mRNA_H-paniculata_contig4325.11034.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4325.11034.1 vs. uniprot
Match: A0A835Z9U1_9STRA (Alpha-tubulin N-acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9U1_9STRA) HSP 1 Score: 158 bits (399), Expect = 5.210e-46 Identity = 85/180 (47.22%), Postives = 112/180 (62.22%), Query Frame = 1
Query: 1 MEPCSSPRLFGPGISSWGAQRAGALNPEESSEFQRVLNEMGQLSSKAQGLSSVLTTANKLQEGSDRVYVLCDE-NGDAVQGFLRLGTKHLFLYPDDGRSMFEEDVLCVLDFYVHES---VQRKGKGFSLFNSALKSEGVSPTEIAYDRPSPKLPPFLSKHFGLENGLDQPNRFMVFKEFF 528
ME CS+ FGPG+S W L+ ++ L E+G LS++AQGL +TT +L R+YV+CDE G G+LR+G K L+L D + D LC+LDFYVH QR+G G LFN+ LKSE V+ ++AYDRPSPKL PFL +H+GL G+DQPNRFMVF ++F
Sbjct: 1 MELCSA--TFGPGLSVWDTTTPRQLSAQQQDVATAALAELGALSAQAQGLKEPITTLQQLVTSEHRLYVMCDEVTGRTCYGYLRVGVKRLYL-TDGAAPLRPRDALCLLDFYVHHRQVWCQRQGMGRRLFNAMLKSENVTAEQLAYDRPSPKLRPFLKRHYGLAQGIDQPNRFMVFPQYF 177
BLAST of mRNA_H-paniculata_contig4325.11034.1 vs. uniprot
Match: D7FHZ1_ECTSI (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHZ1_ECTSI) HSP 1 Score: 129 bits (324), Expect = 6.730e-36 Identity = 60/78 (76.92%), Postives = 66/78 (84.62%), Query Frame = 1
Query: 295 MFEEDVLCVLDFYVHESVQRKGKGFSLFNSALKSEGVSPTEIAYDRPSPKLPPFLSKHFGLENGLDQPNRFMVFKEFF 528
M E+D +C+LDFYVHESVQR+G G LF SALK EG++PTEIAYDRPSPKL PFL KHFGL N LDQPNRFMVFKE F
Sbjct: 1 MIEKDTMCLLDFYVHESVQRRGLGLDLFKSALKEEGLTPTEIAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMVFKEHF 78
BLAST of mRNA_H-paniculata_contig4325.11034.1 vs. uniprot
Match: A0A8J5E736_9DIPT (Alpha-tubulin N-acetyltransferase n=1 Tax=Bradysia odoriphaga TaxID=1564500 RepID=A0A8J5E736_9DIPT) HSP 1 Score: 134 bits (338), Expect = 1.010e-35 Identity = 70/151 (46.36%), Postives = 102/151 (67.55%), Query Frame = 1
Query: 82 EESSEFQRVLNEMGQLSSKAQGLSSVLTTANKLQEGSDRVYVLCDENGD--AVQGFLRLGTKHLFLYPDDGRSMFEEDVLCVLDFYVHESVQRKGKGFSLFNSALKSEGVSPTEIAYDRPSPKLPPFLSKHFGLENGLDQPNRFMVFKEFF 528
+ +S+ ++NEMG+ S++AQGL+ +TTA KL+ VY+L + G AV G L++GTK+L+++ +G + + CVLDFYVHES QR G G LF + L SEG++PT++A DRPS KL FL KH+GLE + Q N F+V++ FF
Sbjct: 36 DTTSKITEIINEMGESSARAQGLTRAVTTAQKLRNSDQVVYLLRENIGKNGAVTGLLKVGTKNLYVFDPNGETK-QVSAPCVLDFYVHESRQRSGLGKQLFQTMLDSEGINPTKLAIDRPSEKLVGFLKKHYGLERTIPQMNNFVVYEGFF 185
BLAST of mRNA_H-paniculata_contig4325.11034.1 vs. uniprot
Match: UPI00187D9A49 (alpha-tubulin N-acetyltransferase-like isoform X1 n=3 Tax=Bradysia coprophila TaxID=38358 RepID=UPI00187D9A49) HSP 1 Score: 134 bits (338), Expect = 2.280e-34 Identity = 70/151 (46.36%), Postives = 102/151 (67.55%), Query Frame = 1
Query: 82 EESSEFQRVLNEMGQLSSKAQGLSSVLTTANKLQEGSDRVYVLCDENGD--AVQGFLRLGTKHLFLYPDDGRSMFEEDVLCVLDFYVHESVQRKGKGFSLFNSALKSEGVSPTEIAYDRPSPKLPPFLSKHFGLENGLDQPNRFMVFKEFF 528
+ +S+ ++NEMG+ S++AQGL+ +TTA KL+ VY+L + G AV G L++GTK+L+++ +G + + CVLDFYVHES QR G G LF + L SEG++PT++A DRPS KL FL KH+GLE + Q N F+V++ FF
Sbjct: 36 DTTSKITEIINEMGESSARAQGLTRAVTTAQKLRNSDQVVYLLRENIGKNGAVTGLLKVGTKNLYVFDPNGETK-QVSAPCVLDFYVHESRQRSGLGKQLFQTMLDSEGINPTKLAIDRPSEKLVGFLKKHYGLERTIPQMNNFVVYEGFF 185
BLAST of mRNA_H-paniculata_contig4325.11034.1 vs. uniprot
Match: UPI0006B6FC0A (alpha-tubulin N-acetyltransferase 1 n=1 Tax=Pseudopodoces humilis TaxID=181119 RepID=UPI0006B6FC0A) HSP 1 Score: 130 bits (326), Expect = 4.670e-34 Identity = 75/161 (46.58%), Postives = 102/161 (63.35%), Query Frame = 1
Query: 55 AQRAGALNPEE-SSEFQRVLNEMGQLSSKAQGLSSVLTTANKLQEGSDRVYVLCDENGD--AVQGFLRLGTKHLFLYPDDGRSMFEEDVLCVLDFYVHESVQRKGKGFSLFNSALKSEGVSPTEIAYDRPSPKLPPFLSKHFGLENGLDQPNRFMVFKEFF 528
A R G EE + + V++E+G+ S+KAQGLS+ +T+A +++ +Y+L D AV GFL++G K LFL DG S E + LCVLDFY+HES QR+G G LF L+ E V P ++A DRPS KL FL KHFGL N + Q N F++F+ FF
Sbjct: 25 AGRGGTAKREELEQQLRTVIDELGKASAKAQGLSTPVTSAARMESNRHVLYILRDTRSPKGAVLGFLKVGYKKLFLLDRDG-SHVEVEPLCVLDFYIHESQQRRGLGMELFREMLQRERVQPEKLAVDRPSEKLLGFLRKHFGLCNLIPQVNNFVIFEGFF 184
BLAST of mRNA_H-paniculata_contig4325.11034.1 vs. uniprot
Match: UPI000D625DB6 (alpha-tubulin N-acetyltransferase 1 n=1 Tax=Cynoglossus semilaevis TaxID=244447 RepID=UPI000D625DB6) HSP 1 Score: 133 bits (334), Expect = 8.530e-34 Identity = 72/162 (44.44%), Postives = 101/162 (62.35%), Query Frame = 1
Query: 55 AQRAGALNPEESSEFQRVLNEMGQLSSKAQGLSSVLTTANKLQEGSDRVYVLCDENGDA----VQGFLRLGTKHLFLYPDDGRSMFEEDVLCVLDFYVHESVQRKGKGFSLFNSALKSEGVSPTEIAYDRPSPKLPPFLSKHFGLENGLDQPNRFMVFKEFF 528
A+ PE S +++E+G+ S+KAQ LS+ +T+A+KLQ ++Y+L D + V GFL++GTK LFL G + E + LCVLDFYV E QR G G LFN L+ + + P ++AYDRPSPKL FL+KH+GL + Q N F+VF+ FF
Sbjct: 24 AENRXXXRPEHLSHIAAIIDEIGRASAKAQQLSASITSASKLQTQRHQLYLLKDRESNGGRGVVVGFLKVGTKKLFLLDQQGAHI-EAEPLCVLDFYVAEKFQRHGYGLELFNFMLQHKNLEPVQMAYDRPSPKLQSFLAKHYGLTQSVPQVNNFVVFEGFF 184
BLAST of mRNA_H-paniculata_contig4325.11034.1 vs. uniprot
Match: A0A7S1DU42_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DU42_HEMAN) HSP 1 Score: 130 bits (328), Expect = 1.070e-33 Identity = 75/170 (44.12%), Postives = 97/170 (57.06%), Query Frame = 1
Query: 22 RLFGPGISSWGAQRAGALNPEESSEFQRVLNEMGQLSSKAQGLSSVLTTANKLQEGSDRVYVLCDENGDA-VQGFLRLGTKHLFLYPDDGRSMFEEDVLCVLDFYVHESVQRKGKGFSLFNSALKSEGVSPTEIAYDRPSPKLPPFLSKHFGLENGLDQPNRFMVFKEFF 528
RL IS A+ ++P +++++EMG S+ AQGL SV+TT ++ R+YV GD V G L++G K LF+ M E D LCVLDFYVHES+QR G G LF L EGV P + YDRPSPKL F+ KH+ L N Q N F+VF E+F
Sbjct: 33 RLLPERISVIAAESLDRMSPSLRGSLEKIVDEMGTRSATAQGLGSVITTVKRMMHTDQRLYVA---RGDRHVHGILKVGRKKLFIRHSGVNKMSEIDPLCVLDFYVHESMQRGGIGKQLFEEMLSREGVQPHMLGYDRPSPKLIGFMRKHYNLANYEPQANNFVVFAEYF 199
BLAST of mRNA_H-paniculata_contig4325.11034.1 vs. uniprot
Match: V9L6E1_CALMI (Alpha-tubulin N-acetyltransferase 1 n=2 Tax=Callorhinchus milii TaxID=7868 RepID=V9L6E1_CALMI) HSP 1 Score: 127 bits (320), Expect = 7.960e-33 Identity = 70/158 (44.30%), Postives = 99/158 (62.66%), Query Frame = 1
Query: 67 GALNPEESSEFQRVLNEMGQLSSKAQGLSSVLTTANKLQEGSDRVYVLCDENGD----AVQGFLRLGTKHLFLYPDDGRSMFEEDVLCVLDFYVHESVQRKGKGFSLFNSALKSEGVSPTEIAYDRPSPKLPPFLSKHFGLENGLDQPNRFMVFKEFF 528
G+ + + V+N MG+ S+KAQ LS+ +TTA++++ ++YVL D + V GFL++G K LF+ GR E D LCVLDFYVHE++QR G G LF+ L+ EGV P +A DRPS K FL KH+GL++ + Q N F+VF+ FF
Sbjct: 31 GSYRSDLDEQLVTVINRMGEASAKAQLLSASITTASRMRTNKHKLYVLRDSRANHGRGVVIGFLKVGYKKLFVLDPHGRQN-EMDTLCVLDFYVHEALQRHGHGRELFDHMLQYEGVEPRHLAIDRPSNKFLCFLRKHYGLDSAIPQVNNFVVFEGFF 187
BLAST of mRNA_H-paniculata_contig4325.11034.1 vs. uniprot
Match: UPI0011AECA73 (alpha-tubulin N-acetyltransferase 1 isoform X1 n=2 Tax=Taeniopygia guttata TaxID=59729 RepID=UPI0011AECA73) HSP 1 Score: 127 bits (318), Expect = 8.190e-33 Identity = 74/164 (45.12%), Postives = 102/164 (62.20%), Query Frame = 1
Query: 55 AQRAGALNPEESSEFQR----VLNEMGQLSSKAQGLSSVLTTANKLQEGSDRVYVLCDENGD--AVQGFLRLGTKHLFLYPDDGRSMFEEDVLCVLDFYVHESVQRKGKGFSLFNSALKSEGVSPTEIAYDRPSPKLPPFLSKHFGLENGLDQPNRFMVFKEFF 528
A R G E + ++ V++E+G+ S+KAQGLS+ +T+A +++ +Y+L D AV GFL++G K LFL DG S E + LCVLDFYVHES QR+G G LF L+ E ++P +A DRPSPKL FL KHFGL + Q N F++F+ FF
Sbjct: 26 AGRGGXXXXEREQQLEQRLRTVIDELGKASAKAQGLSTPVTSAARMESNRHVLYMLRDTRPPRGAVLGFLKVGYKKLFLLDQDG-SHVEVEPLCVLDFYVHESQQRRGLGRELFREMLQRERMAPQRLAVDRPSPKLLGFLDKHFGLCRPIPQVNNFVIFEGFF 188
BLAST of mRNA_H-paniculata_contig4325.11034.1 vs. uniprot
Match: A0A0K0DZ97_STRER (Alpha-tubulin N-acetyltransferase n=1 Tax=Strongyloides stercoralis TaxID=6248 RepID=A0A0K0DZ97_STRER) HSP 1 Score: 125 bits (315), Expect = 1.900e-32 Identity = 69/159 (43.40%), Postives = 99/159 (62.26%), Query Frame = 1
Query: 73 LNPEESSEFQRVLNEMGQLSSKAQGLSSVLTTANKL--QEGSDRVYVLCDENGD-----AVQGFLRLGTKHLFLYPDDGRSMFEEDVLCVLDFYVHESVQRKGKGFSLFNSALKSEGVSPTEIAYDRPSPKLPPFLSKHFGLENGLDQPNRFMVFKEFF 528
LNP++ ++ +NEMGQLS AQGL VLT+ K+ E +YV+ +N + V G L++G K L+LY DD +E LCVLDFYVH ++QRKG G +F L++E +SP ++A D+PS L F+ K++ LEN + Q F+V+KEFF
Sbjct: 26 LNPKKYWGVEKAINEMGQLSMTAQGLRRVLTSYQKIIDTEEEQTLYVMWKKNPNNEKHSIVVGILKVGRKKLYLY-DDKLQRYEVTPLCVLDFYVHNTLQRKGNGHKIFEEMLRNENISPIDLAIDKPSESLLQFMKKYYNLENPIWQSTNFVVYKEFF 183 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4325.11034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4325.11034.1 >prot_H-paniculata_contig4325.11034.1 ID=prot_H-paniculata_contig4325.11034.1|Name=mRNA_H-paniculata_contig4325.11034.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=176bp MEPCSSPRLFGPGISSWGAQRAGALNPEESSEFQRVLNEMGQLSSKAQGLback to top mRNA from alignment at H-paniculata_contig4325:12541..14201+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4325.11034.1 ID=mRNA_H-paniculata_contig4325.11034.1|Name=mRNA_H-paniculata_contig4325.11034.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1661bp|location=Sequence derived from alignment at H-paniculata_contig4325:12541..14201+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4325:12541..14201+ >mRNA_H-paniculata_contig4325.11034.1 ID=mRNA_H-paniculata_contig4325.11034.1|Name=mRNA_H-paniculata_contig4325.11034.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1056bp|location=Sequence derived from alignment at H-paniculata_contig4325:12541..14201+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |