mRNA_H-paniculata_contig4318.11023.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4318.11023.1 vs. uniprot
Match: A0A6H5KD56_9PHAE (SufE domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD56_9PHAE) HSP 1 Score: 278 bits (711), Expect = 5.810e-86 Identity = 167/335 (49.85%), Postives = 213/335 (63.58%), Query Frame = 3
Query: 3 MIRRVPLLAAALATSLCSAGEAFVTSGTLARALHTQHDATQQQRRHLPGGVFT--QAAVATRYQTYPAPRTALRRACFEQR--MSQSVEITDLCLTPQLERMTKAFKAAPNDKLRHVQLLEMAGMAPPIDPALKTEENEVPGCLSRVYVAAEAKRGLIFYTIDSDSMLTKGLAAVL-AEGLSGNSAEAIQAVKPYFVKMAGLSTSLTPGRTNGFLNMLKVMKLKAKSLA---------EEADRQAEAGDWIEEPSKTPMADQIKSKLEQLNPEYLTIADESDGEESKFMIMVVSKAFEGLNTLKRHRQVYGILDEEMKIVHAVTLQTKTPEEVGL 965
M+ R +L+ AL+TS+CS GE+FVT +PGG F+ +AA A R + A R+ + MS S ++ L LTP+LER+TK F++ P DK+R +QLL + M +DPAL+TEEN+V GCLS VYVAAE K GLI+Y+ DSD+M+TKG A +L A GLSGNS EAIQ VKP F+++AGL SL GR NGF+NML+ MK KA +L E+A AE E MA ++ KL++L P L I DES GEESKFMI +VSK+FEGL LKRHR VYG++ +EMKIVHAVTL TKTPEE G+
Sbjct: 1 MVARAAILSVALSTSVCSVGESFVTPNVAV----------------VPGGAFSSHRAAQAARSRRPAAXXXXXXRSGRDDAPLMSTSTDLKQLGLTPELERLTKVFRSCPTDKMRQMQLLHLTQMGDKMDPALQTEENKVLGCLSTVYVAAEVKDGLIYYSTDSDAMITKGSARLLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLAAGRNNGFINMLRTMKGKALALGGESAIRAAMEQAAPAAETAAPEEAEESGTMASRVTEKLQKLEPLKLVIEDESGGEESKFMIKIVSKSFEGLTLLKRHRSVYGLMADEMKIVHAVTLDTKTPEEAGM 319
BLAST of mRNA_H-paniculata_contig4318.11023.1 vs. uniprot
Match: A0A836CLM4_9STRA (Cysteine desulfuration protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLM4_9STRA) HSP 1 Score: 208 bits (529), Expect = 4.900e-59 Identity = 132/286 (46.15%), Postives = 174/286 (60.84%), Query Frame = 3
Query: 165 AAVA-TRYQTYPAPRTALRRACFEQRMSQSVEITDLCLTPQLERMTKAFKAAPNDKLRHVQLLEMAGMAPPIDPALKTEENEVPGCLSRVYVAAEAKRGLIFYTIDSDSMLTKGLAAVLAEGLSGNSAEAIQAVKPYFVKMAGLSTSLTPGRTNGFLNMLKVMKLKAKSLAEE------------------ADRQAEAGDWIEEPSKTPMADQIKSKLEQLNPEYLTIADESDGEESKFMIMVVSKAFEGLNTLKRHRQVYGILDEEMKIVHAVTLQTKTPEEVGL 965
AAVA +R Q+Y A + RR MS + I +L LT +LER+ KAF++ P+DK+R+ QLL MA + KT +N+V GCLS V+V A+ K+G +++ DSD+ LTKGL ++L GLSGN+A IQ+VKP F+++AGL TSLTPGR NGF+NML MK KA AD + + E P K PM I KL+ L P L + DES+ +E KF I VVS AFEGL +KRH+ V+ + +EMK VHAV L TKTP E+GL
Sbjct: 38 AAVAVSRTQSYTA---SARRRAAPLLMSTAPSIQELGLTRELERLVKAFRSMPDDKMRYKQLLFMAAQGAELPSEFKTTDNKVQGCLSTVHVVAKMKQGKVYFEGDSDAQLTKGLLSILIRGLSGNAAADIQSVKPEFIQVAGLQTSLTPGRNNGFINMLSTMKRKALQAEXXXXXXXXXXXXXXXXXXXXADSEGDDMGVAEVPGK-PMTTAIMRKLQALRPVRLQVEDESE-DEQKFYIAVVSSAFEGLPLVKRHQLVHLTIADEMKQVHAVQLSTKTPAEMGL 318
BLAST of mRNA_H-paniculata_contig4318.11023.1 vs. uniprot
Match: A0A1Z5K9T0_FISSO (SufE domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9T0_FISSO) HSP 1 Score: 180 bits (456), Expect = 5.360e-49 Identity = 118/255 (46.27%), Postives = 153/255 (60.00%), Query Frame = 3
Query: 273 LTPQLERMTKAFKAAPNDKLRHVQLLEMAGMAPPIDPALKTEENEVPGCLSRVYV---AAEAKRGLIF--YTIDSDSMLTKGLAAVLAEGLSGNSAEAIQAVKPYFVKMAGLSTSLTPGRTNGFLNMLKVMKLKAKSLAEEADRQAE---------AGDWIEEPSKTPMADQIKSKLEQLNPEYLTIADES-----------DGEESKFMIMVVSKAFEGLNTLKRHRQVYGILDEEMKIVHAVTLQTKTPEEVG 962
LTP+L ++ AF++ +DKLR+ QLL MA PIDP+ EN+VPGCLS VYV A + G+I + DSD +LTKGL A+L GLSGN+AE IQ V P F++ G++ SLTPGR NGFLNML VMK+KAK L EA+ QA AGD + PM I L+ L P L + D S DGE + F + +V+ AFEGLN +KRH+ VY +L + M +HA+ + KTPEEV
Sbjct: 24 LTPELLKIANAFESIGDDKLRYKQLLYMATQLSPIDPSQAIPENKVPGCLSTVYVDGTAVDKGDGVIRIEFVGDSDGLLTKGLVALLVRGLSGNTAEDIQNVDPGFIQKTGIAASLTPGRNNGFLNMLNVMKIKAKQL--EANYQATGPSESATTTAGD------EKPMYQAIVQGLQALKPVSLKLEDVSYQHAGHREASKDGE-THFNLEIVASAFEGLNLVKRHKLVYMLLGDVMPRIHALQISAKTPEEVN 269
BLAST of mRNA_H-paniculata_contig4318.11023.1 vs. uniprot
Match: A0A7S1UZE5_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZE5_9STRA) HSP 1 Score: 180 bits (456), Expect = 1.030e-48 Identity = 116/272 (42.65%), Postives = 150/272 (55.15%), Query Frame = 3
Query: 201 PRTALRRACFEQRMSQSVEITDLCLTPQLERMTKAFKAAPNDKLRHVQLLEMAGMAPPIDPALKTEENEVPGCLSRVYVAA------EAKRGLIFYTIDSDSMLTKGLAAVLAEGLSGNSAEAIQAVKPYFVKMAGLSTSLTPGRTNGFLNMLKVMKLKAKSLAEEADRQAEA-GDWIEEPSKTPMADQIKSKLEQLNPEYLTIADESDGE-----------ESKFMIMVVSKAFEGLNTLKRHRQVYGILDEEMKIVHAVTLQTKTPEEVG 962
P A +R S V L LT +L +T AFK + LR+ QLL MAG PPI PA EN+VPGCLS VYV E K +I + +SD ++TKGL A+L GLSG +AEAI V P F+ AG++ LTPGR NGFLNML VMK KA L A AEA G ++ PM + + + L+ L P L + D SD ES F + VVS FEGL ++RH+ +Y +L + M +HA+ ++ KTPEEV
Sbjct: 22 PSPATQRPSLVVVRSTEVAADPLGLTTELRAITNAFKMVDDANLRNKQLLYMAGELPPISPAACVPENKVPGCLSTVYVDGTATYDEEKKANVINFVGESDGLMTKGLVALLIRGLSGETAEAINKVDPKFITEAGIAAGLTPGRNNGFLNMLAVMKKKALELDAAAKSGAEAPGGGVDLEGDRPMYNGMINALQILKPTKLILKDNSDQHAGHAGSKGYDGESHFELEVVSDTFEGLTLVQRHKVIYAVLGDIMDKIHALQIRAKTPEEVA 293
BLAST of mRNA_H-paniculata_contig4318.11023.1 vs. uniprot
Match: A0A7S3Q629_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q629_9STRA) HSP 1 Score: 181 bits (458), Expect = 1.050e-48 Identity = 111/267 (41.57%), Postives = 156/267 (58.43%), Query Frame = 3
Query: 240 MSQSVEITDLCLTPQLERMTKAFKAAPNDKLRHVQLLEMAGMAPPIDPALKTEENEVPGCLSRVYVAAEAKRG-----LIFYTIDSDSMLTKGLAAVLAEGLSGNSAEAIQAVKPYFVKMAGLSTSLTPGRTNGFLNMLKVMKLKAKSLA--------EEADRQAEAG-DWIEEPSKTPMADQIKSKLEQLNPEYLTIADES-------------DGEESKFMIMVVSKAFEGLNTLKRHRQVYGILDEEMKIVHAVTLQTKTPEEV 959
M+ + EI L LTP+LE+MTKAF + P++KLR+ QLL MA P+DP L EN+VPGCLS VYV A+ ++ + DSD LTKGL A+L G+SG +AE IQ V P F+ A ++ SLTPGR NGFLNML VMK KA S + EEAD E +E + PM + + L +L P L + D+S + ES F++ +V++ F+G+ +KRH+ +Y +L E M +HA+++ K P +V
Sbjct: 50 MADTSEIEALGLTPELEKMTKAFGSIPDEKLRYKQLLYMANQLKPLDPKLMVSENKVPGCLSTVYVDCTARDNEEGETVLDFVGDSDGQLTKGLVALLVRGMSGCTAEQIQKVDPEFINAAKITQSLTPGRNNGFLNMLAVMKAKATSYSVGADNSGGEEADADTEGVISSFDEIAGKPMYNDMMESLLKLKPVTLELIDDSASHAGHAGSKGWEESGESHFVLNMVAEVFDGMPLVKRHQLIYLVLGETMDKIHALSINAKAPSQV 316
BLAST of mRNA_H-paniculata_contig4318.11023.1 vs. uniprot
Match: M2XAG5_GALSU (Cysteine desulfuration protein SufE (Plastid) n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XAG5_GALSU) HSP 1 Score: 180 bits (456), Expect = 2.590e-48 Identity = 114/274 (41.61%), Postives = 159/274 (58.03%), Query Frame = 3
Query: 219 RACFEQRMSQSVEITDLCLTPQLERMTKAFKAAPNDKLRHVQLLEMAGMAPPIDPALKTEENEVPGCLSRVYVAAEAKRGLIFYTIDSDSMLTKGLAAVLAEGLSGNSAEAIQAVKPYFVKMAGLSTSLTPGRTNGFLNMLKVMKLKAKSLAEE-----------ADR--QAEAGDWIEEPSKTPMADQIKSKLEQLNPEYLTIADES------------DGEESKFMIMVVSKAFEGLNTLKRHRQVYGILDEEMKI-VHAVTLQTKTPEEVG 962
++ F ++ V+ L LTP+L R+ K+F AAP+ KLR QLL +A P+ KT EN+VPGCLS V+V + IF+ DSD+ LTKGL A+L +GL+G + E I+ + P FV +AGLS SLTPGR NGFLNML+ MK KAK A + +DR + +A E + P+ I KL++L P L + D+S E+ F + VVS AF GL+ +KRH+ VY +L +E+K +HA+ +Q KTP EV
Sbjct: 52 KSTFRLQIRCQVDEKKLGLTPELARLVKSFAAAPDPKLRVQQLLYLAQTLEPLPFQYKTNENKVPGCLSTVHVVGDCDNEKIFFKGDSDAQLTKGLLALLIKGLNGCTVEEIERISPEFVTVAGLSVSLTPGRNNGFLNMLQTMKNKAKEAASKLNGVSREGRNYSDRVPKTQASPSTAETASGPIYSAIVEKLQKLKPSRLEVHDDSFQHAGHVGAKGLRSSETHFSVYVVSDAFVGLSLVKRHQLVYTLLGQELKEGLHALRIQAKTPSEVS 325
BLAST of mRNA_H-paniculata_contig4318.11023.1 vs. uniprot
Match: A0A8J5XHT0_DIALT (SufE domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XHT0_DIALT) HSP 1 Score: 174 bits (442), Expect = 1.080e-46 Identity = 112/253 (44.27%), Postives = 151/253 (59.68%), Query Frame = 3
Query: 267 LCLTPQLERMTKAFKAAPNDKLRHVQLLEMAGMAPPIDPALKTEENEVPGCLSRVYVAAEA-KRGLIFYTIDSDSMLTKGLAAVLAEGLSGNSAEAIQAVKPYFVKMAGLSTSLTPGRTNGFLNMLKVMKLKAKSLA--------EEADRQAEAGDWIEEPSKTPMADQIKSK-LEQLNPEYLTIADESD------------GEESKFMIMVVSKAFEGLNTLKRHRQVYGILDEEMK-IVHAVTLQTKTPEE 956
L LTP+LE++ + FK P+ KLR+ QLL +A A P+D LK EN+VPGCLS V+V A A G IFYT DSD+MLTKGL +L +GLSG++A+ I AV P F++ AG++ SLTPGR NG LNML +MK KAK+LA A+ A + E P+AD I K L +L P + + D S E+ F + VVS F GL+ ++RH+ +Y +L EEM VHA+ + +T E
Sbjct: 40 LGLTPELEQVVEVFKMVPDQKLRYQQLLFLAQKAKPMDAVLKVPENKVPGCLSTVFVHATADSSGNIFYTGDSDAMLTKGLVVLLTDGLSGHTADEILAVDPKFIQEAGIAASLTPGRNNGLLNMLALMKQKAKALAGVAVPSGPSAANPSASPPAPVVEGGGAPVADSIIGKVLAKLKPTTVRLRDNSAQHAGHAGREGLAASETHFALEVVSDVFSGLSLVQRHQLIYALLAEEMAGSVHALQITARTTAE 292
BLAST of mRNA_H-paniculata_contig4318.11023.1 vs. uniprot
Match: A0A7S2ZLB0_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZLB0_9RHOD) HSP 1 Score: 174 bits (440), Expect = 1.930e-46 Identity = 113/257 (43.97%), Postives = 151/257 (58.75%), Query Frame = 3
Query: 252 VEITDLCLTPQLERMTKAFKAAPNDKLRHVQLLEMAGMAPPIDPALKTEENEVPGCLSRVYVAAEAKRGL--IFYTIDSDSMLTKGLAAVLAEGLSGNSAEAIQAVKPYFVKMAGLSTSLTPGRTNGFLNMLKVMKLKAKSLAEEA--------DRQAEAGDWIEEPSKTPMADQIKSKLEQLNPEYLTIADESD--------GEESKFMIMVVSKAFEGLNTLKRHRQVYGILDEEMKI----VHAVTLQTKTPEE 956
VE++ L LTP LE+M + K P+ K+R+ QLL A P++P LKTE N+VPGCLS V+V AE +++ DSD+ LTKGL ++L GLSG++A I+ V P F+K +GL+ SLTPGR NGF+NMLK+MK KA L EEA + E E P K P A I L QLNP L + D S+ G+E+ I VVS+AFE + + RH+ +Y +LD M VHA+ + TK P E
Sbjct: 35 VEMSSLNLTPALEKMVSSLKMFPDSKVRYQQLLHYASTLGPMEPELKTEMNKVPGCLSTVFVHAEMNPDTRKVYFKGDSDAQLTKGLVSMLVNGLSGSTALQIEKVNPDFIKASGLTVSLTPGRNNGFINMLKLMKRKAAVLDEEAAGLGPRSTGQTDEDAVEFEVPGK-PRATAIGRALMQLNPIELEVEDFSESHKGHAHAGDETHIRIKVVSEAFEDMPLVLRHKVIYTLLDSFMDKGSGGVHALQMDTKAPGE 290
BLAST of mRNA_H-paniculata_contig4318.11023.1 vs. uniprot
Match: A0A4D9DCV6_9STRA (SufE domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCV6_9STRA) HSP 1 Score: 174 bits (440), Expect = 3.330e-46 Identity = 104/254 (40.94%), Postives = 157/254 (61.81%), Query Frame = 3
Query: 243 SQSVEITDLCLTPQLERMTKAFKAAPNDKLRHVQLLEMAGMAPPIDPALKTEENEVPGCLSRVYVAAEAKRGLIFYTIDSDSMLTKGLAAVLAEGLSGNSAEAIQAVKPYFVKMAGLSTSLTPGRTNGFLNMLKVMKLKA---KSLAEEADRQAEAGDWIEEPSKTPMADQIKSKLEQLNPEYLTIADESD-----------GEESKFMIMVVSKAFEGLNTLKRHRQVYGILDEEMKIVHAVTLQTKTPEEVG 962
S ++ + L LTP+L +++AF+ +++ R LL +A P+ K EN+VPGCLS VYV A + G +++ DSD+ LTKGL A+L EG+SG SAE IQAVKP F+K AG++ SLTPGR NGFLNML ++K KA +S E A ++ A ++ E+ ++ + +K + L P+ L + D+S G ES F + +V+ FEGL+ ++RH+ VY +L EM+ +HA+++ KTP E G
Sbjct: 58 STDIDESSLGLTPRLFEVSRAFQLM-DERTRVQNLLALASSMKPMKDFRKLPENKVPGCLSTVYVHAFMQDGKVYFEGDSDAQLTKGLVALLIEGMSGCSAEEIQAVKPEFIKYAGIAASLTPGRNNGFLNMLAMLKRKAVEAESKGEGAGQEEPAVEFQEDIARPVYSSCMKKLINFLKPKRLEMQDDSAQHAGHAGAKGLGGESHFSLRIVADCFEGLSLVQRHKLVYTVLAAEMQQIHALSIDAKTPAEAG 310
BLAST of mRNA_H-paniculata_contig4318.11023.1 vs. uniprot
Match: A0A7S0BG18_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BG18_9RHOD) HSP 1 Score: 173 bits (438), Expect = 3.760e-46 Identity = 111/256 (43.36%), Postives = 151/256 (58.98%), Query Frame = 3
Query: 252 VEITDLCLTPQLERMTKAFKAAPNDKLRHVQLLEMAGMAPPIDPALKTEENEVPGCLSRVYVAAEAKRGL--IFYTIDSDSMLTKGLAAVLAEGLSGNSAEAIQAVKPYFVKMAGLSTSLTPGRTNGFLNMLKVMKLKAKSLAEEA------DRQAEAGDWIE-EPSKTPMADQIKSKLEQLNPEYLTIADESD--------GEESKFMIMVVSKAFEGLNTLKRHRQVYGILDEEMKI----VHAVTLQTKTPEE 956
VE++ L LTP LE+M + K P+ K+R+ QLL A P++P LKTE N+VPGCLS V+V A +++ DSD+ LTKGL ++L GLSG++A IQ V P F+K +GL+ SLTPGR NGF+NMLK+MK KA+ L EEA + GD +E E P A I L QLNP L + D S+ G+E+ I VVS AF+ ++ + RH+ +Y +LD M VHA+ + K P E
Sbjct: 35 VEMSSLNLTPALEKMVSSLKIFPDSKVRYQQLLHYATTLGPMEPELKTEANKVPGCLSTVFVHAVINPDTRKVYFKGDSDAQLTKGLVSMLVNGLSGSTALQIQKVNPEFIKSSGLTVSLTPGRNNGFMNMLKLMKHKAELLDEEAAGLGPGSKGQTDGDAVEFEVPGKPRATAIGRALMQLNPTELEVEDFSESHKGHAHAGDETHIRIKVVSDAFQDMSLVLRHKVIYKLLDSFMDKGDGGVHALQIDAKAPAE 290 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4318.11023.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4318.11023.1 >prot_H-paniculata_contig4318.11023.1 ID=prot_H-paniculata_contig4318.11023.1|Name=mRNA_H-paniculata_contig4318.11023.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=322bp MIRRVPLLAAALATSLCSAGEAFVTSGTLARALHTQHDATQQQRRHLPGGback to top mRNA from alignment at H-paniculata_contig4318:11751..15371- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4318.11023.1 ID=mRNA_H-paniculata_contig4318.11023.1|Name=mRNA_H-paniculata_contig4318.11023.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3621bp|location=Sequence derived from alignment at H-paniculata_contig4318:11751..15371- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4318:11751..15371- >mRNA_H-paniculata_contig4318.11023.1 ID=mRNA_H-paniculata_contig4318.11023.1|Name=mRNA_H-paniculata_contig4318.11023.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1932bp|location=Sequence derived from alignment at H-paniculata_contig4318:11751..15371- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |