prot_H-paniculata_contig42960.10980.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig42960.10980.1
Unique Nameprot_H-paniculata_contig42960.10980.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length382
Homology
BLAST of mRNA_H-paniculata_contig42960.10980.1 vs. uniprot
Match: A0A401H123_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H123_9APHY)

HSP 1 Score: 127 bits (319), Expect = 2.860e-28
Identity = 70/195 (35.90%), Postives = 112/195 (57.44%), Query Frame = 0
Query:  187 EPKNHWEAQASPEWEHWQSAEEVEMQGLIDKGVWTKVERPKNKLVVSTMMIHKRKIGEDGKVEKCKFRLVAHRNRQIKGIHFQEASSSAPAATSTKMMLWLAAIEDWELRHVDVEQAYLQTPIDQEIFIKIPVKYRKFPGAVGCLDKAVYGLVQAGRCWSMKVTADLTEKGFEQSHAGPCVFRKVGDGEVFAVMI 381
            EP+ + EA + P+   W++A   E+   +   ++ KVERP+N+ V+    + K K G DG++EK K RLVA    Q++G+ F E  +      S + +L LAA  D E+  +DV+ A+L   +D+EI++K+P  +R+    +  L+KA+YGL QAGR W  K+ A+    GF + H+   VF K  DG +  + I
Sbjct:  602 EPQTYEEAMSRPDAARWKAACAEELHAFVKAELYDKVERPRNRKVIDCKWVFKIKRGLDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPSGFRRSNSLIWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDGILLIIAI 796          
BLAST of mRNA_H-paniculata_contig42960.10980.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 4.290e-28
Identity = 80/211 (37.91%), Postives = 119/211 (56.40%), Query Frame = 0
Query:  173 ALEMPEELRGDLPVEPKNHWEAQASPEWEHWQSAEEVEMQGLIDKGVWT-KVERPKNKLVVSTMMIHKRKIGEDGKVEKCKFRLVAHRNRQIKGIHFQEASSSAPAATSTKMMLWLAAIEDWELRHVDVEQAYLQTPIDQEIFIKIPVKYRKFPGAVGCLDKAVYGLVQAGRCWSMKVTADLTEKGFEQSHAGPCVFRKVGDGEVFAVMII 382
            A+E+P+EL  D+  EP ++ EA+ S     W  A   E++GLI  G +T  V+ P    V+    + K K  E GK+ K K RLVA   RQ  G+ + E  S    A S ++++ LA   D EL H D+EQA++Q+ +D E+F+K+P       G V  L+K++YGL QA R +  ++ +DL   GFEQS + PCV R +   EV  ++ I
Sbjct:  765 AVELPKELVQDVESEPGSYQEARQSKHAAIWDGAMSAEVEGLIRAGTFTLAVKIPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFRQKYGVDYLETFSPTANAASIRLLVALACKYDLELLHWDIEQAFVQSKLDHEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSDLKRIGFEQSLSDPCVLRFMMGDEVLGMVAI 975          
BLAST of mRNA_H-paniculata_contig42960.10980.1 vs. uniprot
Match: A0A6H5LDZ0_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDZ0_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 8.750e-28
Identity = 77/215 (35.81%), Postives = 121/215 (56.28%), Query Frame = 0
Query:  169 AMQVALEMPEELRGDLPVEPKNHWEAQASPEWEHWQSAEEVEMQGLIDKGVWTKVER-PKNKLVVSTMMIHKRKIGEDGKVEKCKFRLVAHRNRQIKGIHFQEASSSAPAATSTKMMLWLAAIEDWELRHVDVEQAYLQTPIDQEIFIKIPVKYRKFPGAVGCLDKAVYGLVQAGRCWSMKVTADLTEKGFEQSHAGPCVFRKVGDGEVFAVMII 382
            A + A+E+P+EL  D+  EP ++ EA  S     W  A   E++GLI  G +T   + P+   V+    + K K  E GK+ K K RLVA   +Q  G+ + E  S    A S ++++ LA   + EL H+D+EQA++Q+ +D E+F+K+P       G +  L+K++YGL QA R +  ++ +DL   GFEQS + PCV R +   EV  ++ I
Sbjct:  399 ASRDAVELPKELIQDVEPEPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFVQSKLDHEVFMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAI 613          
BLAST of mRNA_H-paniculata_contig42960.10980.1 vs. uniprot
Match: A0A6H5J594_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J594_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 9.020e-28
Identity = 77/215 (35.81%), Postives = 121/215 (56.28%), Query Frame = 0
Query:  169 AMQVALEMPEELRGDLPVEPKNHWEAQASPEWEHWQSAEEVEMQGLIDKGVWTKVER-PKNKLVVSTMMIHKRKIGEDGKVEKCKFRLVAHRNRQIKGIHFQEASSSAPAATSTKMMLWLAAIEDWELRHVDVEQAYLQTPIDQEIFIKIPVKYRKFPGAVGCLDKAVYGLVQAGRCWSMKVTADLTEKGFEQSHAGPCVFRKVGDGEVFAVMII 382
            A + A+E+P+EL  D+  EP ++ EA  S     W  A   E++GLI  G +T   + P+   V+    + K K  E GK+ K K RLVA   +Q  G+ + E  S    A S ++++ LA   + EL H+D+EQA++Q+ +D E+F+K+P       G +  L+K++YGL QA R +  ++ +DL   GFEQS + PCV R +   EV  ++ I
Sbjct:  463 AARDAVELPKELIQDVEPEPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFVQSKLDHEVFMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAI 677          
BLAST of mRNA_H-paniculata_contig42960.10980.1 vs. uniprot
Match: A0A6H5KHE8_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE8_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 1.220e-27
Identity = 76/211 (36.02%), Postives = 119/211 (56.40%), Query Frame = 0
Query:  173 ALEMPEELRGDLPVEPKNHWEAQASPEWEHWQSAEEVEMQGLIDKGVWTKVER-PKNKLVVSTMMIHKRKIGEDGKVEKCKFRLVAHRNRQIKGIHFQEASSSAPAATSTKMMLWLAAIEDWELRHVDVEQAYLQTPIDQEIFIKIPVKYRKFPGAVGCLDKAVYGLVQAGRCWSMKVTADLTEKGFEQSHAGPCVFRKVGDGEVFAVMII 382
            A+E+P+EL  D+  EP ++ EA  S     W  A   E++GLI  G +T   + P+   V+    + K K  E GK+ K K RLVA   +Q  G+ + E  S    A S ++++ LA   + EL H+D+EQA++Q+ +D E+F+K+P       G +  L+K++YGL QA R +  ++ +DL   GFEQS + PCV R +   EV  ++ I
Sbjct:  611 AVELPKELIQDVEPEPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFVQSKLDHEVFMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAI 821          
BLAST of mRNA_H-paniculata_contig42960.10980.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY)

HSP 1 Score: 125 bits (313), Expect = 1.920e-27
Identity = 69/195 (35.38%), Postives = 111/195 (56.92%), Query Frame = 0
Query:  187 EPKNHWEAQASPEWEHWQSAEEVEMQGLIDKGVWTKVERPKNKLVVSTMMIHKRKIGEDGKVEKCKFRLVAHRNRQIKGIHFQEASSSAPAATSTKMMLWLAAIEDWELRHVDVEQAYLQTPIDQEIFIKIPVKYRKFPGAVGCLDKAVYGLVQAGRCWSMKVTADLTEKGFEQSHAGPCVFRKVGDGEVFAVMI 381
            EP+ + EA + P+   W++A   E+   +   ++ +VERP+N+ V+    + K K G DG++EK K RLVA    Q++G+ F E  +      S + +L LAA  D E+  +DV+ A+L   +D+EI++K+P  + +    V  L+KA+YGL QAGR W  K+ A+    GF + H+   VF K  DG +  + I
Sbjct:  925 EPQTYEEAMSRPDAARWKAACAEELHAFVKAELYDEVERPRNRKVIDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPPGFHRSNSLVWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDGILLIIAI 1119          
BLAST of mRNA_H-paniculata_contig42960.10980.1 vs. uniprot
Match: A0A6H5JP36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP36_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 2.320e-26
Identity = 76/215 (35.35%), Postives = 120/215 (55.81%), Query Frame = 0
Query:  169 AMQVALEMPEELRGDLPVEPKNHWEAQASPEWEHWQSAEEVEMQGLIDKGVWTKVER-PKNKLVVSTMMIHKRKIGEDGKVEKCKFRLVAHRNRQIKGIHFQEASSSAPAATSTKMMLWLAAIEDWELRHVDVEQAYLQTPIDQEIFIKIPVKYRKFPGAVGCLDKAVYGLVQAGRCWSMKVTADLTEKGFEQSHAGPCVFRKVGDGEVFAVMII 382
            A + A+E+P+EL  D+  EP ++ EA  +     W  A   E++GLI  G +T   + P+   V+    + K K  E GK+ K K RLVA   +Q  G+ + E  S    A S ++++ LA   + EL H+D+EQA++Q+ +D E+F+K+P       G +  L+K+ YGL QA R +  ++ +DL   GFEQS + PCV R +   EV  ++ I
Sbjct:  127 AARDAVELPKELIQDVKPEPGSYQEALRAKHATIWDKAMCAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFVQSKLDHEVFMKLPPGCDSMSGKIVRLNKSWYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAI 341          
BLAST of mRNA_H-paniculata_contig42960.10980.1 vs. uniprot
Match: A0A061F8M9_THECC (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061F8M9_THECC)

HSP 1 Score: 120 bits (301), Expect = 3.930e-26
Identity = 65/187 (34.76%), Postives = 109/187 (58.29%), Query Frame = 0
Query:  202 HWQSAEEVEMQGLIDKGVWTKVERPKNKLVVSTMMIHKRKIGEDGKVEKCKFRLVAHRNRQIKGIHFQEASSSAPAATSTKMMLWLAAIEDWELRHVDVEQAYLQTPIDQEIFIKIPVKY---RKFPGA---VGCLDKAVYGLVQAGRCWSMKVTADLTEKGFEQSHAGPCVFR-KVGDGEVFAVMI 381
            HW+ A ++E++ L D G W+ V+ P N   V    ++K K+  DGKVE+ K RLVA    QI+G  +QE  S     T  +M   LAA ++W L  +D+  A+L   + +E+++++P  Y   R++P +   V  L K++YGL QA R W+ K+T  + + GF+QS++   +F  K  +G+  A+++
Sbjct:  171 HWKEAMDIELKALEDNGTWSIVQLPSNYHAVGCKWVYKVKLNADGKVERYKARLVAKGYNQIEGFDYQETFSPVARQTIVRMFFALAAAQNWRLSQLDINNAFLNGELTEEVYMELPQGYTFKREYPTSSRLVCKLHKSLYGLKQASRAWNSKLTTSVLKYGFKQSNSDYSLFTMKTHNGDFIALLV 357          
BLAST of mRNA_H-paniculata_contig42960.10980.1 vs. uniprot
Match: A0A8J6LFP5_TENMO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6LFP5_TENMO)

HSP 1 Score: 120 bits (300), Expect = 5.110e-26
Identity = 69/185 (37.30%), Postives = 104/185 (56.22%), Query Frame = 0
Query:  184 LPVEPKNHWEAQASPEWEHWQSAEEVEMQGLIDKGVWTKVERPKNKLVVSTMMIHKRKIGEDGKVEKCKFRLVAHRNRQIKGIHFQEASSSAPAATSTKMMLWLAAIEDWELRHVDVEQAYLQTPIDQEIFIKIPVKYRKFPGAVGCLDKAVYGLVQAGRCWSMKVTADLTEKGFEQSHAGPCVF 368
            L  EP++  EA +S   EHW+ A + E+Q L     WT VE PKN+  +    ++K K  EDG V+K K RLVA   RQ+ G+ + E  S      S +M+L +A  E   LR  DV+ A+L   ID+ ++++ P  Y+     V  L++++YGL QA RCW+ + T+ L+  G   ++A  CVF
Sbjct:  129 LNAEPESFEEATSSGNSEHWKQAMDEEIQSLKQNQTWTLVEPPKNQQFIDNRWVYKIKRNEDGSVQKYKARLVARGFRQVAGVDYNETFSPVTKFDSIRMILCVAVSEKLILRQFDVKTAFLYGNIDEILYMQQPDGYQDGTKRVCKLNRSLYGLKQASRCWNQRFTSVLSRLGLHPTNADVCVF 313          
BLAST of mRNA_H-paniculata_contig42960.10980.1 vs. uniprot
Match: A0A507FH27_9FUNG (DNA-directed DNA polymerase n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FH27_9FUNG)

HSP 1 Score: 119 bits (298), Expect = 1.690e-25
Identity = 65/188 (34.57%), Postives = 100/188 (53.19%), Query Frame = 0
Query:  188 PKNHWEAQASPEWEHWQSAEEVEMQGLIDKGVWTKVERPKNKLVVSTMMIHKRKIGEDGKVEKCKFRLVAHRNRQIKGIHFQEASSSAPAATSTKMMLWLAAIEDWELRHVDVEQAYLQTPIDQEIFIKIPVKYRKFPGAVGCLDKAVYGLVQAGRCWSMKVTADLTEKGFEQSHAGPCVFRKVGDGE 375
            P N  +A A P  +HW  AE  E+Q L     +T V R  +   ++   ++K K+ +DG +E+ + RLVA    Q  G  + E  S      + + +L LAA+ +W+ R  D   A+L   +D  I++  P  Y   P  +  L+KA+YGL QAGR W  ++T+ L  KG++QS A PCVF +  D +
Sbjct: 1034 PSNRKQAMAGPNKQHWLDAESYELQQLETNNTYTLVNRTASIKCITCRWVYKCKLNQDGSIERFRARLVARGFLQRHGYDYMETYSPVMRIATFRWLLALAALNNWQTRSADFSSAFLYGVLDTPIYMLPPDGYNADPTKIWLLNKAIYGLKQAGRVWFYRLTSYLKAKGYQQSRADPCVFFQHSDSD 1221          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42960.10980.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A401H123_9APHY2.860e-2835.90Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5JB16_9PHAE4.290e-2837.91Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5LDZ0_9PHAE8.750e-2835.81CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5J594_9PHAE9.020e-2835.81Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KHE8_9PHAE1.220e-2736.02CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A401G4V0_9APHY1.920e-2735.38Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5JP36_9PHAE2.320e-2635.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A061F8M9_THECC3.930e-2634.76Cysteine-rich RLK (RECEPTOR-like protein kinase) 8... [more]
A0A8J6LFP5_TENMO5.110e-2637.30Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A507FH27_9FUNG1.690e-2534.57DNA-directed DNA polymerase n=1 Tax=Chytriomyces c... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 219..377
e-value: 6.8E-29
score: 101.2
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 186..362
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 186..362

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig42960contigH-paniculata_contig42960:7..1200 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig42960.10980.1mRNA_H-paniculata_contig42960.10980.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig42960 7..1710 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig42960.10980.1 ID=prot_H-paniculata_contig42960.10980.1|Name=mRNA_H-paniculata_contig42960.10980.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=382bp
MRKIIPKHKMVPRGEECIMLGISHNHPSGTVRVFNVKTGHIVERQNISWH
PESPENQEGGGLAVETRRGDDKTIDRSPRLGSSGQPLQPEENEEERQQEE
KQDRPDLALRQLTDDFTEQQPSVFSTGTRSGRSANRGDGGGAALQSVLTD
DIDLDEEEFMAYHEVNILAMQVALEMPEELRGDLPVEPKNHWEAQASPEW
EHWQSAEEVEMQGLIDKGVWTKVERPKNKLVVSTMMIHKRKIGEDGKVEK
CKFRLVAHRNRQIKGIHFQEASSSAPAATSTKMMLWLAAIEDWELRHVDV
EQAYLQTPIDQEIFIKIPVKYRKFPGAVGCLDKAVYGLVQAGRCWSMKVT
ADLTEKGFEQSHAGPCVFRKVGDGEVFAVMII
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like