prot_H-paniculata_contig43234.11031.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig43234.11031.1
Unique Nameprot_H-paniculata_contig43234.11031.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length120
Homology
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BLAST of mRNA_H-paniculata_contig43234.11031.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 7.310e-63
Identity = 102/112 (91.07%), Postives = 107/112 (95.54%), Query Frame = 0 
Query:    7 GAVTATRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKEARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVNK 118
            G  + TRSAKAGLQFPVGR+GRFLK+GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNK+ARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK  K
Sbjct:   10 GKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 121
[Close]
BLAST of mRNA_H-paniculata_contig43234.11031.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 4.210e-62
Identity = 102/112 (91.07%), Postives = 107/112 (95.54%), Query Frame = 0 
Query:    7 GAVTATRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKEARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVNK 118
            G  + TRSAKAGLQFPVGR+GRFLK+GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNK+ARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK  K
Sbjct:   55 GKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 166
[Close]
BLAST of mRNA_H-paniculata_contig43234.11031.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 1.500e-59
Identity = 95/104 (91.35%), Postives = 102/104 (98.08%), Query Frame = 0 
Query:   12 TRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKEARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 115
            +RSAKAGLQFPVGRIGRF+KQGKY+SRVG GAPVY+AAVLEYLTAEVLELAGNAARDNK+ARIVPRHIQLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKK
Sbjct:   15 SRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_H-paniculata_contig43234.11031.1 vs. uniprot
Match: A0A7S3K2Q9_9STRA (Histone H2A n=4 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K2Q9_9STRA)

HSP 1 Score: 188 bits (477), Expect = 1.940e-59
Identity = 95/104 (91.35%), Postives = 102/104 (98.08%), Query Frame = 0 
Query:   12 TRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKEARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 115
            T+SAKAGLQFPVGRIGRFLKQGKYA+RVGAGAPVYLAAVLEYL AE+LELAGNAARDNK++RI+PRH+QLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKK
Sbjct:   21 TKSAKAGLQFPVGRIGRFLKQGKYATRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGSVTIASGGVLPNIHAVLLPKK 124
[Close]
BLAST of mRNA_H-paniculata_contig43234.11031.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 3.560e-59
Identity = 96/109 (88.07%), Postives = 105/109 (96.33%), Query Frame = 0 
Query:    7 GAVTATRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKEARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 115
            G  + ++S+KAGLQFPV RIGR+LK+GKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNK+ARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:   10 GKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_H-paniculata_contig43234.11031.1 vs. uniprot
Match: A0A061QUG5_9CHLO (Histone H2A n=4 Tax=core chlorophytes TaxID=2692248 RepID=A0A061QUG5_9CHLO)

HSP 1 Score: 186 bits (471), Expect = 1.400e-58
Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 0 
Query:    6 AGAVTATRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKEARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVNK 118
            AG    +RSAKAGLQFPVGR+ R+LK+GKYA+R+GAGAPVYLAAVLEYLTAEVLELAGNAARDNK+ RIVPRHIQLAVRNDEEL+KLLG+VTIASGGVLPNIH+VLLPKK +K
Sbjct:   11 AGKKAVSRSAKAGLQFPVGRVARYLKKGKYATRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIASGGVLPNIHSVLLPKKSDK 123
[Close]
BLAST of mRNA_H-paniculata_contig43234.11031.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 1.770e-58
Identity = 96/109 (88.07%), Postives = 105/109 (96.33%), Query Frame = 0 
Query:    7 GAVTATRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKEARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 115
            G  + ++S+KAGLQFPV RIGR+LK+GKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNK+ARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:   61 GKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 169
[Close]
BLAST of mRNA_H-paniculata_contig43234.11031.1 vs. uniprot
Match: H2A_CHLRE (Histone H2A n=45 Tax=Chlamydomonadales TaxID=3042 RepID=H2A_CHLRE)

HSP 1 Score: 184 bits (466), Expect = 6.900e-58
Identity = 94/104 (90.38%), Postives = 100/104 (96.15%), Query Frame = 0 
Query:   12 TRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKEARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 115
            +RSAKAGLQFPVGRI R+LK+GKYA R+GAGAPVYLAAVLEYLTAEVLELAGNAARDNK+ RIVPRHIQLA+RNDEEL KLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:   16 SRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKNRIVPRHIQLAIRNDEELGKLLGEVTIASGGVLPNIHAVLLPKK 119
[Close]
BLAST of mRNA_H-paniculata_contig43234.11031.1 vs. uniprot
Match: A8HWM8_CHLRE (Histone H2A n=17 Tax=Chlamydomonadales TaxID=3042 RepID=A8HWM8_CHLRE)

HSP 1 Score: 184 bits (466), Expect = 7.600e-58
Identity = 94/104 (90.38%), Postives = 100/104 (96.15%), Query Frame = 0 
Query:   12 TRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKEARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 115
            +RSAKAGLQFPVGRI R+LK+GKYA R+GAGAPVYLAAVLEYLTAEVLELAGNAARDNK+ RIVPRHIQLA+RNDEEL KLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:   16 SRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKNRIVPRHIQLAIRNDEELGKLLGEVTIASGGVLPNIHAVLLPKK 119
[Close]
BLAST of mRNA_H-paniculata_contig43234.11031.1 vs. uniprot
Match: A0A1E7EZ55_9STRA (Histone H2A n=3 Tax=Bacillariophyta TaxID=2836 RepID=A0A1E7EZ55_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.690e-57
Identity = 92/111 (82.88%), Postives = 104/111 (93.69%), Query Frame = 0 
Query:    9 VTATRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKEARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVNKA 119
            V+ T SAKAGLQFPVGRIGR+L+QGKYA+R+GAGAPVYLAAVLEYL AE+LELAGNAARDNK++RI+PRHI LAV+NDEELNKLLG+VTIA GGVLPNIHAVLLPKK  K+
Sbjct:   16 VSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIIPRHITLAVKNDEELNKLLGDVTIAQGGVLPNIHAVLLPKKSQKS 126
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig43234.11031.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI9_ECTSI7.310e-6391.07Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D7G193_ECTSI4.210e-6291.07Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D8LLP0_ECTSI1.500e-5991.35Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A7S3K2Q9_9STRA1.940e-5991.35Histone H2A n=4 Tax=Aureoumbra lagunensis TaxID=44... [more]
A0A6H5KG79_9PHAE3.560e-5988.07Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A061QUG5_9CHLO1.400e-5884.07Histone H2A n=4 Tax=core chlorophytes TaxID=269224... [more]
D7FVQ5_ECTSI1.770e-5888.07Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
H2A_CHLRE6.900e-5890.38Histone H2A n=45 Tax=Chlamydomonadales TaxID=3042 ... [more]
A8HWM8_CHLRE7.600e-5890.38Histone H2A n=17 Tax=Chlamydomonadales TaxID=3042 ... [more]
A0A1E7EZ55_9STRA1.690e-5782.88Histone H2A n=3 Tax=Bacillariophyta TaxID=2836 Rep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 53..66
score: 90.54
coord: 67..81
score: 69.33
coord: 38..53
score: 90.36
coord: 95..113
score: 76.04
coord: 9..31
score: 63.93
IPR002119Histone H2ASMARTSM00414h2a4coord: 2..118
e-value: 1.3E-73
score: 260.5
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 13..84
e-value: 4.9E-14
score: 52.8
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 87..118
e-value: 6.8E-19
score: 67.3
IPR009072Histone-foldGENE3D1.10.20.10coord: 2..119
e-value: 4.3E-59
score: 199.9
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 12..115
NoneNo IPR availablePANTHERPTHR23430:SF251coord: 4..116
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 4..116
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 17..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig43234contigH-paniculata_contig43234:1021..1380 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig43234.11031.1mRNA_H-paniculata_contig43234.11031.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig43234 1021..1380 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig43234.11031.1 ID=prot_H-paniculata_contig43234.11031.1|Name=mRNA_H-paniculata_contig43234.11031.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=120bp
LARERAGAVTATRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAV
LEYLTAEVLELAGNAARDNKEARIVPRHIQLAVRNDEELNKLLGEVTIAS
GGVLPNIHAVLLPKKVNKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR007125Histone_H2A/H2B/H3
IPR032454Histone_H2A_C
IPR009072Histone-fold
IPR032458Histone_H2A_CS