mRNA_H-paniculata_contig42960.10980.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig42960.10980.1
Unique NamemRNA_H-paniculata_contig42960.10980.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig42960.10980.1 vs. uniprot
Match: A0A6H5J594_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J594_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 5.370e-53
Identity = 177/570 (31.05%), Postives = 273/570 (47.89%), Query Frame = 1
Query:    1 LGGPMRVTSLGGSSYVMIIVDDYSRFQAVKFIKKKSHATAALQSYIAEHTT---PKGLRIGNIRTDSGG--FDGDFHLKMDEHGINHELTPPNTPQYNGVAERRLGLL-------RVKTIALMQDQTEGGSERLWAEAVNYACDITNMSCTSSIEGNVISYEKCYGTTAPLEYL*TFRTVGYMRKIIPKHKMVPRGEECIMLGISHNHPSGTVRVFNVKTGHIVERQNISWHP---ESPENQEGGGLAVETRRGD--DKTIDRSPRLGSSGQPLQPEENXXXXXXXXXQDRPDLALRQLTDDFTEQQPSVFSTGTRSGRSANRGDGGGAALQSVLTDDIDLDEEEFMAYHEVNILAMQVALEMPEELRGDLPVEPKNHWEAQASPEWEHWQSAEEVEMQGLIDKGVWTKVER-PKNKLVVSTMMIHKRKIGEDGKVEKCKFRLVAHRNRQIKGIHFQEASSSAPAATSTKMMLWLAAIEDWELRHVDVEQAYLQTPIDQEIFIKIPVKYRKFPGAVGCLDKAVYGLVQAGRCWSMKVTADLTEKGFEQSHAGPCVFRKVGDGEVFAVMII 1656
            LGG   V S+GG  Y MI+ DD++R   + F++ KS A +A +S+ A       P  + I  +R+D+GG  F G+F    +E  I  E TP ++P++NGVAER LGL        R++   L        ++RLWAEA+++AC+  N +  S+   +   YE  YG   P      F    Y +   P  K++P+GE C  +G S +HP    RV   + G I E +N++W     + P  Q    + V    G+  D  ++                 XXXXXXXXX    + ++                    +   A R        Q V+      D  +F         A + A+E+P+EL  D+  EP ++ EA  S     W  A   E++GLI  G +T   + P+   V+    + K K  E GK+ K K RLVA   +Q  G+ + E  S    A S ++++ LA   + EL H+D+EQA++Q+ +D E+F+K+P       G +  L+K++YGL QA R +  ++ +DL   GFEQS + PCV R +   EV  ++ I
Sbjct:  132 LGGKKGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFHANVRADGIPSLIEI--VRSDNGGGFFGGEFASVCNELVIKQEFTPAHSPEFNGVAERGLGLTEEAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPARPY-PFLKPAYCKWQRPS-KLLPKGESCFYVGPSRDHPRDCHRVLT-RAGTIQETRNVTWEALPSQLPPPQPPLPIEVAEEEGEESDDDVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEESMDXXXXXXXXXXXXXXXVEVEASPPAAR------RPQHVV------DLADFNT-------AARDAVELPKELIQDVEPEPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFVQSKLDHEVFMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAI 677          
BLAST of mRNA_H-paniculata_contig42960.10980.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 2.230e-51
Identity = 198/657 (30.14%), Postives = 288/657 (43.84%), Query Frame = 1
Query:    1 LGGPMRVTSLGGSSYVMIIVDDYSRFQAVKFIKKKSHATAALQSYIAEHTTPKGLR--IGNIRTDSGG--FDGDFHLKMDEHGINHELTPPNTPQYNGVAERRLGLL-------RVKTIALMQDQTEGGSERLWAEAVNYACDITNMSCTSSIEGNVISYEKCYGTTAPLEYL*TFRTVGYMRKIIPKHKMVPRGEECIMLGISHNHPSGTVRVFNVKTGHIVERQNISWH--------PESP---ENQEGGGLA----VETR------RGDDKTIDR----------------SPRLGSSGQPLQPEENXXXXXXXXXQDRPDLALR------------------QLTDDF--------TEQQPSV------------FSTGTRSGRSANRG--------------DGGGAALQSVLTDDIDLDEEEFMAYHEVNILAMQV----ALEMPEELRGDLPVEPKNHWEAQASPEWEHWQSAEEVEMQGLIDKGVWT-KVERPKNKLVVSTMMIHKRKIGEDGKVEKCKFRLVAHRNRQIKGIHFQEASSSAPAATSTKMMLWLAAIEDWELRHVDVEQAYLQTPIDQEIFIKIPVKYRKFPGAVGCLDKAVYGLVQAGRCWSMKVTADLTEKGFEQSHAGPCVFRKVGDGEVFAVMII 1656
            LGG   V S+GG  Y MI+ DD++R   + F++ KS A +A +S++A      G+   +  +R+D+GG  F G+F    +E  I  E TP ++PQYNGVAER LGL+       R++   L        +++LWAEA+++AC+  N +  S+   +   YE  YG   P      F    Y +   P  K+ P+GE C  +G S +HP    RV   + G I E ++++W         P+ P   E  E GG      VET       RG   T+ R                S   GS G+   P   XXXX        P+                      Q TD           E  P V            F+   R       G               G  A L  V   +I            +N L  +     A+E+P+EL  D+  EP ++ EA+ S     W  A   E++GLI  G +T  V+ P    V+    + K K  E GK+ K K RLVA   RQ  G+ + E  S    A S ++++ LA   D EL H D+EQA++Q+ +D E+F+K+P       G V  L+K++YGL QA R +  ++ +DL   GFEQS + PCV R +   EV  ++ I
Sbjct:  335 LGGKKAVVSVGGKYYPMIVKDDFTRRAWIYFLRNKSDAASAFRSFLAS-VRADGIPSLVETVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPARPY-PFLKPAYCKWQRPS-KLFPKGESCFYVGPSRDHPRDCHRVLT-RAGTIQETRDVTWEALPSQLPPPQPPLPIEIAEEGGEESDNDVETEVWPLVGRGVAHTLLRNNAAVVPSGEAIDVVESVDAGSVGRSPSPXXXXXXXVPSVSSPAPEFTDGDGQGGQDVGEIESMGPGDQETDPVXXXXXEVEAEASPPVARRPRHVAELADFNNPARENDEVREGRTRAQTRAVNQQSVPGLVATLGPVFATEI------------INSLLAEQRAGDAVELPKELVQDVESEPGSYQEARQSKHAAIWDGAMSAEVEGLIRAGTFTLAVKIPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFRQKYGVDYLETFSPTANAASIRLLVALACKYDLELLHWDIEQAFVQSKLDHEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSDLKRIGFEQSLSDPCVLRFMMGDEVLGMVAI 975          
BLAST of mRNA_H-paniculata_contig42960.10980.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 7.070e-47
Identity = 183/664 (27.56%), Postives = 289/664 (43.52%), Query Frame = 1
Query:    1 LGGPMRVTSLGGSSYVMIIVDDYSRFQAVKFIKKKSHATAALQSYIAE---HTTPKGLRIGNIRTDSGG--FDGDFHLKMDEHGINHELTPPNTPQYNGVAERRLGLL-------RVKTIALMQDQTEGGSERLWAEAVNYACDITNMSCTSSIEGNVISYEKCYGTTAPLEYL*TFRTVGYMRKIIPKHKMVPRGEECIMLGISHNHPSGTVRVFNVKTGHIVERQNISWH----------PESPEN--QEGGGLA---VETR------RGDDKTIDRSPRLGSSGQPLQPEE------NXXXXXXXXXQDRPDLALRQLTDDFTEQQPSVFSTGTRSGRSAN----RGDGGG---------------------------------------AALQSVLTDDIDLDE-------EEFMAYHEVNILAMQVAL----------------------EMPEELRGDLPVEPKNHWEAQASPEWEHWQSAEEVEMQGLIDKGVWTKVER-PKNKLVVSTMMIHKRKIGEDGKVEKCKFRLVAHRNRQIKGIHFQEASSSAPAATSTKMMLWLAAIEDWELRHVDVEQAYLQTPIDQEIFIKIPVKYRKFPGAVGCLDKAVYGLVQAGRCWSMKVTADLTEKGFEQSHAGPCVFRKVGDGEVFAVMII 1656
            LGG   + S+GG  Y MI+ DD++R   + F++ KS A +A ++++A    +  P  + I  +R+D+GG  F G+F    +E  I  E TP  +PQYNGVAER LGL+       R++   L        +++LWAEA+++AC+  N +  S+   ++  YE  YG   P      F    Y R   P  K++P+GE C  +G S +HP    RV   + G I E ++++W           P  P    +EGG  +   VET       RG   T+ +   + S  +  + E                  +   LA        +   P   + G   G   +     GD GG                                       A L    T   + DE        +  A ++ ++  +  +L                      E+P+EL  D+   P ++ EAQ S   + W+ A   E++GLI  G +T   + P    V+    + K K  E GK+ K K RLVA   +Q  G+ + E  S    A S ++++ LA   + EL H D+EQA++Q+ +D E+F+K+P       G V  L+K++YGL QA R +  ++ ++L   GFEQS + PCV R +   EV  ++ I
Sbjct:  252 LGGRKDIASVGGKHYPMIVKDDFTRRTWICFLRNKSDAGSAFRTFLASVRANGVPSFVEI--VRSDNGGEFFGGEFTSVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGEPRPARPY-PFLKPAYCRWQRPT-KLLPKGESCFYVGPSRDHPRDCHRVLT-RAGTIQETRDVTWEVLQSQLPPLQPSLPIEVAEEGGEDSDDNVETEVWPLVGRGVAHTLLKRDAVPSGARVEEVESVGAGSVGPSFSVPSSPAEPSSLANNSFDSVASVSSPMPVNDGEGQGGQESGELEMGDPGGDDEEESMEQXXXXXXXXXXXXXPVEAEAPPPAARRPRHVAELADFNTASRENDEVREGRTRAQTRAVNQQSVPGLVASLGPISATELVYTLMSEQRAGDETELPKELVQDVESVPDSYQEAQRSKYAKIWEGAMSAEVEGLIRAGTFTLAAKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAI 910          
BLAST of mRNA_H-paniculata_contig42960.10980.1 vs. uniprot
Match: UPI00202469D1 (DDE-type integrase/transposase/recombinase n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=UPI00202469D1)

HSP 1 Score: 176 bits (447), Expect = 1.780e-43
Identity = 151/566 (26.68%), Postives = 253/566 (44.70%), Query Frame = 1
Query:    7 GPMRVTSLGGSSYVMIIVDDYSRFQAVKFIKKKSHATAALQSYIAEHTTPKGLRIGNIRTDSGG--FDGDFHLKMDEHGINHELTPPNTPQYNGVAERRLGLLRVKTIALMQDQTEGGSERLWAEAVNYACDITNMSCTSSIEGNVISYEKCYGTTAPLEYL*TFRTVGYMRKIIPKHKMVPRGEECIMLGISHNHPSGTV----------RVFNVKTGHIVERQNISWHPESPENQEGGGLAVETRRGDDKTIDRSPRLGSSGQPLQPEENXXXXXXXXXQDRPDLALRQLTDDFTEQQPSVFSTGTRSGRSANRGDG-GGAALQSVLTDDIDLDEEEFMAYHEVNILAMQVALEMPEELRGDLPVEPKNHWEAQASPEWEHWQSAEEVEMQGLIDKGVWTKVERPKNKLVVSTMMIHKRKIGEDGKVEKCKFRLVAHRNRQIKGIHFQEASSSAPAATSTKMMLWLAAIEDWELRHVDVEQAYLQTPIDQEIFIKIPVKY--RKFPGAVGCLDKAVYGLVQAGRCWSMKVTADLTEKGFEQSHAGPCVFRKV-GDGEVFAVMII 1656
            GPM V + GG  YV+ + DD SR+  V  +K KS      + +  E    +  +I  +R+D GG     +F   + + GI  +LTPP TPQ NGV+ERR   L +  +  M   T+      W  A+  A    N + + S+E     YE  +G    L +L  +    Y++K+ P+ K+ P+ E+C+ +G    +P  T+          ++F  K G  +E++ +S        +E  G  VE     D+ +   P  G++      +EN            P     ++ DD  E    V +   RS R+ +  +  G   L+ +L D+                                   EP N+ EA A P+ + W  A + E+  + +  VWT  + P ++  +    I K+K   DG V   K RLVA   RQ++G+ + E  S      S ++ML +AA  D+E+  +DV+ A+L   + +E+++  P  +   K    V  L +++YGLVQA R W+++    +   GF Q++   CV++KV G    F ++ +
Sbjct:  176 GPMSVEARGGYRYVLTLTDDLSRYGYVYLMKHKSETFEKFKEFQNEVENQRDRKIKFLRSDRGGEYLSHEFGTHLRKCGIVSQLTPPGTPQRNGVSERRNRTL-LDMVRSMMSLTDLPLS-FWGYALETATFTLNRAPSKSVE--TTPYELWFGKKPKLSFLKVWGCDAYVKKLQPE-KLEPKSEKCVFIG----YPKETIGYTFYLRSEGKIFVAKNGSFLEKEFLS--------KEVSGRKVEL----DEVLPLEPENGAT------QENVPEV--------PAPTREEVNDDDHETSDQVATELRRSTRTRSAPEWYGNPVLEIMLLDN----------------------------------GEPSNYEEAMAGPDSDKWLEAMKSEIGSMYENEVWTLTDLPDDRRAIENKWIFKKKTDADGNVTIYKARLVAKGYRQVQGVDYDETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLKEELYMMQPEGFVDPKNADKVCKLQRSIYGLVQASRSWNIRFDEMIKAFGFTQTYGEACVYKKVSGSSVAFLILYV 672          
BLAST of mRNA_H-paniculata_contig42960.10980.1 vs. uniprot
Match: A0A6H5K622_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K622_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 4.010e-43
Identity = 159/525 (30.29%), Postives = 249/525 (47.43%), Query Frame = 1
Query:    1 LGGPMRVTSLGGSSYVMIIVDDYSRFQAVKFIKKKSHATAALQSYIAEHTT---PKGLRIGNIRTDSGG--FDGDFHLKMDEHGINHELTPPNTPQYNGVAERRLGLL-------RVKTIALMQDQTEGGSERLWAEAVNYACDITNMSCTSSIEGNVISYEKCYGTTAPLEYL*TFRTVGYMRKIIPKHKMVPRGEECIMLGISHNHPSGTVRVFNVKTGHIVERQNISWHP---ESPENQEGGGLAVETRRGD--DKTIDRSPRLGSSGQPLQPEENXXXXXXXXXQDRPDLALRQLTDDFTEQQPSVFSTGTRSGRSANRGDGGGAALQSVLTDDIDLDEEEFMAYHEVNILAMQVALEMPEELRGDLPVEPKNHWEAQASPEWEHWQSAEEVEMQGLIDKGVWTKVER-PKNKLVVSTMMIHKRKIGEDGKVEKCKFRLVAHRNRQIKGIHFQEASSSAPAATSTKMMLWLAAIEDWELRHVDVEQAYLQTPIDQEIFIKIPVKYRKFPGAVGCLDKAVYG 1521
            LGG   V S+GG  Y MI+ DD++R   + F++ KS A +A +S++A       P  + I  +R+D+GG  F G+F    +E  I  E TP ++P++NGVAER LGL+       R++   L        ++RLWAEA+++AC+  N +  S+   +   YE  YG   P      F    Y +   P  K++P+GE C  +G S +HP    RV   + G I E +N++W     + P  Q    + V    G+  D  ++                 XXXXXXXXX    + ++                    +   A R        Q V+      D  +F         A + A+E+P+EL  D+  EP ++ EA  S     W  A   E++GLI  G +T   + P+   V+    + K K  E GK+ K K RLVA   +Q  G+ + E  S    A S ++++ LA   + EL H+D+EQA++Q+ +D E+F+K+P       G +  L+K++YG
Sbjct:  482 LGGKKGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFLANVRADGIPSLIEI--VRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPEFNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPARPY-PFLKPAYCKWQRPS-KLLPKGESCFYVGPSRDHPRDCHRVLT-RAGTIQETRNVTWEALPSQLPPPQPPLPIEVAEEEGEESDDDVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEESMDXXXXXXXXXXXXXXXVEVEASPPAAR------RPQHVV------DLADFNT-------AARDAVELPKELIQDVEPEPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFVQSKLDHEVFMKLPPGCDSMSGKIVRLNKSLYG 982          
BLAST of mRNA_H-paniculata_contig42960.10980.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 7.670e-43
Identity = 188/659 (28.53%), Postives = 287/659 (43.55%), Query Frame = 1
Query:    1 LGGPMRVTSLGGSSYVMIIVDDYSRFQAVKFIKKKSHATAALQSYIAE---HTTPKGLRIGNIRTDSGG--FDGDFHLKMDEHGINHELTPPNTPQYNGVAERRLGLL-------RVKTIALMQDQTEGGSERLWAEAVNYACDITNMSCTSSIEGNVISYEKCYGTTAPLEYL*TFRTVGYMRKIIPKHKMVPRGEECIMLGISHNHPSGTVRVFNVKTGHIVERQNISWHPESPENQE-----------------------------GGGLA-----------------VETRRGDDKT--------------------------IDRSPRLGSSGQPLQPEENXXXXXXXXXQDRPDLALRQLTDDFTEQQPSVFSTGTRSGRSANRGDGGGAALQSVLTDDIDLDEEEFMAYHEVNILAMQVAL----------------------EMPEELRGDLPVEPKNHWEAQASPEWEHWQSAEEVEMQGLIDKGVWT-KVERPKNKLVVSTMMIHKRKIGEDGKVEKCKFRLVAHRNRQIKGIHFQEASSSAPAATSTKMMLWLAAIEDWELRHVDVEQAYLQTPIDQEIFIKIPVKYRKFPGAVGCLDKAVYGLVQAGRCWSMKVTADLTEKGFEQSHAGPCVFRKVGDGEVFAVMII 1656
            LGG   V S+GG  Y MI+ DD++R   + F+K KS A  A +S++A       P  + I  +R+D+GG  F G+F    +E  I  E TP  +PQYNGVAER LGL+       R++   L        +++LWAEA+++AC+  N +  S+   +   YE  YG   P      F    Y R   P  K++P+GE C  +G S +HP    RV   + G I E ++++W     +                                G G+A                 VE+                                 ID +     +G P   +E XXXXXXXXX        R +    TE  P    TG R    A   D   AA ++    +      +  A ++ ++  +   +                      E+P+EL  D+  EP ++ EAQ S   + W+ A   E++GL+  G +T  V+ P    V+    + K K  E GK+ K K RLVA   +Q  G+ + E  S    A S ++++ LA   + EL H D+EQA++Q+ +D E+F+K+P         V  L+K++YGL QA R +  ++ ++L   GFEQS + PCV R +   EV  ++ I
Sbjct:  438 LGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEI--VRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGEPRPARPY-PFLKPAYCRWQRPS-KLLPKGESCFYVGPSRDHPRDCHRVLT-RAGTIQETRDVTWEVLPSQLXXXXXXXXXXXXXXXXXXXXXXXXXEVWPLVGRGVAHTLLKREAVPPGTEVVEVESXXXXXXXXXXXXXXXXXXXXXXXXXSVSSPVPEIDVNSGEIETGDPGGDDEXXXXXXXXXXXXXXXXXXRPVE---TEASPP---TGRRPRHVAELADFNTAARENDEVRE-GRTRAQTRAVNQQSVPGLMATIGPISGTEVLYALLSEQRAGDETELPKELVQDVESEPGSYEEAQRSKYAKIWEGARSAEVEGLMRAGTFTLAVKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASFRLVVALACKYNLELLHWDIEQAFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAI 1084          
BLAST of mRNA_H-paniculata_contig42960.10980.1 vs. uniprot
Match: A0A6S7HNY1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HNY1_PARCT)

HSP 1 Score: 173 bits (438), Expect = 3.310e-42
Identity = 152/552 (27.54%), Postives = 247/552 (44.75%), Query Frame = 1
Query:    7 GPMRVTSLGGSSYVMIIVDDYSRFQAVKFIKKKSHATAALQSYIAEHTTPKGLRIGNIRTDSGG--FDGDFHLKMDEHGINHELTPPNTPQYNGVAERRLGLLRVKTIALMQDQTEGGSE-RLWAEAVNYACDITNMSCTSSIEGNVISYEKCYGTTAPLEYL*TFRTVGYMRKIIP---KHKMVPRGEECIMLGISHNHPSGT--VRVFNVKTGHIVERQNISWHPESPENQEGGGLAVETRRGDDKTIDRSPRLGSSGQPLQPEENXXXXXXXXXQDRPDLALRQLTDDFTEQQPSVFSTGT----RSGRSANRGDGGGAALQSVLTDDIDLDEEEFMAYHEVNILAMQVALEMPEELRGDLPVEPKNHWEAQASPEWEHWQSAEEVEMQGLIDKGVWTKVERPKNKLVVSTMMIHKRKIGEDGKVEKCKFRLVAHRNRQIKGIHFQEASSSAPAATSTKMMLWLAAIEDWELRHVDVEQAYLQTPIDQEIFIKIPVKY--RKFPGAVGCLDKAVYGLVQAGRCWSMKVTADLTEKGFEQSHAGPCVFRK 1620
            GPM V S+GGS Y +  +DDY+R+  V FIK K    A  + ++   T   G  +  +RTD+GG     +F   + E GI H+LT P  P  NGV+ER    L   T ++M   + G +    WAEA+N A  + N S T+S++  +  YE  +     +  L  F    +    IP   + K   +  + + +G    +P GT   ++++  T   +  ++I +      + + G              D  P++     P    E           +R ++ ++ +    T ++  +  TG     R  R+ +R D      +  + D++  D  E                          PV  +  W    S EW+    A + E + L+    W  V  PK K +V +  + K K   DG VE+ K RLVA    Q +GI +QE  S     TS + +L +A I DWE+  +DV+ A+LQ  +D+ IF+K P  Y  ++ P  V  L++++YGL QA RCW+  +   L   G+ +S+A PC++ K
Sbjct:  493 GPMSVNSIGGSRYFVTFIDDYTRYTYVYFIKHKDEVLAKFKEFVNLATNLTGKSVKTLRTDNGGEYCSKEFESFLKEKGIVHQLTVPYNPAQNGVSERMNRTLVESTRSMM---SHGKTPVEFWAEAINTAVYLRNRSPTTSLK-EITPYECLFKQKPDVSNLRVFGCEAFAH--IPEKQRKKFDEKSRKAVFIG----YPEGTKGYKLYDPSTRKFIRSRDIVFVEGKFHDFKDGCSGKTCTDFYIPVDDVIPQVEIQDVPAVVIEGDHNELVDEENEREEVHVQPVG--ATYEENFMRETGNLGDKRQRRAPSRFDD-----KCYVADNLTADINE--------------------------PVHIQEAWTGDHSVEWKE---ATDSEYESLMKNDTWELVPPPKGKNIVGSRWVFKVKHTADGSVERFKARLVAQGYSQSQGIDYQEIFSPVVRYTSIRSLLAVANICDWEISQMDVKTAFLQGELDEVIFMKQPEGYVDQERPDHVCKLNRSIYGLKQAARCWNSAIDTFLISNGYTKSNADPCIYIK 998          
BLAST of mRNA_H-paniculata_contig42960.10980.1 vs. uniprot
Match: A0A075B3L7_ROZAC (Integrase, catalytic core domain-containing protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075B3L7_ROZAC)

HSP 1 Score: 172 bits (436), Expect = 4.330e-42
Identity = 152/564 (26.95%), Postives = 245/564 (43.44%), Query Frame = 1
Query:    1 LGGPMRVTSLGGSSYVMIIVDDYSRFQAVKFIKKKSHATAALQSYIAEHTTPKGLRIGNIRTDSGG--FDGDFHLKMDEHGINHELTPPNTPQYNGVAERRLGLLRVKTIALMQDQTEGGSERLWAEAVNYACDITNMSCTSSIEGNVISYEKCYGTTAPLEYL*TFRTVG-----YMRKIIPKHKMVPRGEECIMLGISHNHPSGTVRVFNVKTGHIVERQNISWHPESPENQEGGGLAVETRRGDD---KTIDRSPRLGSSGQPLQPEENXXXXXXXXXQDRPDLALRQLTDDFTEQQPSVFSTGTRSGRSANRGDGGGAALQSVLTDDIDLDEEEFMAYHEVNILAMQVALEMPEELRGDLPVE-PKNHWEAQASPEWEHWQSAEEVEMQGLIDKGVWTKVERPKNKLVVSTMMIHKRKIGEDGKVEKCKFRLVAHRNRQIKGIHFQEASSSAPAATSTKMMLWLAAIEDWELRHVDVEQAYLQTPIDQEIFIKIPVKYRK--FPGAVGCLDKAVYGLVQAGRCWSMKVTADLTEKGFEQSHAGPCVFRKVGDGEVFAVMI 1653
            L GPM+V +  G  YV +++DD+SR   ++ ++ K+ A   L+  I    T  G ++  +R+D GG   DGD      E GI H LT   TP+ NG AER+ GLL      L++    G  +  W E VN AC + N + TS I GN+   E   G    + +L   RT+G     Y+ KI  + K+  + EE  ++G   +  +  +RV   KT  ++    +S H +    Q+       T   DD     ID   ++                                  DF E+   +         + N  +      + +     +L   E   Y E++     VAL     L  D   E P+N  EA +  E   W+ A E E + L +   W   E P ++  V    +  +K   +GK+++ K RLVA    Q  GI  ++  +      S ++++ L    DW +  +D+  AYL   +D  I++K P  + K      V  L K++YGL Q+GR W++K+  DL + GF++  A  C++ K  +G +  + I
Sbjct:   48 LCGPMQVETPSGKRYVHVVIDDFSRMCWIRLLRNKAEAKVTLREIITFIETQSGRKVKTVRSDRGGEFVDGDLQKYFTEKGIKHYLTDKYTPEMNGTAERKNGLLMAAARCLLRQA--GLPDTFWGEMVNTACYLQNRTPTS-ILGNITPVEAFTGEKPSVAHL---RTIGTKCFVYIPKI-KRQKLDEQAEEHTLVGYDISERNYRLRVG--KTNRVI----VSTHVKFTNIQQELNKMKYTNLEDDLLDNEIDEEIKMNQE------------------------TSTNKQYDFKEELNKLLINSNIQKHNKNNEENTNVEKEPIQPRPRNLRNLERKDYAELSNFK-DVAL-----LSTDRISEIPRNVKEALSGAEANEWKQAMETEYKSLEENKTWKLCELPASRTAVGCRWVFAKKFDSEGKLQRYKARLVAQGFSQRPGIDVEQTYAPVTRIQSVRILIALGVQLDWHMHQMDMVTAYLNGTLDTMIYMKQPEGFIKEGSENLVCDLQKSLYGLKQSGRLWNIKIDCDLRKNGFKRCRADWCIYVKQENGVIIVIAI 568          
BLAST of mRNA_H-paniculata_contig42960.10980.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 4.490e-42
Identity = 176/648 (27.16%), Postives = 281/648 (43.36%), Query Frame = 1
Query:   49 MIIVDDYSRFQAVKFIKKKSHATAALQSYIAE---HTTPKGLRIGNIRTDSGG--FDGDFHLKMDEHGINHELTPPNTPQYNGVAERRLGLL-------RVKTIALMQDQTEGGSERLWAEAVNYACDITNMSCTSSIEGNVISYEKCYGTTAPLEYL*TFRTVGYMRKIIPKHKMVPRGEECIMLGISHNHPSGTVRVFNVKTGHIVERQNISWH----------PESPEN--QEGGGLA---VETR------RGDDKTIDRSPRLGSSGQPLQPEE------NXXXXXXXXXQDRPDLALRQLTDDFTEQQPSVFSTGTRSGRSAN----RGDGGG---------------------------------------AALQSVLTDDIDLDE-------EEFMAYHEVNILAMQVAL----------------------EMPEELRGDLPVEPKNHWEAQASPEWEHWQSAEEVEMQGLIDKGVWTKVER-PKNKLVVSTMMIHKRKIGEDGKVEKCKFRLVAHRNRQIKGIHFQEASSSAPAATSTKMMLWLAAIEDWELRHVDVEQAYLQTPIDQEIFIKIPVKYRKFPGAVGCLDKAVYGLVQAGRCWSMKVTADLTEKGFEQSHAGPCVFRKVGDGEVFAVMII 1656
            MI+ DD++R   + F++ KS A +A ++++A    +  P  + I  +R+D+GG  F G+F    +E  I  E TP  +PQYNGVAER LGL+       R++   L        +++LWAEA+++AC+  N +  S+   ++  YE  YG   P      F    Y R   P  K++P+GE C  +G S +HP    RV   + G I E ++++W           P  P    +EGG  +   VET       RG   T+ +   + S  +  + E                  +   LA        +   P   + G   G   +     GD GG                                       A L    T   + DE        +  A ++ ++  +  +L                      E+P+EL  D+   P ++ EAQ S   + W+ A   E++GLI  G +T   + P +  V+    + K K  E GK+ K K RLVA   +Q  G+ + E  S    A S ++++ LA   + EL H D+EQA++Q+ +D E+F+K+P       G V  L+K++YGL QA R +  ++ ++L   GFEQS + PCV R +   EV  ++ I
Sbjct:    1 MIVKDDFTRRIWMYFLRNKSDAGSAFRTFLASVRANGVPSFVEI--VRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGEPRPARPY-PFLKPAYCRWQRPT-KLLPKGESCFYVGPSRDHPRDCHRVLT-RAGTIQETRDVTWEVLQSQLPPLQPSLPIEVAEEGGEDSDDNVETEVWPLVGRGVAHTLLKRDAVPSGARVEEVESVGAGSVGPSFSVPSSPAEPSSLANNSFDSVASVSSPMPVNDGEGQGGQESGELEMGDPGGDDEEESMEQXXXXXXXXXXXXXPVEAEAPPPAARRPRHVAELADFNTASRENDEVREGRTRAQTRAVNQQSVPGLVASLGPISATELVYTLMSEQRAGDETELPKELVQDVESVPDSYQEAQRSKYAKIWEGAMSAEVEGLIRAGTFTLAAKVPISCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAI 643          
BLAST of mRNA_H-paniculata_contig42960.10980.1 vs. uniprot
Match: A0A1J3ITQ9_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3ITQ9_NOCCA)

HSP 1 Score: 171 bits (433), Expect = 1.480e-41
Identity = 162/561 (28.88%), Postives = 251/561 (44.74%), Query Frame = 1
Query:    1 LGGPMRVTSLGGSSYVMIIVDDYSRFQAVKFIKKKSHATAALQSYIAEHTTPKGLRIGNIRTDSGG-FDGDFHLKM-DEHGINHELTPPNTPQYNGVAERRLGLLRVKTIALMQDQTEGGS--ERLWAEAVNYACDITNMSCTSSIEGNVISYEKCYGTTAPLEYL*TFRTVGYMRKIIPKH----KMVPRGEECIMLGISHNHPSGTVRVFNVKTGHIVERQNISWHPESPENQEGGGLAVETRRGDDKTIDRSPRLGSSGQPLQPEENXXXXXXXXXQDRPDLALRQLTDDFTEQQPSVFSTGTRSGRSANRGDGGGAALQSVLTDDIDLDEEEFMAYHEVNILAMQVALEMPEELRGDLPVEPKNHWEAQASPEWEHWQSAEEVEMQGLIDKGVWTKVERPKNKLVVSTMMIHKRKIGEDGKVEKCKFRLVAHRNRQIKGIHFQEASSSAPAATSTKMMLWLAAIEDWELRHVDVEQAYLQTPIDQEIFIKIPVKYRK--FPGAVGCLDKAVYGLVQAGRCWSMKVTADLTEKGFEQSHAGPCVFRKVGDGEVFAVMI 1653
            L GPM+V S+GG  YV ++VDDYSR+  V+FI+ KS   A+ + +  +  T KG  +  IR+D GG F      K  +E GI H+ + P TPQ NGV ER+   L+     + Q    GG+   + WAEA+N AC I N        G    YE   G T  L Y   FR  G    I+       K   R +E I LG S N  S   RVFN ++  ++E  N+ +   S        +AV         I  SP +    +   P E          +D+ +    ++TD   E +  V    T+  R+ +  D  G   +   T  I L+ ++ ++   +       A            +EP+NH EA    +W     + E E++  +   VW  V  P+   VV T  I K K  + G + + K RLVA    Q++G+ F E  +      S ++ L +A I ++++  +DV+ A+L   + +E+++  P  +     P  V  L KA+YGL QA + W   +T  L + G+ +      +F    + E+  V I
Sbjct:  546 LMGPMQVESIGGKRYVYVLVDDYSRYTWVRFIRDKSDTVASFKIWALQVITEKGS-LKCIRSDHGGEFQNKVMTKFCNEQGIAHQFSAPRTPQMNGVVERKNRTLQ----EMAQAMIHGGNIPVKFWAEAINTACYIINRVYMRKALGKT-PYELWKGKTPNLSY---FRVFGCRCFILNDKDQLGKFDSRSDEGIFLGYSGN--SSAFRVFNFQSKMVMESVNVVFDDRS--------IAV---------IGDSP-VFHEAESKTPAEEEVDGTSEKDEDKEE----EMTDKVVEVRHPV----TQVHRNHSSSDLIGDITEGRKTRGIKLNFKQMVSMAIIQFECFVSA------------IEPQNHLEALEDADWI---ISMEEELEEFVRNDVWELVPLPEGVNVVGTKWIFKNKTDDAGSIVRNKSRLVAQGYSQVEGVDFDETFAPVARLESIRLFLGIACILNFKVHQMDVKSAFLNGILQEEVYVAQPKGFEDPTHPDYVYKLKKALYGLKQAPKAWYEHLTKFLIDTGYVRGTVDKTLFILEKEDEIMMVQI 1054          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42960.10980.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J594_9PHAE5.370e-5331.05Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JB16_9PHAE2.230e-5130.14Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JRL9_9PHAE7.070e-4727.56Integrase catalytic domain-containing protein n=2 ... [more]
UPI00202469D11.780e-4326.68DDE-type integrase/transposase/recombinase n=3 Tax... [more]
A0A6H5K622_9PHAE4.010e-4330.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZH7_9PHAE7.670e-4328.53Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6S7HNY1_PARCT3.310e-4227.54Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A075B3L7_ROZAC4.330e-4226.95Integrase, catalytic core domain-containing protei... [more]
A0A6H5KKK1_9PHAE4.490e-4227.16Integrase catalytic domain-containing protein n=2 ... [more]
A0A1J3ITQ9_NOCCA1.480e-4128.88Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig42960contigH-paniculata_contig42960:7..1710 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score120.6
Seed ortholog evalue1.6e-24
Seed eggNOG ortholog15368.BRADI4G04484.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs37V5Q@33090,3GFFK@35493,3IKJW@38820,3M7B5@4447,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPoales
Best eggNOG OGNA|NA|NA
Exons2
Model size1656
Cds size1146
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig42960.10980.1prot_H-paniculata_contig42960.10980.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig42960 7..1200 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930306.1618764-CDS-H-paniculata_contig42960:6..8971622930306.1618764-CDS-H-paniculata_contig42960:6..897Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig42960 7..897 -
1691481234.255043-CDS-H-paniculata_contig42960:6..8971691481234.255043-CDS-H-paniculata_contig42960:6..897Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig42960 7..897 -
1622930306.1793694-CDS-H-paniculata_contig42960:945..12001622930306.1793694-CDS-H-paniculata_contig42960:945..1200Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig42960 946..1200 -
1691481234.2757232-CDS-H-paniculata_contig42960:945..12001691481234.2757232-CDS-H-paniculata_contig42960:945..1200Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig42960 946..1200 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930306.2018266-UTR-H-paniculata_contig42960:1200..17101622930306.2018266-UTR-H-paniculata_contig42960:1200..1710Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig42960 1201..1710 -
1691481234.2855742-UTR-H-paniculata_contig42960:1200..17101691481234.2855742-UTR-H-paniculata_contig42960:1200..1710Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig42960 1201..1710 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig42960.10980.1

>prot_H-paniculata_contig42960.10980.1 ID=prot_H-paniculata_contig42960.10980.1|Name=mRNA_H-paniculata_contig42960.10980.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=382bp
MRKIIPKHKMVPRGEECIMLGISHNHPSGTVRVFNVKTGHIVERQNISWH
PESPENQEGGGLAVETRRGDDKTIDRSPRLGSSGQPLQPEENEEERQQEE
KQDRPDLALRQLTDDFTEQQPSVFSTGTRSGRSANRGDGGGAALQSVLTD
DIDLDEEEFMAYHEVNILAMQVALEMPEELRGDLPVEPKNHWEAQASPEW
EHWQSAEEVEMQGLIDKGVWTKVERPKNKLVVSTMMIHKRKIGEDGKVEK
CKFRLVAHRNRQIKGIHFQEASSSAPAATSTKMMLWLAAIEDWELRHVDV
EQAYLQTPIDQEIFIKIPVKYRKFPGAVGCLDKAVYGLVQAGRCWSMKVT
ADLTEKGFEQSHAGPCVFRKVGDGEVFAVMII
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mRNA from alignment at H-paniculata_contig42960:7..1710-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig42960.10980.1 ID=mRNA_H-paniculata_contig42960.10980.1|Name=mRNA_H-paniculata_contig42960.10980.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1704bp|location=Sequence derived from alignment at H-paniculata_contig42960:7..1710- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGGGCGGACCCATGCGAGTAACCAGCTTGGGCGGTAGCTCGTATGTGAT GATCATTGTCGACGACTATTCACGGTTCCAGGCTGTCAAGTTCATCAAGA AGAAGAGCCATGCCACTGCAGCTCTCCAGAGCTACATCGCCGAACACACC ACGCCGAAAGGACTCCGGATCGGCAACATTCGTACCGACAGTGGGGGGTT CGATGGCGATTTTCATCTCAAGATGGACGAGCACGGCATTAATCACGAAC TCACGCCCCCGAACACACCGCAATACAATGGCGTTGCCGAAAGGCGGCTA GGTCTGCTCCGTGTGAAAACGATCGCATTGATGCAGGATCAGACGGAGGG GGGCAGCGAGAGACTATGGGCGGAGGCGGTGAACTACGCCTGCGATATCA CCAATATGAGCTGCACTTCGTCCATCGAAGGAAACGTTATCTCGTACGAG AAGTGTTACGGGACTACAGCGCCGCTGGAATACCTATAAACTTTTAGGAC GGTGGGCTACATGCGCAAGATCATCCCGAAACACAAGATGGTGCCAAGAG GAGAGGAGTGCATCATGCTGGGTATTTCCCACAACCACCCGAGCGGAACT GTCCGCGTTTTCAACGTCAAGACAGGACATATTGTGGAACGTCAGAATAT TTCATGGCACCCCGAGAGCCCAGAGAACCAGGAAGGGGGTGGCCTCGCCG TGGAGACCAGGAGGGGGGATGATAAGACCATCGATCGGAGTCCACGGCTT GGCAGCAGCGGACAGGTGGAGCTGGAGACGACGCCGACAATGCAACCGCA CTAGGAAGACTAGCCGCTGCAGCCCGAAGAAAACGAGGAGGAACGACAGC AGGAGGAGAAGCAGGATAGGCCTGACCTCGCGCTGCGCCAGCTAACCGAC GATTTCACGGAGCAGCAGCCGTCGGTTTTCTCTACGGGTACTAGAAGCGG CAGGAGCGCGAACAGGGGCGACGGTGGTGGAGCTGCGCTACAAAGCGTCC TCACGGACGACATTGACCTCGACGAGGAGGAATTCATGGCTTACCACGAA GTCAACATCTTGGCGATGCAGGTCGCACTGGAGATGCCCGAAGAACTGAG GGGTGACCTCCCCGTGGAGCCCAAGAATCATTGGGAGGCGCAGGCATCGC CGGAGTGGGAACACTGGCAAAGCGCGGAGGAAGTCGAGATGCAAGGTCTC ATCGACAAAGGGGTTTGGACGAAGGTGGAGCGCCCGAAAAACAAATTGGT CGTGAGCACGATGATGATCCACAAAAGGAAAATCGGCGAGGACGGCAAAG TCGAGAAATGCAAGTTCCGCCTGGTCGCCCACAGGAACCGTCAGATCAAG GGCATTCACTTCCAGGAAGCCTCGTCTTCTGCACCCGCAGCGACCAGCAC AAAAATGATGTTGTGGCTTGCGGCAATCGAGGACTGGGAGCTTCGGCACG TTGACGTTGAACAAGCGTACCTGCAGACGCCCATCGACCAAGAGATTTTC ATCAAAATTCCCGTGAAATACCGGAAGTTCCCAGGAGCGGTGGGGTGCCT CGACAAGGCAGTCTACGGATTGGTGCAAGCCGGCAGATGCTGGAGTATGA AGGTTACCGCGGACCTCACCGAGAAAGGGTTCGAGCAATCGCACGCCGGT CCGTGTGTGTTCCGCAAGGTCGGGGACGGGGAGGTGTTCGCAGTGATGAT CATA
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Coding sequence (CDS) from alignment at H-paniculata_contig42960:7..1710-

>mRNA_H-paniculata_contig42960.10980.1 ID=mRNA_H-paniculata_contig42960.10980.1|Name=mRNA_H-paniculata_contig42960.10980.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2292bp|location=Sequence derived from alignment at H-paniculata_contig42960:7..1710- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGCAAGATCATCCCGAAACACAAGATGGTGCCAAGAGGAGAGGAGTG
CATCATGCTGGGTATTTCCCACAACCACCCGAGCGGAACTGTCCGCGTTT
TCAACGTCAAGACAGGACATATTGTGGAACGTCAGAATATTTCATGGCAC
CCCGAGAGCCCAGAGAACCAGGAAGGGGGTGGCCTCGCCGTGGAGACCAG
GAGGGGGGATGATAAGACCATCGATCGGAGTCCACGGCTTGGCAGCAGCG
GACAGATGCGCAAGATCATCCCGAAACACAAGATGGTGCCAAGAGGAGAG
GAGTGCATCATGCTGGGTATTTCCCACAACCACCCGAGCGGAACTGTCCG
CGTTTTCAACGTCAAGACAGGACATATTGTGGAACGTCAGAATATTTCAT
GGCACCCCGAGAGCCCAGAGAACCAGGAAGGGGGTGGCCTCGCCGTGGAG
ACCAGGAGGGGGGATGATAAGACCATCGATCGGAGTCCACGGCTTGGCAG
CAGCGGACAGCCGCTGCAGCCCGAAGAAAACGAGGAGGAACGACAGCAGG
AGGAGAAGCAGGATAGGCCTGACCTCGCGCTGCGCCAGCTAACCGACGAT
TTCACGGAGCAGCAGCCGTCGGTTTTCTCTACGGGTACTAGAAGCGGCAG
GAGCGCGAACAGGGGCGACGGTGGTGGAGCTGCGCTACAAAGCGTCCTCA
CGGACGACATTGACCTCGACGAGGAGGAATTCATGGCTTACCACGAAGTC
AACATCTTGGCGATGCAGGTCGCACTGGAGATGCCCGAAGAACTGAGGGG
TGACCTCCCCGTGGAGCCCAAGAATCATTGGGAGGCGCAGGCATCGCCGG
AGTGGGAACACTGGCAAAGCGCGGAGGAAGTCGAGATGCAAGGTCTCATC
GACAAAGGGGTTTGGACGAAGGTGGAGCGCCCGAAAAACAAATTGGTCGT
GAGCACGATGATGATCCACAAAAGGAAAATCGGCGAGGACGGCAAAGTCG
AGAAATGCAAGTTCCGCCTGGTCGCCCACAGGAACCGTCAGATCAAGGGC
ATTCACTTCCAGGAAGCCTCGTCTTCTGCACCCGCAGCGACCAGCACAAA
AATGATGTTGTGGCTTGCGGCAATCGAGGACTGGGAGCTTCGGCACGTTG
ACGTTGAACAAGCGTACCTGCAGACGCCCATCGACCAAGAGATTTTCATC
AAAATTCCCGTGAAATACCGGAAGTTCCCAGGAGCGGTGGGGTGCCTCGA
CAAGGCAGTCTACGGATTGGTGCAAGCCGGCAGATGCTGGAGTATGAAGG
TTACCGCGGACCTCACCGAGAAAGGGTTCGAGCAATCGCACGCCGGTCCG
TGTGTGTTCCGCAAGGTCGGGGACGGGGAGGTGTTCGCAGTGATGATCAT
ACCGCTGCAGCCCGAAGAAAACGAGGAGGAACGACAGCAGGAGGAGAAGC
AGGATAGGCCTGACCTCGCGCTGCGCCAGCTAACCGACGATTTCACGGAG
CAGCAGCCGTCGGTTTTCTCTACGGGTACTAGAAGCGGCAGGAGCGCGAA
CAGGGGCGACGGTGGTGGAGCTGCGCTACAAAGCGTCCTCACGGACGACA
TTGACCTCGACGAGGAGGAATTCATGGCTTACCACGAAGTCAACATCTTG
GCGATGCAGGTCGCACTGGAGATGCCCGAAGAACTGAGGGGTGACCTCCC
CGTGGAGCCCAAGAATCATTGGGAGGCGCAGGCATCGCCGGAGTGGGAAC
ACTGGCAAAGCGCGGAGGAAGTCGAGATGCAAGGTCTCATCGACAAAGGG
GTTTGGACGAAGGTGGAGCGCCCGAAAAACAAATTGGTCGTGAGCACGAT
GATGATCCACAAAAGGAAAATCGGCGAGGACGGCAAAGTCGAGAAATGCA
AGTTCCGCCTGGTCGCCCACAGGAACCGTCAGATCAAGGGCATTCACTTC
CAGGAAGCCTCGTCTTCTGCACCCGCAGCGACCAGCACAAAAATGATGTT
GTGGCTTGCGGCAATCGAGGACTGGGAGCTTCGGCACGTTGACGTTGAAC
AAGCGTACCTGCAGACGCCCATCGACCAAGAGATTTTCATCAAAATTCCC
GTGAAATACCGGAAGTTCCCAGGAGCGGTGGGGTGCCTCGACAAGGCAGT
CTACGGATTGGTGCAAGCCGGCAGATGCTGGAGTATGAAGGTTACCGCGG
ACCTCACCGAGAAAGGGTTCGAGCAATCGCACGCCGGTCCGTGTGTGTTC
CGCAAGGTCGGGGACGGGGAGGTGTTCGCAGTGATGATCATA
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