prot_H-paniculata_contig4309.10999.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4309.10999.1
Unique Nameprot_H-paniculata_contig4309.10999.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length51
Homology
BLAST of mRNA_H-paniculata_contig4309.10999.1 vs. uniprot
Match: A0A2D4C8B9_PYTIN (Short-chain specific acyl-CoA dehydrogenase, mitochondrial n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8B9_PYTIN)

HSP 1 Score: 82.8 bits (203), Expect = 3.480e-19
Identity = 40/48 (83.33%), Postives = 44/48 (91.67%), Query Frame = 0
Query:    1 MGELGLMGVAISDDNGGTGLDYLAYAIAMEEISRGCASTGVIMSVNNV 48
            +GE+GLMGVA+ +  GG GLDYLAYAIAMEEISRGCASTGVIMSVNNV
Sbjct:   69 LGEMGLMGVAVDEQYGGAGLDYLAYAIAMEEISRGCASTGVIMSVNNV 116          
BLAST of mRNA_H-paniculata_contig4309.10999.1 vs. uniprot
Match: D8LNP1_ECTSI (Acyl-CoA dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP1_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 3.820e-19
Identity = 43/47 (91.49%), Postives = 47/47 (100.00%), Query Frame = 0
Query:    1 MGELGLMGVAISDDNGGTGLDYLAYAIAMEEISRGCASTGVIMSVNN 47
            +GELGLMGVAIS+++GGTGLDYLAYAIAMEEISRGCASTGVIMSVNN
Sbjct:   75 LGELGLMGVAISEEDGGTGLDYLAYAIAMEEISRGCASTGVIMSVNN 121          
BLAST of mRNA_H-paniculata_contig4309.10999.1 vs. uniprot
Match: A0A3Q0IYQ6_DIACI (short-chain specific acyl-CoA dehydrogenase, mitochondrial-like n=1 Tax=Diaphorina citri TaxID=121845 RepID=A0A3Q0IYQ6_DIACI)

HSP 1 Score: 80.1 bits (196), Expect = 1.130e-18
Identity = 40/47 (85.11%), Postives = 42/47 (89.36%), Query Frame = 0
Query:    1 MGELGLMGVAISDDNGGTGLDYLAYAIAMEEISRGCASTGVIMSVNN 47
            MGELGLMGV + +D GGTGLDYLAYAIA EEISRGCAS GVIMSVNN
Sbjct:   11 MGELGLMGVEVPEDLGGTGLDYLAYAIATEEISRGCASCGVIMSVNN 57          
BLAST of mRNA_H-paniculata_contig4309.10999.1 vs. uniprot
Match: A0A6P8XZD0_DROAB (short-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X1 n=1 Tax=Drosophila albomicans TaxID=7291 RepID=A0A6P8XZD0_DROAB)

HSP 1 Score: 83.2 bits (204), Expect = 2.190e-18
Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 0
Query:    1 MGELGLMGVAISDDNGGTGLDYLAYAIAMEEISRGCASTGVIMSVNN 47
            MGELGLMGVA+ ++ GGTGLDYLAYAIAMEEISRGCAS GVIMSVNN
Sbjct:   66 MGELGLMGVAVPEELGGTGLDYLAYAIAMEEISRGCASAGVIMSVNN 112          
BLAST of mRNA_H-paniculata_contig4309.10999.1 vs. uniprot
Match: V9IFY4_APICE (Short-chain specific acyl-CoA dehydrogenase n=1 Tax=Apis cerana TaxID=7461 RepID=V9IFY4_APICE)

HSP 1 Score: 78.2 bits (191), Expect = 1.260e-17
Identity = 38/47 (80.85%), Postives = 44/47 (93.62%), Query Frame = 0
Query:    1 MGELGLMGVAISDDNGGTGLDYLAYAIAMEEISRGCASTGVIMSVNN 47
            MGELGLM +AI ++ GGTGLDYLAYAIA+EEISRGCASTG+IMSV+N
Sbjct:   42 MGELGLMSIAIPENLGGTGLDYLAYAIALEEISRGCASTGLIMSVHN 88          
BLAST of mRNA_H-paniculata_contig4309.10999.1 vs. uniprot
Match: A0A653CTJ8_CALMS (Uncharacterized protein n=1 Tax=Callosobruchus maculatus TaxID=64391 RepID=A0A653CTJ8_CALMS)

HSP 1 Score: 83.6 bits (205), Expect = 1.260e-17
Identity = 42/47 (89.36%), Postives = 44/47 (93.62%), Query Frame = 0
Query:    1 MGELGLMGVAISDDNGGTGLDYLAYAIAMEEISRGCASTGVIMSVNN 47
            MGELGLM VAI ++ GGTGLDYLAYAIAMEEISRGCASTGVIMSVNN
Sbjct:   65 MGELGLMAVAIPEEYGGTGLDYLAYAIAMEEISRGCASTGVIMSVNN 111          
BLAST of mRNA_H-paniculata_contig4309.10999.1 vs. uniprot
Match: A0A8K0CEV4_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0CEV4_9COLE)

HSP 1 Score: 83.6 bits (205), Expect = 1.290e-17
Identity = 42/47 (89.36%), Postives = 44/47 (93.62%), Query Frame = 0
Query:    1 MGELGLMGVAISDDNGGTGLDYLAYAIAMEEISRGCASTGVIMSVNN 47
            MGELGLM VAI ++ GGTGLDYLAYAIAMEEISRGCASTGVIMSVNN
Sbjct:   70 MGELGLMAVAIPEEYGGTGLDYLAYAIAMEEISRGCASTGVIMSVNN 116          
BLAST of mRNA_H-paniculata_contig4309.10999.1 vs. uniprot
Match: A0A6P8XJE7_DROAB (short-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X2 n=2 Tax=Drosophila TaxID=32281 RepID=A0A6P8XJE7_DROAB)

HSP 1 Score: 83.2 bits (204), Expect = 1.770e-17
Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 0
Query:    1 MGELGLMGVAISDDNGGTGLDYLAYAIAMEEISRGCASTGVIMSVNN 47
            MGELGLMGVA+ ++ GGTGLDYLAYAIAMEEISRGCAS GVIMSVNN
Sbjct:   66 MGELGLMGVAVPEELGGTGLDYLAYAIAMEEISRGCASAGVIMSVNN 112          
BLAST of mRNA_H-paniculata_contig4309.10999.1 vs. uniprot
Match: A0A7S1NP91_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NP91_9EUGL)

HSP 1 Score: 82.8 bits (203), Expect = 2.630e-17
Identity = 40/47 (85.11%), Postives = 45/47 (95.74%), Query Frame = 0
Query:    1 MGELGLMGVAISDDNGGTGLDYLAYAIAMEEISRGCASTGVIMSVNN 47
            +GELG+MG+AISD+ GG G+DYLAYAIAMEEISRGCASTGVIMSVNN
Sbjct:   79 LGELGMMGMAISDEWGGAGMDYLAYAIAMEEISRGCASTGVIMSVNN 125          
BLAST of mRNA_H-paniculata_contig4309.10999.1 vs. uniprot
Match: A0A6L5CK89_9INSE (Acyl-CoA_dh_N domain-containing protein (Fragment) n=1 Tax=Ephemera danica TaxID=1049336 RepID=A0A6L5CK89_9INSE)

HSP 1 Score: 77.4 bits (189), Expect = 2.980e-17
Identity = 38/47 (80.85%), Postives = 41/47 (87.23%), Query Frame = 0
Query:    1 MGELGLMGVAISDDNGGTGLDYLAYAIAMEEISRGCASTGVIMSVNN 47
            MGELGLM V + +  GGTGLDYLAYA+AMEEISRGCAS GVIMSVNN
Sbjct:   21 MGELGLMAVDVPESFGGTGLDYLAYAVAMEEISRGCASAGVIMSVNN 67          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4309.10999.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D4C8B9_PYTIN3.480e-1983.33Short-chain specific acyl-CoA dehydrogenase, mitoc... [more]
D8LNP1_ECTSI3.820e-1991.49Acyl-CoA dehydrogenase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A3Q0IYQ6_DIACI1.130e-1885.11short-chain specific acyl-CoA dehydrogenase, mitoc... [more]
A0A6P8XZD0_DROAB2.190e-1887.23short-chain specific acyl-CoA dehydrogenase, mitoc... [more]
V9IFY4_APICE1.260e-1780.85Short-chain specific acyl-CoA dehydrogenase n=1 Ta... [more]
A0A653CTJ8_CALMS1.260e-1789.36Uncharacterized protein n=1 Tax=Callosobruchus mac... [more]
A0A8K0CEV4_9COLE1.290e-1789.36Uncharacterized protein n=1 Tax=Ignelater luminosu... [more]
A0A6P8XJE7_DROAB1.770e-1787.23short-chain specific acyl-CoA dehydrogenase, mitoc... [more]
A0A7S1NP91_9EUGL2.630e-1785.11Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A6L5CK89_9INSE2.980e-1780.85Acyl-CoA_dh_N domain-containing protein (Fragment)... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013786Acyl-CoA dehydrogenase/oxidase, N-terminalPFAMPF02771Acyl-CoA_dh_Ncoord: 1..47
e-value: 6.6E-13
score: 49.3
IPR037069Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamilyGENE3D1.10.540.10coord: 1..49
e-value: 2.4E-14
score: 55.3
NoneNo IPR availablePANTHERPTHR43884:SF12SHORT-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIALcoord: 1..48
NoneNo IPR availablePANTHERPTHR43884FAMILY NOT NAMEDcoord: 1..48
IPR009100Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamilySUPERFAMILY56645Acyl-CoA dehydrogenase NM domain-likecoord: 1..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4309contigH-paniculata_contig4309:2897..3549 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4309.10999.1mRNA_H-paniculata_contig4309.10999.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4309 2897..3558 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4309.10999.1 ID=prot_H-paniculata_contig4309.10999.1|Name=mRNA_H-paniculata_contig4309.10999.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=51bp
MGELGLMGVAISDDNGGTGLDYLAYAIAMEEISRGCASTGVIMSVNNVSD
T
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013786AcylCoA_DH/ox_N
IPR037069AcylCoA_DH/ox_N_sf
IPR009100AcylCoA_DH/oxidase_NM_dom