prot_H-paniculata_contig430.10985.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig430.10985.1
Unique Nameprot_H-paniculata_contig430.10985.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length89
Homology
BLAST of mRNA_H-paniculata_contig430.10985.1 vs. uniprot
Match: D8LRZ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRZ0_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 1.350e-25
Identity = 51/83 (61.45%), Postives = 63/83 (75.90%), Query Frame = 0
Query:    6 FFEISPPIDRDIFLGIVHEVLESSLLMFAPFGLPRGLRQAAGNEASFLRQYGPRFRLILEAVSEMVYSSRGVSESEMAVTLHK 88
            FFE+  P+D   FL +  EVL  SLL+ APFGLPR LR+A G+E  F+R YGPRFR ILEAVS++ Y  RGV+ES++AVTLHK
Sbjct:    5 FFEVVEPLDHATFLSVCDEVLRDSLLVLAPFGLPRHLREALGSEKEFIRLYGPRFRFILEAVSDVTYKERGVTESQVAVTLHK 87          
BLAST of mRNA_H-paniculata_contig430.10985.1 vs. uniprot
Match: A0A835YUV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUV6_9STRA)

HSP 1 Score: 104 bits (259), Expect = 4.170e-24
Identity = 49/85 (57.65%), Postives = 63/85 (74.12%), Query Frame = 0
Query:    4 ANFFEISPPIDRDIFLGIVHEVLESSLLMFAPFGLPRGLRQAAGNEASFLRQYGPRFRLILEAVSEMVYSSRGVSESEMAVTLHK 88
             +FF++  P+D   FL    EVLE+SL++FAP GLP  L++   +EA FL  YGPRFR ILEAVSE VY +RG+SESEM+VT+HK
Sbjct:   37 GDFFQVVAPLDLSTFLSATREVLETSLMLFAPLGLPPLLKRICPSEAGFLETYGPRFRAILEAVSEAVYEARGISESEMSVTIHK 121          
BLAST of mRNA_H-paniculata_contig430.10985.1 vs. uniprot
Match: A0A7S2SM07_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SM07_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 4.040e-8
Identity = 27/83 (32.53%), Postives = 46/83 (55.42%), Query Frame = 0
Query:    2 KTANFFEISPPIDRDIFLGIVHEVLESSLLMFAPFGLPRGLRQAAGNEASFLRQYGPRFRLILEAVSEMVYSSRGVSESEMAV 84
            +   FF++ P +  + F+G+  EVLE++LL+FAPFG    L      +  F ++    F  +++AV+E  Y   G SE  +A+
Sbjct:   24 EREQFFQLPPSLSEETFVGLTREVLEATLLLFAPFGTA-ALFPGTDADPGFAQEVQEDFNRLMDAVAEACYRRHGFSEGTVAL 105          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig430.10985.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LRZ0_ECTSI1.350e-2561.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YUV6_9STRA4.170e-2457.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SM07_9STRA4.040e-832.53Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig430contigH-paniculata_contig430:5668..6715 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig430.10985.1mRNA_H-paniculata_contig430.10985.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig430 5391..6747 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig430.10985.1 ID=prot_H-paniculata_contig430.10985.1|Name=mRNA_H-paniculata_contig430.10985.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=89bp
MKTANFFEISPPIDRDIFLGIVHEVLESSLLMFAPFGLPRGLRQAAGNEA
SFLRQYGPRFRLILEAVSEMVYSSRGVSESEMAVTLHK*
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