prot_H-paniculata_contig432.11025.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig432.11025.1
Unique Nameprot_H-paniculata_contig432.11025.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length420
Homology
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BLAST of mRNA_H-paniculata_contig432.11025.1 vs. uniprot
Match: D7FVY4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVY4_ECTSI)

HSP 1 Score: 225 bits (574), Expect = 1.380e-66
Identity = 156/348 (44.83%), Postives = 218/348 (62.64%), Query Frame = 0 
Query:    4 IGDSVSTSSSGMAAANNNSQAGRLASTLLAKHVRTLEVLYSLQRENAKIRQEGQEKSDEEESQRMVAEAVAAAVAGPNKLVAELQSQIEKLLEKVGRLEKDLCFAKETSANILGQASSQMDELRIAKEKLQVKCSDLEFKAEDQAQQVFLRGELVSKLSVAAAALLEEEKKTSDLMGRLKDSEAISGSLRGRIKEREKSISLMQATESSLRTSVDAKEIRVSGLETRARELQENLDAADTTRKIADSRLAQALRGADSARKELADRASIEQELLEKADKLSARADAAESKLAEERTRSQRLHEEGKRRLEEGTTKYNETLASFTLEREQLLNRVDALSHELLTLRAHM 351
            +GD+     +G++     +  G++AS LLAKHVRTLEVL+SLQ+ NA++RQ+ Q+KS EEE QR +AEA+AAAVA PN L  ELQ+Q EKL E+V  LE++L  AK+T+   L  A+SQM+ LR     LQ KC DLEF+A    +Q+  +GE+ S L   + AL   E + SDL  RL D E+ S +L+ R+KE +  I  M+  E+ L   VD  + +++ L+ +AR+LQE L  A+        RL QALR   ++R+E  +    EQE L  A +  +R +AAE+KL+EER R QR  E+ KR+LEE   +Y   L     ERE+LL R+DAL  E  ++RAHM
Sbjct:    5 VGDTSVKGVAGLSYGGTATNVGKVASALLAKHVRTLEVLHSLQKSNAQLRQDIQDKSGEEEVQRRIAEAIAAAVAAPNDLSEELQAQGEKLRERVAGLEQELISAKQTAEKSLDNANSQMESLRKMNVTLQKKCEDLEFEAASHERQISQQGEVESHLRETSVALSLAEGRASDLARRLADQESTSSTLQLRLKENDDKIFAMKEAETILTAEVDESKTQLARLDGQARDLQEKLRVAEAEHGQLGVRLEQALRDLATSREENKEMVEKEQESLAGAAEQKSRVNAAEAKLSEERKRFQRFREDAKRKLEEEARRYKAALMEHAYERERLLVRIDALLREAESMRAHM 352
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig432.11025.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVY4_ECTSI1.380e-6644.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 45..65
NoneNo IPR availableCOILSCoilCoilcoord: 273..307
NoneNo IPR availableCOILSCoilCoilcoord: 116..150
NoneNo IPR availableCOILSCoilCoilcoord: 217..251
NoneNo IPR availableCOILSCoilCoilcoord: 84..104
NoneNo IPR availableCOILSCoilCoilcoord: 323..343

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig432contigH-paniculata_contig432:7252..14042 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig432.11025.1mRNA_H-paniculata_contig432.11025.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig432 7252..14042 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig432.11025.1 ID=prot_H-paniculata_contig432.11025.1|Name=mRNA_H-paniculata_contig432.11025.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=420bp
MGAIGDSVSTSSSGMAAANNNSQAGRLASTLLAKHVRTLEVLYSLQRENA
KIRQEGQEKSDEEESQRMVAEAVAAAVAGPNKLVAELQSQIEKLLEKVGR
LEKDLCFAKETSANILGQASSQMDELRIAKEKLQVKCSDLEFKAEDQAQQ
VFLRGELVSKLSVAAAALLEEEKKTSDLMGRLKDSEAISGSLRGRIKERE
KSISLMQATESSLRTSVDAKEIRVSGLETRARELQENLDAADTTRKIADS
RLAQALRGADSARKELADRASIEQELLEKADKLSARADAAESKLAEERTR
SQRLHEEGKRRLEEGTTKYNETLASFTLEREQLLNRVDALSHELLTLRAH
MNNNRPQFSKYVEAKTENCQLKEELDGLREMIPAPRPSHRSISNGYGTNV
IVERLRHSISVARSTAITTN
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