mRNA_H-paniculata_contig432.11025.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig432.11025.1 vs. uniprot
Match: D7FVY4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVY4_ECTSI) HSP 1 Score: 225 bits (574), Expect = 1.380e-66 Identity = 156/348 (44.83%), Postives = 218/348 (62.64%), Query Frame = 1
Query: 10 IGDSVSTSSSGMAAANNNSQAGRLASTLLAKHVRTLEVLYSLQRENAKIRQEGQEKSDEEESQRMVAEAVAAAVAGPNKLVAELQSQIEKLLEKVGRLEKDLCFAKETSANILGQASSQMDELRIAKEKLQVKCSDLEFKAEDQAQQVFLRGELVSKLSVAAAALLEEEKKTSDLMGRLKDSEAISGSLRGRIKEREKSISLMQATESSLRTSVDAKEIRVSGLETRARELQENLDAADTTRKIADSRLAQALRGADSARKELADRASIEQELLEKADKLSARADAAESKLAEERTRSQRLHEEGKRRLEEGTTKYNETLASFTLEREQLLNRVDALSHELLTLRAHM 1053
+GD+ +G++ + G++AS LLAKHVRTLEVL+SLQ+ NA++RQ+ Q+KS EEE QR +AEA+AAAVA PN L ELQ+Q EKL E+V LE++L AK+T+ L A+SQM+ LR LQ KC DLEF+A +Q+ +GE+ S L + AL E + SDL RL D E+ S +L+ R+KE + I M+ E+ L VD + +++ L+ +AR+LQE L A+ RL QALR ++R+E + EQE L A + +R +AAE+KL+EER R QR E+ KR+LEE +Y L ERE+LL R+DAL E ++RAHM
Sbjct: 5 VGDTSVKGVAGLSYGGTATNVGKVASALLAKHVRTLEVLHSLQKSNAQLRQDIQDKSGEEEVQRRIAEAIAAAVAAPNDLSEELQAQGEKLRERVAGLEQELISAKQTAEKSLDNANSQMESLRKMNVTLQKKCEDLEFEAASHERQISQQGEVESHLRETSVALSLAEGRASDLARRLADQESTSSTLQLRLKENDDKIFAMKEAETILTAEVDESKTQLARLDGQARDLQEKLRVAEAEHGQLGVRLEQALRDLATSREENKEMVEKEQESLAGAAEQKSRVNAAEAKLSEERKRFQRFREDAKRKLEEEARRYKAALMEHAYERERLLVRIDALLREAESMRAHM 352 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig432.11025.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig432.11025.1 >prot_H-paniculata_contig432.11025.1 ID=prot_H-paniculata_contig432.11025.1|Name=mRNA_H-paniculata_contig432.11025.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=420bp MGAIGDSVSTSSSGMAAANNNSQAGRLASTLLAKHVRTLEVLYSLQRENAback to top mRNA from alignment at H-paniculata_contig432:7252..14042+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig432.11025.1 ID=mRNA_H-paniculata_contig432.11025.1|Name=mRNA_H-paniculata_contig432.11025.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6791bp|location=Sequence derived from alignment at H-paniculata_contig432:7252..14042+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig432:7252..14042+ >mRNA_H-paniculata_contig432.11025.1 ID=mRNA_H-paniculata_contig432.11025.1|Name=mRNA_H-paniculata_contig432.11025.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2520bp|location=Sequence derived from alignment at H-paniculata_contig432:7252..14042+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |