKDSGFVTRNILCEPIKSRKGGNVVAVLQMVNKKDGEDFSEHDAGVMEMCAVKVALALDTSFAALVSAENEWAKAAGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGSLGGRRGSATLSGLGDDGLQEVPQISNRRGSGTSKADVEKLKRRTEYGKE 549
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BLAST of mRNA_H-paniculata_contig11724.1104.1 vs. uniprot
Match: A0A835ZCA7_9STRA (SAM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCA7_9STRA)

HSP 1 Score: 174 bits (440), Expect = 9.440e-48
Identity = 82/150 (54.67%), Postives = 112/150 (74.67%), Query Frame = 1 
Query:    1 VLADFMDTIGCERATLMFMNTPAQEMFFFDGEQRIVFPINKGIAGHCATTGIAVVANDPYSHPHFNPQVDKDTGFVTRNILCEPIRSRQGGNVVAVLQMVNKKNRKDFTEQDSTVMEMCVVKVAHALDTCFAALIAAEAKWAKSVGRTYS 450
            +L    DT+ CE+AT+MF++   + +FF+DG+  I FP++KG+AG+CATTG  ++ NDPYS P FN  +DK TGFVTRNILCEPIRSR GG ++AVLQM+NK+  + FTEQDS VMEM V+ V+ AL+  F ALI+ +++WA +  R  S
Sbjct:  276 LLQQLCDTMSCEKATIMFLDQHNEVLFFYDGDTCIRFPMSKGVAGYCATTGERLLVNDPYSDPRFNQAIDKQTGFVTRNILCEPIRSRMGGALLAVLQMINKRGGEGFTEQDSEVMEMAVLNVSEALENRFRALISHQSEWAGTKARRNS 425
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BLAST of mRNA_H-paniculata_contig11724.1104.1 vs. uniprot
Match: A0A7S4D805_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D805_HETAK)

HSP 1 Score: 113 bits (283), Expect = 3.340e-27
Identity = 60/128 (46.88%), Postives = 81/128 (63.28%), Query Frame = 1 
Query:    1 VLADFMDTIGCERATLMFMNTPAQEMFFFD-GEQRIVFPINKGIAGHCATTGIAVVANDPYSHPHFNPQVDKDTGFVTRNILCEPIRSRQGGNVVAVLQMVNKKNRKDFTEQDSTVMEMCVVKVAHAL 381
            VL  F   I CERA+LMF++   +E+FFFD  + +  FP + GIAGH  +TG  +   D YS P FN ++DK TGF TRNILC PIR+  G  +VAV+QM+NK++   F+  D  ++E C   VA  L
Sbjct:   61 VLGRFQQIINCERASLMFVDDRRKEIFFFDESDHQRRFPSSAGIAGHVVSTGERLNIPDAYSDPRFNREMDKLTGFHTRNILCAPIRTYTG-QIVAVVQMLNKRDEDHFSHNDEGIIEACGTDVAEVL 187
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BLAST of mRNA_H-paniculata_contig11724.1104.1 vs. uniprot
Match: A0A6H5JRH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH4_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 2.850e-26
Identity = 47/69 (68.12%), Postives = 58/69 (84.06%), Query Frame = 1 
Query:    1 VLADFMDTIGCERATLMFMNTPAQEMFFFDGEQRIVFPINKGIAGHCATTGIAVVANDPYSHPHFNPQV 207
            +LADF+ TIGC+RATLMF++TPAQE+FFFDG  RI FP+ KGIAGH A TG+ +V NDPY++ HFN QV
Sbjct:   85 ILADFVSTIGCDRATLMFVDTPAQELFFFDGNMRIAFPLRKGIAGHVAATGMGLVVNDPYNNEHFNRQV 153
[Close]
BLAST of mRNA_H-paniculata_contig11724.1104.1 vs. uniprot
Match: A0A7S2LDR6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LDR6_9STRA)

HSP 1 Score: 104 bits (260), Expect = 7.940e-24
Identity = 51/125 (40.80%), Postives = 75/125 (60.00%), Query Frame = 1 
Query:   13 FMDTIGCERATLMFMNTPAQEMFFFDGEQ-RIVFPINKGIAGHCATTGIAVVANDPYSHPHFNPQVDKDTGFVTRNILCEPIRSRQGGNVVAVLQMVNKKNRKDFTEQDSTVMEMCVVKVAHALD 384
            F  TI CER +++F +    E+FFFD +  R    +  GIAG+ A  G     +D Y    FN  +D+ TGF T+++LC PI++R G  ++AV+QM+NKK  + FT+ D  +M  C  KVA AL+
Sbjct:   72 FKKTIACERCSILFCDRDKNELFFFDDKLVRFSLSLELGIAGYVAKHGEIANVSDVYVDSRFNKNLDEQTGFRTKSLLCAPIKNRSGDCIIAVIQMLNKKGGESFTDHDEDLMRNCSFKVAEALE 196
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BLAST of mRNA_H-paniculata_contig11724.1104.1 vs. uniprot
Match: A0A0S7WFB4_9BACT (GAF domain-containing protein (Fragment) n=1 Tax=candidate division Zixibacteria bacterium DG_27 TaxID=1703423 RepID=A0A0S7WFB4_9BACT)

HSP 1 Score: 93.2 bits (230), Expect = 7.100e-20
Identity = 48/122 (39.34%), Postives = 77/122 (63.11%), Query Frame = 1 
Query:   25 IGCERATLMFMNTPAQEMF--FFDGEQRIVFPINKGIAGHCATTGIAVVANDPYSHPHFNPQVDKDTGFVTRNILCEPIRSRQGGNVVAVLQMVNKKNRKDFTEQDSTVMEMCVVKVAHALD 384
            +  +R TL  ++   +E++     GE+RI  P +KGIAG   TTG  ++ +D YS+PHFNP++DK TG+ TR++LC P+R  +G  V+ V Q++NK+   DF E+D  ++E      A A++
Sbjct:   47 LKADRCTLFLLDKKREELWSKVAMGEERIRLPKDKGIAGLVVTTGETLIIDDAYSNPHFNPEIDKKTGYCTRSLLCGPMRDSRG-EVLGVFQVLNKREG-DFREEDKELLEAVAAFSAIAIE 166
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BLAST of mRNA_H-paniculata_contig11724.1104.1 vs. uniprot
Match: A0A1G1BSG9_9BACT (Guanylate cyclase n=1 Tax=Lentisphaerae bacterium RIFOXYB12_FULL_65_16 TaxID=1798581 RepID=A0A1G1BSG9_9BACT)

HSP 1 Score: 94.4 bits (233), Expect = 1.630e-18
Identity = 47/126 (37.30%), Postives = 76/126 (60.32%), Query Frame = 1 
Query:   19 DTIGCERATLMFMNTPAQEMFFF----DGEQRIVFPINKGIAGHCATTGIAVVANDPYSHPHFNPQVDKDTGFVTRNILCEPIRSRQGGNVVAVLQMVNKKNRKDFTEQDSTVMEMCVVKVAHALD 384
            + +G +R+TL   +    E+F      D    I FP ++GIAG   T+G A+V  D Y+ P FNP+VD+ TG+ TRNIL  P+R+ +   ++ V Q++NK N  DF ++D T+++    + A+AL+
Sbjct:   41 EALGADRSTLFLYDAETHELFSRVAQGDAMGEIRFPCDRGIAGAAFTSGTAIVIPDAYADPRFNPEVDRRTGYRTRNILSSPLRNMRK-EIIGVTQVLNKNNGADFDDEDQTLLDALTSQAANALE 165
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BLAST of mRNA_H-paniculata_contig11724.1104.1 vs. uniprot
Match: G4ZPG0_PHYSP (Phosphodiesterase n=6 Tax=Phytophthora TaxID=4783 RepID=G4ZPG0_PHYSP)

HSP 1 Score: 92.8 bits (229), Expect = 6.030e-18
Identity = 53/131 (40.46%), Postives = 75/131 (57.25%), Query Frame = 1 
Query:    1 VLADFMDTIGCERATLMFMNTPAQEMFFFDGEQRIV----FPINKGIAGHCATTGIAVVANDPYSHPHFNPQVDKDTGFVTRNILCEPIRSRQGGNVVAVLQMVNKKNRKDFTEQDSTVMEMCVVKVAHAL 381
            VLA   + +G ER  L F+    ++  F      IV     PI KGIAG+ A TG  V+ ND YSHP F+P +D+ TGF+T+ ILC P++S +G  ++AVL  VNK +  DFT +D+  +      V  +L
Sbjct:  342 VLAVCHELVGTERIGL-FIKIEGEDELFIASAADIVRGEYVPITKGIAGYVARTGETVITNDAYSHPLFDPTLDQKTGFLTKRILCLPVKSPEG-TILAVLSAVNKVDGMDFTSEDAVFLNYAAEAVGTSL 470
[Close]
BLAST of mRNA_H-paniculata_contig11724.1104.1 vs. uniprot
Match: A0A2V9KGP5_9BACT (PPM-type phosphatase domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9KGP5_9BACT)

HSP 1 Score: 91.7 bits (226), Expect = 1.390e-17
Identity = 51/106 (48.11%), Postives = 67/106 (63.21%), Query Frame = 1 
Query:   34 ERATLMFMNTPAQEMFFFDG----EQRIVFPINKGIAGHCATTGIAVVANDPYSHPHFNPQVDKDTGFVTRNILCEPIRSRQGGNVVAVLQMVNKKNRKDFTEQDS 339
            ER TL  ++   QE++        +Q I  PI KGIAGH A TG  V  +D Y+ P FNP+VDK TGF TRNILC PI ++Q   ++A LQ++NK+    FTE+DS
Sbjct:  248 ERGTLFLVDERTQEIWSLIAHGLEKQEIRLPIGKGIAGHVAKTGEVVNISDAYADPRFNPEVDKRTGFRTRNILCLPIHNKQS-KIIATLQLLNKEGGA-FTEEDS 351
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BLAST of mRNA_H-paniculata_contig11724.1104.1 vs. uniprot
Match: A0A225X3X3_9STRA (Phosphodiesterase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X3X3_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.960e-17
Identity = 52/131 (39.69%), Postives = 75/131 (57.25%), Query Frame = 1 
Query:    1 VLADFMDTIGCERATLMFMNTPAQEMFFFDGEQRIV----FPINKGIAGHCATTGIAVVANDPYSHPHFNPQVDKDTGFVTRNILCEPIRSRQGGNVVAVLQMVNKKNRKDFTEQDSTVMEMCVVKVAHAL 381
            VLA   + +G ER  L F+    ++  +      IV     PI KGIAG+ A TG  V+ ND YSHP F+P +D+ TGF+T+ ILC P++S +G  ++AVL  VNK +  DFT +D+  +      V  +L
Sbjct:  225 VLAVCHELVGTERIGL-FIKIDGEDELYIASAADIVRGEYVPITKGIAGYVARTGETVITNDAYSHPLFDPTLDQKTGFLTKRILCLPVKSPEG-TILAVLSAVNKVDGMDFTNEDAIFLNYAAEAVGTSL 353
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11724.1104.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3E1_ECTSI1.410e-7158.89Similar to camp and camp-inhibited cgmp 3,5-cyclic... [more]
A0A835ZCA7_9STRA9.440e-4854.67SAM domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S4D805_HETAK3.340e-2746.88Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6H5JRH4_9PHAE2.850e-2668.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2LDR6_9STRA7.940e-2440.80Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A0S7WFB4_9BACT7.100e-2039.34GAF domain-containing protein (Fragment) n=1 Tax=c... [more]
A0A1G1BSG9_9BACT1.630e-1837.30Guanylate cyclase n=1 Tax=Lentisphaerae bacterium ... [more]
G4ZPG0_PHYSP6.030e-1840.46Phosphodiesterase n=6 Tax=Phytophthora TaxID=4783 ... [more]
A0A2V9KGP5_9BACT1.390e-1748.11PPM-type phosphatase domain-containing protein n=1... [more]
A0A225X3X3_9STRA1.960e-1739.69Phosphodiesterase n=1 Tax=Phytophthora megakarya T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11724contigH-paniculata_contig11724:210..4360 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score228.0
Seed ortholog evalue4.4e-57
Seed eggNOG ortholog2880.D7G3E1
KEGG rclassRC00296
KEGG koko:K13293
KEGG ReactionR00191
KEGG Pathwayko00230,ko04024,ko05032,map00230,map04024,map05032
Hectar predicted targeting categoryother localisation
EggNOG free text desc.3',5'-cyclic-nucleotide phosphodiesterase activity
EggNOG OGsKOG3689@1,KOG3689@2759
Ec32 ortholog descriptionGAF domain
Ec32 orthologEc-09_001160.1
EC3.1.4.53
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons6
Model size705
Cds size690
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928881.4710963-UTR-H-paniculata_contig11724:209..2241622928881.4710963-UTR-H-paniculata_contig11724:209..224Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11724 210..224 +
1691480655.2160158-UTR-H-paniculata_contig11724:209..2241691480655.2160158-UTR-H-paniculata_contig11724:209..224Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11724 210..224 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928881.4846756-CDS-H-paniculata_contig11724:224..2811622928881.4846756-CDS-H-paniculata_contig11724:224..281Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11724 225..281 +
1691480655.2270336-CDS-H-paniculata_contig11724:224..2811691480655.2270336-CDS-H-paniculata_contig11724:224..281Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11724 225..281 +
1622928881.4978065-CDS-H-paniculata_contig11724:1181..13131622928881.4978065-CDS-H-paniculata_contig11724:1181..1313Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11724 1182..1313 +
1691480655.2369912-CDS-H-paniculata_contig11724:1181..13131691480655.2369912-CDS-H-paniculata_contig11724:1181..1313Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11724 1182..1313 +
1622928881.513755-CDS-H-paniculata_contig11724:2369..24231622928881.513755-CDS-H-paniculata_contig11724:2369..2423Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11724 2370..2423 +
1691480655.2462797-CDS-H-paniculata_contig11724:2369..24231691480655.2462797-CDS-H-paniculata_contig11724:2369..2423Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11724 2370..2423 +
1622928881.856167-CDS-H-paniculata_contig11724:3006..30811622928881.856167-CDS-H-paniculata_contig11724:3006..3081Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11724 3007..3081 +
1691480655.254445-CDS-H-paniculata_contig11724:3006..30811691480655.254445-CDS-H-paniculata_contig11724:3006..3081Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11724 3007..3081 +
1622928881.8834257-CDS-H-paniculata_contig11724:3760..40271622928881.8834257-CDS-H-paniculata_contig11724:3760..4027Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11724 3761..4027 +
1691480655.2707405-CDS-H-paniculata_contig11724:3760..40271691480655.2707405-CDS-H-paniculata_contig11724:3760..4027Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11724 3761..4027 +
1622928881.9053657-CDS-H-paniculata_contig11724:4255..43601622928881.9053657-CDS-H-paniculata_contig11724:4255..4360Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11724 4256..4360 +
1691480655.2804785-CDS-H-paniculata_contig11724:4255..43601691480655.2804785-CDS-H-paniculata_contig11724:4255..4360Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11724 4256..4360 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11724.1104.1prot_H-paniculata_contig11724.1104.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig11724 225..4360 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig11724.1104.1

>prot_H-paniculata_contig11724.1104.1 ID=prot_H-paniculata_contig11724.1104.1|Name=mRNA_H-paniculata_contig11724.1104.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=230bp
MDTIGCERATLMFMNTPAQEMFFFDGEQRIVFPINKGIAGHCATTGIAVV
ANDPYSHPHFNPQVDKDTGFVTRNILCEPIRSRQGGNVVAVLQMVNKKNR
KDFTEQDSTVMEMCVVKVAHALDTCFAALIAAEAKWAKSVGRTYSQSGGG
DDDDAVAAAAAAAMDMVGIIGDVDSWSESWDEGRYGSFGGGGGGETVHGP
QISNRRGSGSSHEDHEKLRRRTEYGNEVRN
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mRNA from alignment at H-paniculata_contig11724:210..4360+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig11724.1104.1 ID=mRNA_H-paniculata_contig11724.1104.1|Name=mRNA_H-paniculata_contig11724.1104.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4151bp|location=Sequence derived from alignment at H-paniculata_contig11724:210..4360+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGTTGGCAGATTTCATGGATACCATAGGTTGCGAGCGCGCCACGCTCAT
GTTCATGAACACACCTGCTCAGGTGCGGAAACACCTGAAATGCACGAAAA
TAGACAGAGACAAAAACTACAAAGCACAAAAATGTACACAAAAATGTATC
CAGCACTAGTAGTACGTCTCCTGCTTTCATGACTGAAAGCGTAAGAGTAG
AGACGCAGTAGTGCAAAAACTGAACGCGAAGAAGCGTATCAGTTATTGTT
GTGTGAATACATTGTATCTGCTGAAAAGCTCTTATCATTATATTATATAT
ACACACTTGGTGGCGTTCGAGAGCAAGATCTTGGAATCAAACTAAGCGCG
CAAGCTAAAAACGACTGACTCTACGGCATGGATTTCGCTGATGTCTTATG
TACATGTTTAGTCCAACGTTCAAAACCCAAGGTCCCAAATCCCAAATCCA
AGGTTCCAAATGTCAAATCTAAGATACCAAGATCCAAGCCCCAAGATCTA
AATTCGGAAACGTTCACGTACCAACCCGACAACTCTCGTCGGCAAAAAAT
GGTTGGTTCCTTGGTTGATACTTTTTGCGTGAGAACAGCCGATCACGCGC
TCCCCGAGCTCCTTGGGCTCCTGGGCCTGGGCCCCCATGTAAAACTTTGG
TCTTTGTTGGCTAAATTGTTGCTTCCAATTCGTCGTCCGGCATTCGGAAT
ACTCCTGATTTAGAGCTAGTGCCCTTATCCTATACGTGGTTGGGTGGTTG
AGTGGTGGTCATGTGTATACCGACCATAATCGTGTGCGAATAGATCTGAA
ACTATTCGCCTACAGCTTAGCTCTAGTACTTGAAACGTTCTGATACTACT
AGTACCATTTGTACTTGTCTCTGCTTCAGCTTACGCCAAAGAGTTTCCCA
ATCAGCCCTACAGTTAATACAGATTCGATCTTCTTCCTTCATCTTGAATG
CCTTGCCATGAAACGTTTTCAGGAGATGTTCTTCTTCGACGGAGAGCAGC
GCATTGTTTTCCCTATTAATAAGGGCATCGCGGGGCACTGTGCGACGACG
GGCATCGCGGTAGTCGCTAACGACCCCTACTCGCACCCCCATTTCAATCC
TCAGGTGGGTGACAGTCAGCCGAGCACCAAAAAATAGTAGGAAAAGCAAA
TACAATAGGCTCGCTTCTAGAGACACCTAAGACCACATCAGGTCCATACC
AAAAAAATGCAGAACAGTTCATTGTTATTGCGCTCTGGGTCCCCTAAGTG
GTATTTCGCAACCATTTAATGAAATCGTATATAGCCCCTCGAATGTCCGC
GGCAAACTACCGCAGCATCTCGAACCCATGGCGAACCTGGGTGGAGAATC
TGTGCTTGGTCCAGTTCGGTCACGATTCCGATCAGATTCTATCAGATCCT
ATCAGGTCCGTTCCTTTCCGATCCAATTCAATCCGGTCCGGTCCATTTCG
ATGACGTAATAATTCACACGAATCAAGCTGAACCTGATGCAGTCTAGTTG
TAGGATTGTATTATTTACTATCGAACAACAACAGCCCTTGTCCGTTACCT
GTAAACAGAAGAAAACAGCGTGTTGCAAAGGCAGGTGGGAAAATAGACTC
GCGGCACTTCTTGCAACTTGTTCCATAGTCTTACTTGGGTGTTGGTACCA
TTCCTACCGTATTAACGTGCTAACTACCGCTCTAGCCGTTTCAACAATGA
AGCAATCAATTCAAGGTCCGAATGGGCGGGGGGAAGAGTTTAAATAGATA
TTGCTAAAGATCTTAAACGGCCACGATCGCGATCTATTGACACAAAGACT
CACTTCATGTGCGGCGGTATTGCACGACAGGGTGACACGAGAAAATACCG
TCTCCCTTGGACCCCCTCTTTCACGCGTTGATATTTGCTGATTGGCTTCA
ACGCTTCCATTTCTTTCTTGCAAATAGCCTTGAATAGTTCACACGGGCTG
TTATGTGACGACTACTGTGAATCAGGGCTTTGATCTAAGATGAAAGCTTC
CGAACCATATCCCCCGAGTTTCAATACTGACCTGTGCGGTCTGTTTATCT
TGGTTAGTGGTTTCACCTCTCCCCCTTCCCTGCCCTCCCCCTTCTCTTGA
ACGCAACGCCTTCTCCTCTGTGTACCCGTATTGTGGTGCCCGGTCGACGG
CATGGTAAAGGTGGACAAGGACACAGGCTTTGTGACGAGAAACATCCTAT
GCGAGCCTATCAGAGTGAGGATCCCTAATCGTGCTCAAATATACGACAGT
GCGCGATACATACAGGCGTAGCATCTATTTAAGGGGCGATGTCGGGCTGT
AGGTATACATACCCTCGAGGGAGAAGCACAAGTCCCGCAGGGGATGGGGC
CAACGCCGAGGGGGTAGTCATGAAAAAATTGATACCTTTGTCAGAGGCGA
TGATCCTTCATTCATTGGCCTACGGGGGGGGTGGACTGGCAGGGGCGGGG
GTGGGGCAATGGCTCTTGAAGATGATCAACATAAAATATAGAAGGAAATT
TTGACGTGTTGGTGGCGAAAATGCTGAACAGTATGCAGCTATTTGTTCTG
GAGTACGACTATATGTATGTATAACTCAGAGACACGTTAGCGAGTACGTA
GGTAAGTGACTTCCTGAACGATTGCCTCCCCCGAGTCTAACAACGGCAGC
GATTTCCAATGATCCACCCCCCCCCCCCCCCTCCCCGCCCGCAGCTACTT
CTGTCTTCCTAACCGTTTCCTTGCTCACCCCTCCCCAAACAAACGCGGCT
TTAAAAATGTGGTAACGGTTCTGTACCCAAAACTTGAAAAATCGCAGTCG
CGACAAGGGGGGAACGTTGTAGCTGTCCTGCAGATGGTGAACAAGAAGAA
TCGAAAAGATTTCACGGAACAGGTGAGCCTGAAATTAGTCATTAATCTCC
TGAGGGGAGCGGGGCGATCGATTTGTCCTTTTATGTATCATCGGGTCGGA
ACTAGCCCTGTTCCGATAATATTCCTGTTAGCGAAGACTGTCCCCGTAAA
CTCTATACTTGAAAAAGAAATGATTCGGGAAATGACAAAAGAGTTCCGAT
TTCTCACGGTTTGGTGAATTATCTGGATTGCTCAATCTCGTAACCTAGCA
AATATCCTTGCCTTTTTATGACAGGGATTATCAACAGCTCCCCCCCCCCT
CCCTAGGCCGTACAGCATACCCTTCGCAGTGGATAGTATCGCACGGCAAC
GGCAGTGCGCTTTCGCGAAGGTAACATTATTGTGGGGACACCCATGTAGC
CACCAGTGTTTCCCACTGAGAACTCGTTCACATGCACACCCAATCCAAAA
CGCCGACACCTCGTAGAAAAACGAGCCACCAAAAACGCCCCAACAAAGCA
ACCAAACGGGGAAAATATACGTGACTCATTTCAAACAATAGCCGGTAAAA
GCACAACACGCTCCGCCCTCCGGCTATAATTCGGGCTGGACAACAACAAC
AACAACAACAACAACAACAACAACAACATACCTCGTTCCTCCACCTCGCC
GTGACGATAAGCTATCCCTACATAACCAACCGCTTTTTTTGTATTTCACA
GGATTCCACAGTGATGGAAATGTGCGTAGTCAAAGTAGCCCACGCTCTGG
ACACTTGCTTCGCAGCCCTAATCGCCGCCGAAGCCAAGTGGGCCAAATCC
GTGGGGCGCACTTACAGTCAGTCGGGCGGGGGGGACGACGACGACGCCGT
TGCAGCGGCGGCAGCAGCAGCTATGGACATGGTTGGTATCATTGGAGATG
TGGATAGTTGGAGCGAAAGTTGGGACGAAGGGCGGTACGGAAGTTTTGGA
GGTGGTGGCGGCGGAGAGGTACGGGTTATATCGATTTAAAGTCTGCTGTT
GTGTGTAGGTAGACACATCGGATAGATACATACCTACCTCCGTTTTTGTC
GGCCGCTTTTGTCGTGTTTTCTAACCTATATTCTTGAACTTTTTTCTTCT
CTCTATCTTTTCCCCTCTTCTATCTCCTACCCTTTTCACTTTTTAAACTG
AAATTATTTCTTTTCCAATCAACCATATCCTCTACAGTTCCGTGAGACAG
TGCATGGACCGCAGATCTCGAACAGGCGTGGTAGCGGGAGTTCGCATGAA
GATCACGAGAAGCTCAGGCGAAGGACTGAGTATGGGAATGAGGTACGCAA
C
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Coding sequence (CDS) from alignment at H-paniculata_contig11724:210..4360+

>mRNA_H-paniculata_contig11724.1104.1 ID=mRNA_H-paniculata_contig11724.1104.1|Name=mRNA_H-paniculata_contig11724.1104.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1380bp|location=Sequence derived from alignment at H-paniculata_contig11724:210..4360+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGATACCATAGGTTGCGAGCGCGCCACGCTCATGTTCATGAACACACC
TGCTCAGATGGATACCATAGGTTGCGAGCGCGCCACGCTCATGTTCATGA
ACACACCTGCTCAGGAGATGTTCTTCTTCGACGGAGAGCAGCGCATTGTT
TTCCCTATTAATAAGGGCATCGCGGGGCACTGTGCGACGACGGGCATCGC
GGTAGTCGCTAACGACCCCTACTCGCACCCCCATTTCAATCCTCAGGAGA
TGTTCTTCTTCGACGGAGAGCAGCGCATTGTTTTCCCTATTAATAAGGGC
ATCGCGGGGCACTGTGCGACGACGGGCATCGCGGTAGTCGCTAACGACCC
CTACTCGCACCCCCATTTCAATCCTCAGGTGGACAAGGACACAGGCTTTG
TGACGAGAAACATCCTATGCGAGCCTATCAGAGTGGACAAGGACACAGGC
TTTGTGACGAGAAACATCCTATGCGAGCCTATCAGATCGCGACAAGGGGG
GAACGTTGTAGCTGTCCTGCAGATGGTGAACAAGAAGAATCGAAAAGATT
TCACGGAACAGTCGCGACAAGGGGGGAACGTTGTAGCTGTCCTGCAGATG
GTGAACAAGAAGAATCGAAAAGATTTCACGGAACAGGATTCCACAGTGAT
GGAAATGTGCGTAGTCAAAGTAGCCCACGCTCTGGACACTTGCTTCGCAG
CCCTAATCGCCGCCGAAGCCAAGTGGGCCAAATCCGTGGGGCGCACTTAC
AGTCAGTCGGGCGGGGGGGACGACGACGACGCCGTTGCAGCGGCGGCAGC
AGCAGCTATGGACATGGTTGGTATCATTGGAGATGTGGATAGTTGGAGCG
AAAGTTGGGACGAAGGGCGGTACGGAAGTTTTGGAGGTGGTGGCGGCGGA
GAGGATTCCACAGTGATGGAAATGTGCGTAGTCAAAGTAGCCCACGCTCT
GGACACTTGCTTCGCAGCCCTAATCGCCGCCGAAGCCAAGTGGGCCAAAT
CCGTGGGGCGCACTTACAGTCAGTCGGGCGGGGGGGACGACGACGACGCC
GTTGCAGCGGCGGCAGCAGCAGCTATGGACATGGTTGGTATCATTGGAGA
TGTGGATAGTTGGAGCGAAAGTTGGGACGAAGGGCGGTACGGAAGTTTTG
GAGGTGGTGGCGGCGGAGAGACAGTGCATGGACCGCAGATCTCGAACAGG
CGTGGTAGCGGGAGTTCGCATGAAGATCACGAGAAGCTCAGGCGAAGGAC
TGAGTATGGGAATGAGGTACGCAACACAGTGCATGGACCGCAGATCTCGA
ACAGGCGTGGTAGCGGGAGTTCGCATGAAGATCACGAGAAGCTCAGGCGA
AGGACTGAGTATGGGAATGAGGTACGCAAC
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