prot_H-paniculata_contig4305.10993.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4305.10993.1
Unique Nameprot_H-paniculata_contig4305.10993.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length617
Homology
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BLAST of mRNA_H-paniculata_contig4305.10993.1 vs. uniprot
Match: D7FTX4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTX4_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 1.690e-24
Identity = 118/270 (43.70%), Postives = 146/270 (54.07%), Query Frame = 0 
Query:  344 VSAPATPVMVYTYPHGYMMAYTQARTP--QQP--TVSQA--AWNPYECVSPAGEVPTAQQGFSRVRADRPHQESPSIVSREGSPVLTGEDQTGATSACTKDSVRDLGSFSSSASMQAREYSSRASSTSNLSDVIDRGFDEENDPAPTLADRKPLLPEPLKLGDDQEGLTSARQVSPPETPVRTR-------GSSAQGEDDKENMRDSQGGVLRNGKEGSGSSSVESTPEEQLSGKKR-GGD-SIEKQKSFTGSYFQVSPASFLQPSKRQR 598
            +SAP TPVMVY   HGYMMAY     P  Q P  T SQA  AW+PYECVSP+GE  +   GF R   + P       +S EGSPV        A S  ++ S+   G      + Q     SRASS   +SDVI+ G    +D     A  +P L  P  L    EG T     S  +TP+R R       G +A   +DKEN +    G +  GK+  G + +E+  ++QLSG+KR GGD  IEKQKSFTGSYFQVSP+SFLQ SKRQR
Sbjct:  131 MSAPVTPVMVYAPGHGYMMAYPPVNVPSVQTPRSTRSQASKAWDPYECVSPSGE--STHAGFGRRGKETPD------LSPEGSPVALSS----AMSVSSRGSLSKQGGRGDDDASQGLR--SRASSV--ISDVIEGGV-LNDDSRQNKASSQPSLANPALL--PLEGKTDNEDGSY-KTPIRLRLSCETSAGGTATDGEDKENSQVG-AGFVGGGKKREGEAVLEA--KKQLSGQKRAGGDIDIEKQKSFTGSYFQVSPSSFLQSSKRQR 377
[Close]
BLAST of mRNA_H-paniculata_contig4305.10993.1 vs. uniprot
Match: A0A6H5KL22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL22_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 2.510e-9
Identity = 66/148 (44.59%), Postives = 88/148 (59.46%), Query Frame = 0 
Query:  459 SRASSTSNLSDVIDRGFDEENDPAPTLADRKPLLPEPLKLGDDQEGLTSARQVSPPETPVRTR--------GSSAQGEDDKENMRDSQGGVLRNGKEGSGSSSVESTPEEQLSGKKRGGDSIEKQKSFTGSYFQVSPASFLQPSKRQR 598
            SRASS   +SDVI+ G    +D     A+ +P L  P  L    EG T     S  +TP R R        G++A G D KEN +    G++  GK+  G +++E+  ++Q+SG+KR G  IEKQKSFTGSYFQVSP+SFL+ SKRQR
Sbjct:   26 SRASSV--ISDVIEGGG-LNDDSRQNKANSQPSLAIPALL--PLEGKTDNEDGSY-KTPSRVRLSCETSAGGTAADGAD-KENSQVG-AGLVGGGKKREGDAALEA--KKQISGQKRTGGDIEKQKSFTGSYFQVSPSSFLKSSKRQR 163
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4305.10993.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTX4_ECTSI1.690e-2443.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KL22_9PHAE2.510e-944.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 166..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4305contigH-paniculata_contig4305:6248..12580 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4305.10993.1mRNA_H-paniculata_contig4305.10993.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4305 1412..14859 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4305.10993.1 ID=prot_H-paniculata_contig4305.10993.1|Name=mRNA_H-paniculata_contig4305.10993.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=617bp
MNGRNMAPQKDLPSAASTPAPPLLPPPVLSAAQQGHLRQILREREVNGHQ
QIHERSAAPRRGGVVGEVHRNNYPQIRQTTAGAAGTEGGYKLPSPSHEQF
QMRHHHQQQQQHTDAAAQQQHQQRLTVAAVPHYATMAIAVPSPHAVTVHG
APSPVVPVYSSFSEALREQQKQQQQARALAHQFQQQQQHAPAYHQGQSQL
QQQQHDVRPTGSGGHVGHSPSMPVTSTGGALHHVPLPHARQAHDHAQQQP
QQQQQQQPRQQVLHRRPLNLPDDNAQHGQLHGRPSPSQELPQQPRFFQGA
ATPVMGLHHQTMVSPAHKAVGGDHTAPAAPPTPLHVLSSQAASVSAPATP
VMVYTYPHGYMMAYTQARTPQQPTVSQAAWNPYECVSPAGEVPTAQQGFS
RVRADRPHQESPSIVSREGSPVLTGEDQTGATSACTKDSVRDLGSFSSSA
SMQAREYSSRASSTSNLSDVIDRGFDEENDPAPTLADRKPLLPEPLKLGD
DQEGLTSARQVSPPETPVRTRGSSAQGEDDKENMRDSQGGVLRNGKEGSG
SSSVESTPEEQLSGKKRGGDSIEKQKSFTGSYFQVSPASFLQPSKRQRGD
SHDADDTSVRIQASDS*
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