prot_H-paniculata_contig42994.10982.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig42994.10982.1
Unique Nameprot_H-paniculata_contig42994.10982.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length153
Homology
BLAST of mRNA_H-paniculata_contig42994.10982.1 vs. uniprot
Match: A0A6H5KL99_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL99_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 6.560e-37
Identity = 71/152 (46.71%), Postives = 98/152 (64.47%), Query Frame = 0
Query:    2 YGLKQAGRMWSKRLVEVLVINVGMTQSKSDPCVFRLEKNGVVGMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWCLGCAFWRDIVSGVVRITQRTFVDTVVKPFDVETESNLLASQQVDLGSRRVDEDLSDKPVHSAVGSLIW 152
            YGLKQ+GR W     + LV N G  Q K+DPCVFR   + VV MI+ ++VDD++VAG    C+ L A+L  +F T   GE  WC GCA  RD+ +G ++I+Q  ++D++VKPFDV++ S + AS  VDLG +R DE   + PV  A GS+ W
Sbjct:  868 YGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECHWCDGCAIERDVEAGTLKISQTAYIDSMVKPFDVQSTSRIPASPGVDLGPKRDDEKGGEWPVREAKGSMTW 1018          
BLAST of mRNA_H-paniculata_contig42994.10982.1 vs. uniprot
Match: A0A6H5JLS1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLS1_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 1.560e-29
Identity = 64/143 (44.76%), Postives = 91/143 (63.64%), Query Frame = 0
Query:    2 YGLKQAGRMWSKRLVEVLVINVGMTQSKSDPCVFRLEKNGVVGMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWCLGCAFWRDIVSGVVRITQRTFVDTVVKPFDVETESNLLASQQVDLGSRRVDEDLSDKPV 143
            YGLKQ+GR W     + LV N G  Q K+DPCVFR   + VV MI+ ++VDD++VA     C+ L A+L+ +F T   GE +W   CA  RD+ +G ++I+Q T++D +VK FDV++ S + AS  VDLG +R DE   + PV
Sbjct:  311 YGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDMLVAESDEDCEELLASLKKKFPTKNLGECEWFHRCAIERDVEAGTLKISQTTYIDNMVKRFDVQSTSRIPASPGVDLGPKRDDEKGGEWPV 452          
BLAST of mRNA_H-paniculata_contig42994.10982.1 vs. uniprot
Match: A0A6H5KGA6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGA6_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 3.010e-21
Identity = 57/153 (37.25%), Postives = 85/153 (55.56%), Query Frame = 0
Query:    1 MYGLKQAGRMWSKRLVEVLVINVGMTQSKSDPCVFRLEKNGVVGMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWCLGCAFWRDIVSGVVRITQRTFVDTVVKPFDVETESNLLASQQVDLGSRRVDEDLSDKPVHSAVGSLIW 152
            +YGL+QA R++ KRLV  L   +G  QS SDPCV R      V  ++ +HVDD++  G       +  AL     T   GE+++ LGCAF RD  +G + ++Q +++ +V++ F+V   S++ AS   D  S   DE   D P    VGSL+W
Sbjct:   12 LYGLRQASRIFHKRLVSDLK-RIGFEQSLSDPCVLRFMMGDEVLGMIAIHVDDILYEGIERLAKMVVEALGDSLPTKNLGEIRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPASLTNDYKSVMEDEGARDVPFREVVGSLMW 163          
BLAST of mRNA_H-paniculata_contig42994.10982.1 vs. uniprot
Match: A0A6H5JCD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 6.960e-19
Identity = 54/153 (35.29%), Postives = 75/153 (49.02%), Query Frame = 0
Query:    1 MYGLKQAGRMWSKRLVEVLVINVGMTQSKSDPCVFRLEKNGVVGMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWCLGCAFWRDIVSGVVRITQRTFVDTVVKPFDVETESNLLASQQVDLGSRRVDEDLSDKPVHSAVGSLIW 152
            +YGLKQA R W K LV  +   +G  Q  +D CV RL + GVV M++ VHVDD+   GK  +C+     L      T  GEL+   G  F RD   G + ++Q+T+   +V  F V        +  V L      E   ++P  S VG L+W
Sbjct:  751 LYGLKQASRTWHKHLVRGMKC-LGFEQCAADACVMRLIEEGVVAMVVVVHVDDIFSIGKKSRCEQFGRDLNEYVPITNLGELRLYAGIRFSRDFAQGTITLSQQTYATNMVAKFGVTRNKETPMAVGVKLEEFDACEPDVEEPFRSLVGHLMW 902          
BLAST of mRNA_H-paniculata_contig42994.10982.1 vs. uniprot
Match: A0A0A9YFJ4_LYGHE (Copia protein (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9YFJ4_LYGHE)

HSP 1 Score: 84.7 bits (208), Expect = 2.340e-16
Identity = 55/160 (34.38%), Postives = 92/160 (57.50%), Query Frame = 0
Query:    1 MYGLKQAGRMWSKRLVEVLVINVGMTQSKSDPCVFRLEKNGVVGMILCVHVDDVIVAGKSV-KCDSLFAALRAEFQTT-RGELKWCLGCAFWRDIVSGVVRITQRTFVDTVVKPFDVETESNLLASQQVDL------GSRRVDEDLSDKPVHSAVGSLIW 152
            +YGLKQ+GR W  +L E L   +G+  SKSDPCV+ L+K     +IL ++VDD+ +A K++ K ++L A L+ E +    G + +CLG  F  +   GV+ I+QR +   ++K F +E+   L     V++       S+  +E  S+ P  + +GSL++
Sbjct:   58 LYGLKQSGRQWYLKLDEKLK-KLGLKPSKSDPCVYTLDKGTEDVVILTIYVDDLCLASKNLSKLNTLKAKLKEECKMKDMGRIHYCLGLEFKYEPEEGVMHISQRKYAQEILKRFKMESCKPLSTPLDVNVKFGEPENSQNSEE--SNLPYRNLIGSLMY 214          
BLAST of mRNA_H-paniculata_contig42994.10982.1 vs. uniprot
Match: A0A0A9WFE7_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9WFE7_LYGHE)

HSP 1 Score: 81.3 bits (199), Expect = 5.070e-15
Identity = 52/157 (33.12%), Postives = 87/157 (55.41%), Query Frame = 0
Query:    1 MYGLKQAGRMWSKRLVEVLVINVGMTQSKSDPCVFRLEKNGVVGMILCVHVDDVIVAGKSV-KCDSLFAALRAEFQTTR-GELKWCLGCAFWRDIVSGVVRITQRTFVDTVVKPFDVETESNLLASQQVDLG---SRRVDEDLSDKPVHSAVGSLIW 152
            +YGLKQ+G  W  +L   L   +GMT S+SDPCV+   K G   +IL V+VDD+I+  K   K   L   +  EF+    G++ +CLG  F  D   G ++I+QR +++ ++K F +ET + +     V++    +  +  ++   P  S +GSL++
Sbjct:  247 LYGLKQSGIQWYLKLDGRLKA-IGMTPSESDPCVYTRGK-GEGAVILAVYVDDIILTSKDPEKLKILKEKMMDEFRMKDLGKIHYCLGLEFDYDFEKGKLKISQRKYINEILKRFKMETANPISTPLDVNVKFEPTEAIPSEMDKYPFRSLIGSLMY 401          
BLAST of mRNA_H-paniculata_contig42994.10982.1 vs. uniprot
Match: A0A401H3M5_9APHY (Transposon Ty5-1 protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H3M5_9APHY)

HSP 1 Score: 78.6 bits (192), Expect = 2.320e-14
Identity = 50/161 (31.06%), Postives = 81/161 (50.31%), Query Frame = 0
Query:    2 YGLKQAGRMWSKRLVEVLVINVGMTQSKSDPCVFRL-EKNGVVGMILCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWCLGCAFWRDIVSGVVRITQRTFVDTVV--------KPFDVETESNLLASQQVDLGSRRVDEDLSDKPVHSAVGSLIW 152
            YGLKQ+GR W K++   L   +G+++S  D CVF L E N  + +I+ + VDD  +AG +         +   F+ T  GE+ W LG    RD  +  + ++QR ++D +V        KP     E   + S +    + R  ED+ + P   A+GSL++
Sbjct:   41 YGLKQSGRQWFKKISAALD-EMGLSRSLVDHCVFYLDEDNDSITLIIALSVDDTTIAGTNSAVLWFKTEISKHFEMTDLGEMHWILGIEVCRDRAARTLSLSQRAYIDGIVARFNLEDAKPLSTPLEPGAILSIRQCPSTPREFEDMRNVPYREAIGSLMY 200          
BLAST of mRNA_H-paniculata_contig42994.10982.1 vs. uniprot
Match: A0A165BJT7_EXIGL (Uncharacterized protein (Fragment) n=2 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165BJT7_EXIGL)

HSP 1 Score: 79.0 bits (193), Expect = 3.520e-14
Identity = 53/162 (32.72%), Postives = 83/162 (51.23%), Query Frame = 0
Query:    1 MYGLKQAGRMWSKRLVEVLVINVGMTQSKSDPCVFRLEKNGVVGMILCVHVDDVIVAGKSVKCDSLFAA-LRAEFQTTR-GELKWCLGCAFWRDIVSGVVRITQRTFVDTV--------VKPFDVETESNLLASQQVDLGSRRVDEDLSDKPVHSAVGSLIW 152
            +YGLKQ+GR W +RLVE+L   +  T+S+ D  VF     G   +I+ VHVDD  +A  +V+    F   +R   + T  GEL W LG    RD  +  + ++Q+++++++        VKP  +  + N   S      S      + DKP   AVGSL++
Sbjct:  829 LYGLKQSGRRWYQRLVEILCGKLAFTRSEVDQAVFFKVVRGGQLVIVVVHVDDCTIAASTVQLVREFKNDVRKHVEITDLGELHWLLGIEVRRDRDAKTLALSQKSYIESILRRYNLEDVKPVSIPMDPNTRLSSADAPSSASEYALMRDKPYAEAVGSLMY 990          
BLAST of mRNA_H-paniculata_contig42994.10982.1 vs. uniprot
Match: A0A146HMH3_MYCCL (Polyprotein (Fragment) n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146HMH3_MYCCL)

HSP 1 Score: 79.0 bits (193), Expect = 3.570e-14
Identity = 54/167 (32.34%), Postives = 89/167 (53.29%), Query Frame = 0
Query:    1 MYGLKQAGRMWSKRLVEVLVINVGMTQSKSDPCVFRLEKNGVVGMILCVHVDDVIVAGKSV-KCDSLFAALRAEFQTTR-GELKWCLGCAFWRDIVSGVVRITQRTFVDTVVKPFDV----------ETESNLLASQQVDLGSRRVDEDLS---DKPVHSAVGSLIW 152
            +YGLKQ+GR W +RLVE+    +G  + + D  VF   ++G V  ++ VHVDD  VA K + +  SL   +      +  GE+ W LG    RD  +  + ++QR ++D++++ + +          ET +NL +SQ     S     DL+   D P ++AVGSL++
Sbjct: 1116 LYGLKQSGRRWYQRLVEIFTA-MGFERCECDHGVFFQREDGAVVCVVVVHVDDCTVAAKRLERVQSLKKDMGTYVDVSDLGEIHWILGIEVKRDRAARTIHLSQRAYIDSILRRYGLDELKPVSTPMETSANLSSSQ-----SPSSTSDLALMRDVPYNAAVGSLMY 1276          
BLAST of mRNA_H-paniculata_contig42994.10982.1 vs. uniprot
Match: A0A0A9W1E1_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9W1E1_LYGHE)

HSP 1 Score: 78.6 bits (192), Expect = 4.580e-14
Identity = 52/161 (32.30%), Postives = 87/161 (54.04%), Query Frame = 0
Query:    2 YGLKQAGRMWSKRLVEVLVINVGMTQSKSDPCVFRLEKNGVVGMILCVHVDDVIVAGKSVKCDSLFAALRAEFQT-----TRGELKWCLGCAFWRDIVSGVVRITQRTFVDTVVKPFDVE--TESNLLASQQVDLGSRRVDEDLSDK---PVHSAVGSLIW 152
            YGLKQ+GR W+++L +VL  + GM QSK+DPC++  +KN    +I+ V VDD ++   S    SL  AL+   +T       G  + CLG    +D+ +G + I Q  +V+ ++  F+++    +       +D  +  V E  S+K   P   A+GSL++
Sbjct:  413 YGLKQSGRCWNRKLNQVLT-DFGMRQSKADPCIYIHDKNPNQVLIVAVWVDDFLIFTNS---KSLRQALKKRLETHFAMKDLGMARSCLGMRISQDLKNGKISIDQEEYVEKILARFNMKDCNPAPTPMDPGLDFTTVNVSESESEKLSVPYQEAIGSLLY 569          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42994.10982.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KL99_9PHAE6.560e-3746.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLS1_9PHAE1.560e-2944.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KGA6_9PHAE3.010e-2137.25Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JCD8_9PHAE6.960e-1935.29Integrase catalytic domain-containing protein n=1 ... [more]
A0A0A9YFJ4_LYGHE2.340e-1634.38Copia protein (Fragment) n=1 Tax=Lygus hesperus Ta... [more]
A0A0A9WFE7_LYGHE5.070e-1533.12Retrovirus-related Pol polyprotein from transposon... [more]
A0A401H3M5_9APHY2.320e-1431.06Transposon Ty5-1 protein n=1 Tax=Sparassis crispa ... [more]
A0A165BJT7_EXIGL3.520e-1432.72Uncharacterized protein (Fragment) n=2 Tax=Exidia ... [more]
A0A146HMH3_MYCCL3.570e-1432.34Polyprotein (Fragment) n=1 Tax=Mycena chlorophos T... [more]
A0A0A9W1E1_LYGHE4.580e-1432.30Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..117
e-value: 2.1E-11
score: 43.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig42994contigH-paniculata_contig42994:32..490 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig42994.10982.1mRNA_H-paniculata_contig42994.10982.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig42994 2..1042 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig42994.10982.1 ID=prot_H-paniculata_contig42994.10982.1|Name=mRNA_H-paniculata_contig42994.10982.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=153bp
MYGLKQAGRMWSKRLVEVLVINVGMTQSKSDPCVFRLEKNGVVGMILCVH
VDDVIVAGKSVKCDSLFAALRAEFQTTRGELKWCLGCAFWRDIVSGVVRI
TQRTFVDTVVKPFDVETESNLLASQQVDLGSRRVDEDLSDKPVHSAVGSL
IW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2