prot_H-paniculata_contig4303.10990.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4303.10990.1
Unique Nameprot_H-paniculata_contig4303.10990.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length77
Homology
BLAST of mRNA_H-paniculata_contig4303.10990.1 vs. uniprot
Match: B7ZGM7_9PHAE (60S ribosomal protein L36 (Fragment) n=3 Tax=Phaeophyceae TaxID=2870 RepID=B7ZGM7_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 8.960e-41
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 0
Query:    1 RLGVRVKLVREVVREVAGLMPYEKRILDMIKTGGASAEKRIYKFAKRRLGTHKRALAKREDIKGVYSKMRARQAMT 76
            RLG RVK+VREVVREVAGLMPYEKRILDMIKTGGASAEKRIYKFAKRRLGTHKRALAKREDIK VYSKMRARQAMT
Sbjct:   35 RLGKRVKMVREVVREVAGLMPYEKRILDMIKTGGASAEKRIYKFAKRRLGTHKRALAKREDIKEVYSKMRARQAMT 110          
BLAST of mRNA_H-paniculata_contig4303.10990.1 vs. uniprot
Match: F0YH51_AURAN (60S ribosomal protein L36 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YH51_AURAN)

HSP 1 Score: 120 bits (300), Expect = 8.870e-34
Identity = 60/75 (80.00%), Postives = 69/75 (92.00%), Query Frame = 0
Query:    1 RLGVRVKLVREVVREVAGLMPYEKRILDMIKTGGASAEKRIYKFAKRRLGTHKRALAKREDIKGVYSKMRARQAM 75
            RL  R K+VREVVREVAGL+PYEKRILDMIKTGGAS+EKR+YKFAK RLGTHKRA+ KRED+K +Y++MRARQAM
Sbjct:   21 RLSARTKVVREVVREVAGLVPYEKRILDMIKTGGASSEKRMYKFAKMRLGTHKRAIKKREDMKDIYAQMRARQAM 95          
BLAST of mRNA_H-paniculata_contig4303.10990.1 vs. uniprot
Match: A0A6V1KD91_HETAK (60S ribosomal protein L36 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KD91_HETAK)

HSP 1 Score: 119 bits (298), Expect = 2.400e-33
Identity = 57/73 (78.08%), Postives = 68/73 (93.15%), Query Frame = 0
Query:    3 GVRVKLVREVVREVAGLMPYEKRILDMIKTGGASAEKRIYKFAKRRLGTHKRALAKREDIKGVYSKMRARQAM 75
            G RV +VREV+REV+GLMPYE+R+LDM+KTGG  +EKRIYKFAKRRLGTHKRALAKRE++KG+Y K+RARQAM
Sbjct:   34 GKRVAVVREVIREVSGLMPYERRMLDMVKTGGVGSEKRIYKFAKRRLGTHKRALAKREEVKGIYGKIRARQAM 106          
BLAST of mRNA_H-paniculata_contig4303.10990.1 vs. uniprot
Match: A0A835YST3_9STRA (60S ribosomal protein L36 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YST3_9STRA)

HSP 1 Score: 118 bits (295), Expect = 6.120e-33
Identity = 60/73 (82.19%), Postives = 67/73 (91.78%), Query Frame = 0
Query:    1 RLGVRVKLVREVVREVAGLMPYEKRILDMIKTGGASAEKRIYKFAKRRLGTHKRALAKREDIKGVYSKMRARQ 73
            RLG RV +VR+VVREVAGLMPYEKRILDMIK GGASAEKR+YKFAK+RLGTHKRALAKR+DIK +Y+K RA Q
Sbjct:   28 RLGKRVSVVRQVVREVAGLMPYEKRILDMIKVGGASAEKRMYKFAKKRLGTHKRALAKRDDIKDMYAKQRAHQ 100          
BLAST of mRNA_H-paniculata_contig4303.10990.1 vs. uniprot
Match: B8BZT3_THAPS (60S ribosomal protein L36 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZT3_THAPS)

HSP 1 Score: 116 bits (290), Expect = 3.860e-32
Identity = 60/74 (81.08%), Postives = 66/74 (89.19%), Query Frame = 0
Query:    1 RLGVRVKLVREVVREVAGLMPYEKRILDMIKTGGASAEKRIYKFAKRRLGTHKRALAKREDIKGVYSKMRARQA 74
            RLG R  L RE+ REVAGL PYE+RILDMIKTGG+SA+KRIYKFAKRRLG+HKRALAKREDIK V SKMRA+QA
Sbjct:   31 RLGKRTALCREIAREVAGLSPYERRILDMIKTGGSSADKRIYKFAKRRLGSHKRALAKREDIKAVNSKMRAKQA 104          
BLAST of mRNA_H-paniculata_contig4303.10990.1 vs. uniprot
Match: K0T5I4_THAOC (60S ribosomal protein L36 n=2 Tax=Thalassiosirales TaxID=33847 RepID=K0T5I4_THAOC)

HSP 1 Score: 112 bits (280), Expect = 1.290e-30
Identity = 56/74 (75.68%), Postives = 66/74 (89.19%), Query Frame = 0
Query:    1 RLGVRVKLVREVVREVAGLMPYEKRILDMIKTGGASAEKRIYKFAKRRLGTHKRALAKREDIKGVYSKMRARQA 74
            +LG R  L RE+ REVAGL PYE+RILDMIKTGG++A+KRIYKFAKRRLG+HKRA+AKREDIK + SKMRA+QA
Sbjct:   31 KLGKRTALCREIAREVAGLSPYERRILDMIKTGGSAADKRIYKFAKRRLGSHKRAVAKREDIKAINSKMRAKQA 104          
BLAST of mRNA_H-paniculata_contig4303.10990.1 vs. uniprot
Match: K8YZ07_NANGC (60S ribosomal protein L36 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YZ07_NANGC)

HSP 1 Score: 112 bits (280), Expect = 1.290e-30
Identity = 56/70 (80.00%), Postives = 65/70 (92.86%), Query Frame = 0
Query:    5 RVKLVREVVREVAGLMPYEKRILDMIKTGGASAEKRIYKFAKRRLGTHKRALAKREDIKGVYSKMRARQA 74
            +VKLVREVVR+V GLMPYEKRILD+IKTGG+ AEK++YKFAKRRLGTH+RAL KRE+IK  YSK+RARQA
Sbjct:   35 KVKLVREVVRDVVGLMPYEKRILDVIKTGGSGAEKKVYKFAKRRLGTHRRALKKREEIKEYYSKLRARQA 104          
BLAST of mRNA_H-paniculata_contig4303.10990.1 vs. uniprot
Match: A0A5D6XYW5_9STRA (60S ribosomal protein L36 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYW5_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.920e-29
Identity = 54/74 (72.97%), Postives = 66/74 (89.19%), Query Frame = 0
Query:    1 RLGVRVKLVREVVREVAGLMPYEKRILDMIKTGGASAEKRIYKFAKRRLGTHKRALAKREDIKGVYSKMRARQA 74
            R G ++KLVR VVREV GLMPYEKRILDMIK+GG+SAEKRIYKF+K+RLGTH+RAL KRE++K  Y+ +RA+QA
Sbjct:   64 RAGKKIKLVRSVVREVVGLMPYEKRILDMIKSGGSSAEKRIYKFSKKRLGTHRRALQKREEMKAYYAALRAKQA 137          
BLAST of mRNA_H-paniculata_contig4303.10990.1 vs. uniprot
Match: A0A6U3YL72_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3YL72_9STRA)

HSP 1 Score: 108 bits (270), Expect = 3.820e-29
Identity = 52/71 (73.24%), Postives = 67/71 (94.37%), Query Frame = 0
Query:    5 RVKLVREVVREVAGLMPYEKRILDMIKTGGASAEKRIYKFAKRRLGTHKRALAKREDIKGVYSKMRARQAM 75
            +V+LVR+V+REV+GL+ YE+R++DM+KTGGASAEKR+YKFAK+RLG+HKRAL KREDIK VYS+MRA+ AM
Sbjct:   32 KVELVRDVIREVSGLLQYERRLMDMLKTGGASAEKRMYKFAKKRLGSHKRALKKREDIKDVYSRMRAKAAM 102          
BLAST of mRNA_H-paniculata_contig4303.10990.1 vs. uniprot
Match: A0A485L033_9STRA (60S ribosomal protein L36 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L033_9STRA)

HSP 1 Score: 109 bits (272), Expect = 4.250e-29
Identity = 54/74 (72.97%), Postives = 64/74 (86.49%), Query Frame = 0
Query:    1 RLGVRVKLVREVVREVAGLMPYEKRILDMIKTGGASAEKRIYKFAKRRLGTHKRALAKREDIKGVYSKMRARQA 74
            R G + K VR +VREV GLMPYEKRILDMIK+GG+SAEKRIYKF+K+RLGTHKRALAKRE++K  Y+  RA+QA
Sbjct:   55 RAGKKTKFVRAIVREVVGLMPYEKRILDMIKSGGSSAEKRIYKFSKKRLGTHKRALAKREEMKAYYAAQRAKQA 128          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4303.10990.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B7ZGM7_9PHAE8.960e-4196.0560S ribosomal protein L36 (Fragment) n=3 Tax=Phaeo... [more]
F0YH51_AURAN8.870e-3480.0060S ribosomal protein L36 n=1 Tax=Aureococcus anop... [more]
A0A6V1KD91_HETAK2.400e-3378.0860S ribosomal protein L36 n=1 Tax=Heterosigma akas... [more]
A0A835YST3_9STRA6.120e-3382.1960S ribosomal protein L36 n=1 Tax=Tribonema minus ... [more]
B8BZT3_THAPS3.860e-3281.0860S ribosomal protein L36 n=1 Tax=Thalassiosira ps... [more]
K0T5I4_THAOC1.290e-3075.6860S ribosomal protein L36 n=2 Tax=Thalassiosirales... [more]
K8YZ07_NANGC1.290e-3080.0060S ribosomal protein L36 n=3 Tax=Monodopsidaceae ... [more]
A0A5D6XYW5_9STRA1.920e-2972.9760S ribosomal protein L36 n=1 Tax=Pythium brassicu... [more]
A0A6U3YL72_9STRA3.820e-2973.24Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A485L033_9STRA4.250e-2972.9760S ribosomal protein L36 n=1 Tax=Aphanomyces stel... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038097Ribosomal protein L36e domain superfamilyGENE3D1.10.10.1760coord: 4..72
e-value: 7.6E-26
score: 91.8
IPR000509Ribosomal protein L36ePFAMPF01158Ribosomal_L36ecoord: 3..70
e-value: 1.2E-23
score: 83.2
IPR000509Ribosomal protein L36ePANTHERPTHR1011460S RIBOSOMAL PROTEIN L36coord: 5..71
IPR000509Ribosomal protein L36ePROSITEPS01190RIBOSOMAL_L36Ecoord: 21..31
NoneNo IPR availablePANTHERPTHR10114:SF060S RIBOSOMAL PROTEIN L36coord: 5..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4303contigH-paniculata_contig4303:13782..14298 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4303.10990.1mRNA_H-paniculata_contig4303.10990.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4303 13782..14298 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4303.10990.1 ID=prot_H-paniculata_contig4303.10990.1|Name=mRNA_H-paniculata_contig4303.10990.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp
RLGVRVKLVREVVREVAGLMPYEKRILDMIKTGGASAEKRIYKFAKRRLG
THKRALAKREDIKGVYSKMRARQAMT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038097L36e_sf
IPR000509Ribosomal_L36e