prot_H-paniculata_contig4325.11035.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4325.11035.1
Unique Nameprot_H-paniculata_contig4325.11035.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length66
Homology
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BLAST of mRNA_H-paniculata_contig4325.11035.1 vs. uniprot
Match: D7FHZ0_ECTSI (Phosphorylated adapter RNA export protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHZ0_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 2.970e-21
Identity = 48/63 (76.19%), Postives = 56/63 (88.89%), Query Frame = 0 
Query:    1 MPTVDGARKRTAGGVFFTLLKQHMEPARLKALYADEVRVKKERERKRRATNKRKAEMEDAGDE 63
            MPT DG+RKRTAGGVFFTLLK+HMEP+RLK LYADE+RVKKE++R RRA NKRKAE   AG++
Sbjct:  248 MPTADGSRKRTAGGVFFTLLKKHMEPSRLKELYADELRVKKEKDRARRAANKRKAEAALAGED 310
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4325.11035.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHZ0_ECTSI2.970e-2176.19Phosphorylated adapter RNA export protein n=2 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 39..60
IPR019385Phosphorylated adapter RNA export protein, RNA-binding domainPFAMPF10258RNA_GG_bindcoord: 1..36
e-value: 1.8E-8
score: 34.3
IPR038092Phosphorylated adapter RNA export protein, RNA-binding domain superfamilyGENE3D1.10.10.1440coord: 1..50
e-value: 1.1E-8
score: 36.8
IPR039047Phosphorylated adapter RNA export proteinPANTHERPTHR13135CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26coord: 1..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4325contigH-paniculata_contig4325:15428..15625 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4325.11035.1mRNA_H-paniculata_contig4325.11035.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4325 15428..15640 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4325.11035.1 ID=prot_H-paniculata_contig4325.11035.1|Name=mRNA_H-paniculata_contig4325.11035.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=66bp
MPTVDGARKRTAGGVFFTLLKQHMEPARLKALYADEVRVKKERERKRRAT
NKRKAEMEDAGDEAPL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019385PHAX_RNA-binding_domain
IPR038092PHAX_RNA-binding_sf
IPR039047PHAX