mRNA_H-paniculata_contig4291.10971.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4291.10971.1 vs. uniprot
Match: D8LU90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU90_ECTSI) HSP 1 Score: 277 bits (708), Expect = 5.520e-88 Identity = 130/235 (55.32%), Postives = 163/235 (69.36%), Query Frame = 1
Query: 1 SPLSQIGKQVAVSSYPVGPPYLLHPRDWARVIKLWVAMCPEVYARHPGILAEMYGYCIGAAHIGLRHRVAYGLMVSDPTME-KEGWPMVDSLKTRACDASAIASQREHLPPLLHYCQMYRVGTYMYGKRHKNHHHFFSCGADAFQEPPAHYLESPMGKVRIHPGR----------EEPVTADRATRQGYMMCSLLRYMNLAQAAFKQRYCSPDEISGDVWRFTDLKPKVVAADQY 672
SP + + A+S YPVGPPY++HPRDWARV+ LWVA+ P+V+ HPGILAEMYG+CI AAHIGLRHRVAYGLMVSD M KEGWP+VD + T CD ++ +R LPP++HYCQMYRVGT+M+GKRH+ H FF C +D+ + PP YL PM +VR+HP R E V A RQGY MC++LR MN A +K RYC ++SG V RFTDL + + AD+Y
Sbjct: 254 SPARAVSTEEAISGYPVGPPYMMHPRDWARVLDLWVALSPKVHKGHPGILAEMYGFCIAAAHIGLRHRVAYGLMVSDAGMPGKEGWPLVDQMGTSVCDPESVDHRRGSLPPIVHYCQMYRVGTFMWGKRHRTHQTFFGCHSDSLELPPPDYLAGPMAEVRVHPRRGRAQLGEQAEPERVPAVTGMRQGYAMCAVLRAMNEALVKYKYRYCERGDVSGGVRRFTDLSREQLDADEY 488
BLAST of mRNA_H-paniculata_contig4291.10971.1 vs. uniprot
Match: A0A836CDP3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDP3_9STRA) HSP 1 Score: 159 bits (402), Expect = 5.330e-43 Identity = 92/234 (39.32%), Postives = 121/234 (51.71%), Query Frame = 1
Query: 1 SPLSQIGKQVAVSSYPVGPPYLLHPRDWARVIKLWVAMCPEVYARHPGILAEMYGYCIGAAHIGLRHRVAYGLMVSDPTMEKEG--WPMVDSLKTR-AC-------DASAIASQREHLPPLLHYCQMYRVGTYMYGKRHKNHHHFFSCGADAFQEPPAHYLESPMGKVRIHP-GREEPVTADRATRQGYMMCSLLRYMNLAQAAFKQRYCSPDEISGDVWR---FTDLKPKVVA 660
SP + A YPVGPPYL H RD A + WV Y HPGIL+EMY +CI AAH+ L H V MVSDP E W +V++L C DA ++ LP + HYC ++R G YM+GKR + H F+C A EPP H + +V++HP R E VT A R +M+C+L R +N A F+Q C +E + + R TDL P V+A
Sbjct: 192 SPALSVPLDQAAKHYPVGPPYLAHVRDMAALADKWVEFVARTYEGHPGILSEMYAFCIAAAHLRLPHHVIRSYMVSDPNNRDEDAPWALVEALSDEDVCRALGPPLDALPASAPIPTLPVVAHYCHVFRAGLYMFGKRRRGLHGVFACDAQYLAEPPPH---AGALRVKVHPPDRVEQVTRRTAVRNAFMVCALTRLLNEALLDFRQARCGAEEFAAGLSRVRPLTDLSPAVLA 422
BLAST of mRNA_H-paniculata_contig4291.10971.1 vs. uniprot
Match: A0A7S1D2M9_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D2M9_CYCTE) HSP 1 Score: 122 bits (307), Expect = 1.380e-29 Identity = 70/206 (33.98%), Postives = 104/206 (50.49%), Query Frame = 1
Query: 1 SPLSQIGKQVAVSSYPVGPPYLLHPRDWARVIKLWVAMCPEVYARHPGILAEMYGYCIGAAHIGLRHRVAYGLMVSDPTMEKEGWPMVDSLKTRACDASAIASQREH----LPPLLHYCQMYRVG-TYMYGKRHKNHHHFFSCGADAFQEPPAHYLESPMGKVRIHPGREEPVTADRAT--RQGYMMCSLLRYMNLAQAAFKQRYC 597
SP + K+ YP GPPYL +D + +W P+VYA++P +LAEMY +CI AAH+GL+H++ +MVS+ EGWP+VD + D H LP ++H CQ Y VG + +GKR K + C F EPP + + P +E + A R+ +M+C L R +N A +K++ C
Sbjct: 156 SPTKLVTKEDGALFYPAGPPYLATVKDMYNIAVMWTEFAPKVYAQYPHLLAEMYAFCIAAAHLGLKHQLVDSIMVSNTEASGEGWPLVDKIPND--DICEFGKNPRHEVYALPSVVHLCQRYSVGDAWFFGKR-KVPADIYECETPLFTEPPRDVVN--QYDYKWPPNAKEKTALEPAILKREAFMVCYLTRLVNDAATYYKKQSC 356
BLAST of mRNA_H-paniculata_contig4291.10971.1 vs. uniprot
Match: A0A7S4N1U4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N1U4_9STRA) HSP 1 Score: 122 bits (305), Expect = 2.950e-29 Identity = 72/205 (35.12%), Postives = 101/205 (49.27%), Query Frame = 1
Query: 1 SPLSQIGKQVAVSSYPVGPPYLLHPRDWARVIKLWVAMCPEVYARHPGILAEMYGYCIGAAHIGLRHRVAYGLMVSDPTMEKEGWPMVDSLKTRACDASAIAS---QREHLPPLLHYCQMYRVGTYMYGKRHKNHHHFFSCGADAFQEPPAHYLESPMGKVRIHPGREEPVTADR--ATRQGYMMCSLLRYMNLAQAAFKQRYCS 600
SP ++ K YPVGPPYL RD + W P V+A++P +LAEMY YCI AAH+ L H+ LMVS+ EGW V+ + A + + LP ++H CQ Y VG +++ KR K H FF+C + PP + K +I P + V A +MMC + Y+N A FK++ CS
Sbjct: 164 SPALRVSKDDGRDFYPVGPPYLGTARDMHAIATKWSEFAPRVHAQYPHLLAEMYAYCIAAAHLKLPHQKINSLMVSNSGTGGEGWSFVEKIPPSEVCAFMVDGPDHSKYALPSVMHLCQRYIVGPWLFAKR-KMPHDFFTCEHQLLEVPPPDLAK--RFKYKIKPAEQVKVDISEKVAHEDAFMMCGTIGYLNEAGTYFKRKGCS 365
BLAST of mRNA_H-paniculata_contig4291.10971.1 vs. uniprot
Match: A0A7S2GWL2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GWL2_9STRA) HSP 1 Score: 123 bits (309), Expect = 5.030e-29 Identity = 64/207 (30.92%), Postives = 107/207 (51.69%), Query Frame = 1
Query: 1 SPLSQIGKQVAVSSYPVGPPYLLHPRDWARVIKLWVAMCPEVYARHPGILAEMYGYCIGAAHIGLRHRVAYGLMVSDPTMEKEGWPMVDSL-KTRACDASAIASQREH-LPPLLHYCQMYRVGTYMYGKRHKNHHHFFSCGADAFQEPPAHYLESPMGKVRIHPGREEPVTADRATRQGYMMCSLLRYMNLAQAAFKQRYCSPDEIS 615
SP + + YP GPPY+ RD + W P ++ +P +LAEMY YC+ AAH+ L H++ +MVS EGWPMV+++ + CD + A ++ +P +HYCQ Y VGT+++ KR K H F+C + F PP+ + + K ++ +T +++C+LL + A FK+ +C + ++
Sbjct: 338 SPAKDVVRAEGALHYPGGPPYIATARDMYAISIKWAEFAPRLHEGYPHLLAEMYAYCVAAAHLRLPHQLVDSIMVSSQQTGGEGWPMVNTIPEDEVCDVAINADHEKYPIPSTVHYCQRYSVGTWLWAKR-KVPHDIFTCESPIFASPPSTDVINLKHKFENRGDVKKEMTDKEWKHNAFVVCALLNGVAEAMEFFKEMHCDKESVN 543
BLAST of mRNA_H-paniculata_contig4291.10971.1 vs. uniprot
Match: A0A7S4JEG4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JEG4_9STRA) HSP 1 Score: 122 bits (305), Expect = 1.870e-28 Identity = 72/205 (35.12%), Postives = 101/205 (49.27%), Query Frame = 1
Query: 1 SPLSQIGKQVAVSSYPVGPPYLLHPRDWARVIKLWVAMCPEVYARHPGILAEMYGYCIGAAHIGLRHRVAYGLMVSDPTMEKEGWPMVDSLKTRACDASAIAS---QREHLPPLLHYCQMYRVGTYMYGKRHKNHHHFFSCGADAFQEPPAHYLESPMGKVRIHPGREEPVTADR--ATRQGYMMCSLLRYMNLAQAAFKQRYCS 600
SP ++ K YPVGPPYL RD + W P V+A++P +LAEMY YCI AAH+ L H+ LMVS+ EGW V+ + A + + LP ++H CQ Y VG +++ KR K H FF+C + PP + K +I P + V A +MMC + Y+N A FK++ CS
Sbjct: 338 SPALRVSKDDGRDFYPVGPPYLGTARDMHAIATKWSEFAPRVHAQYPHLLAEMYAYCIAAAHLKLPHQKINSLMVSNSGTGGEGWSFVEKIPPSEVCAFMVDGPDHSKYALPSVMHLCQRYIVGPWLFAKR-KMPHDFFTCEHQLLEVPPPDLAK--RFKYKIKPAEQVKVDISEKVAHEDAFMMCGTIGYLNEAGTYFKRKGCS 539
BLAST of mRNA_H-paniculata_contig4291.10971.1 vs. uniprot
Match: A0A7S0CC93_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CC93_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.740e-27 Identity = 69/202 (34.16%), Postives = 109/202 (53.96%), Query Frame = 1
Query: 1 SPLSQIGKQVAVSSYPVGPPYLLHPRDWARVIKLWVAMCPEVYARHPGILAEMYGYCIGAAHIGLRHRVAYGLMVSDPTMEKEGWPMVDSLKT-RACDASAIASQREHLPPLLHYCQMYRVGTYMYGKRHKNHHHFFSCGADAFQEPPAHYLESPMGKVRIHPGREEPVTADRATRQ-GYMMCSLLRYMNLAQAAFKQRYCS 600
SP ++ + ++S Y VGPPY+ RD + W P+V+ +P +LAEM+ YC+ AAH L H + LMVS T EGWP++ ++ + C+ + +P ++H+CQ Y G + +GKR K FF+C PP + L S KV + +E+ V RA +Q +M+C L ++N A FK+++CS
Sbjct: 109 SPALEVTESESLSFYTVGPPYIATARDMYSISVKWAEFAPKVHNEYPHLLAEMFAYCLAAAHTKLPHTLVDSLMVSC-TGCAEGWPLLGNIPSDEVCEFPGSMKTGDRVPHVIHFCQRYMAGEWFFGKR-KLPKDFFTCEHPLLATPPKN-LASIDYKV-LPSKKEKVVIGTRAAKQEAFMICGLTVFLNDAAEFFKEKHCS 306
BLAST of mRNA_H-paniculata_contig4291.10971.1 vs. uniprot
Match: A0A7S3DXN7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DXN7_9STRA) HSP 1 Score: 118 bits (296), Expect = 2.390e-27 Identity = 70/195 (35.90%), Postives = 111/195 (56.92%), Query Frame = 1
Query: 43 YPVGPPYLLHPRDWARVIKLWVAMCPEVYARHPGILAEMYGYCIGAAHIGLRHRVAYGLMVSDPT--MEKEGWPMVDSLK-TRACD-ASAIA---SQREHLPPLLHYCQMYRVGT-YMYGKRHKNHHHFFSCGADAFQEPPAHYLESPMGKVRIHPGRE-EPVTADRATRQGYMMCSLLRYMNLAQAAFKQRYCS 600
YPVGPPYL D R+ + W A P+V+A++P +LAEM+ +CI AAH+ L H++ LMVSD T ++ EGW +VD+++ T+ C A A+ + ++P ++H CQ Y +G+ + + KR + C F EPP L + + ++ P E +PV A R +M+C + R +N A +K+ CS
Sbjct: 296 YPVGPPYLATVVDMYRISEKWTAYVPKVHAQYPHLLAEMFAFCIAAAHLELPHQLISSLMVSDVTGGVDLEGWSLVDAIEPTQVCSTAKALVGYPAPTANVPQVVHMCQRYGLGSEWFFTKRKIPSDSLYDCETPLFAEPPDD-LATKLDFKQLPPAYERKPVDPGEAKRMSFMLCYVYRLLNDAATFYKKNACS 489
BLAST of mRNA_H-paniculata_contig4291.10971.1 vs. uniprot
Match: A0A7S2LB62_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LB62_9STRA) HSP 1 Score: 116 bits (290), Expect = 1.280e-26 Identity = 65/195 (33.33%), Postives = 101/195 (51.79%), Query Frame = 1
Query: 37 SSYPVGPPYLLHPRDWARVIKLWVAMCPEVYARHPGILAEMYGYCIGAAHIGLRHRVAYGLMVSDPTMEK-EGWPMVDSLKT-RACDASAIASQREHLPPLLHYCQMYRVGTYMYGKRHKNHHHFFSCGADAFQEPPAHYLES------PMGKVRIHPGREEPVTADRATRQGYMMCSLLRYMNLAQAAFKQRYC 597
++YP GPPY+ +D ++ W + P V+ + +L EMYG+ +GAAH+GL H +A M+S + + EGW ++D+LK C+ S + + LP +H+CQ Y +G + GK ++ F C EPP + P GK G +EPV + A R+ +M+C L+ N A A FK C
Sbjct: 257 NNYPGGPPYMATGKDMWSIVSAWTELVPNVHHVYKHLLGEMYGWSLGAAHVGLPHTLAESFMISATQIGRGEGWQLIDALKDDEVCEYSVMKEYEDKLPYTMHFCQNYWLGKWFIGK-YRLDSDFLKCDKTLLMEPPKDIAKQFDFYIKPGGKPY---GVKEPVRPEVAKREAFMICQLISRFNDAAAWFKDTTC 447
BLAST of mRNA_H-paniculata_contig4291.10971.1 vs. uniprot
Match: A0A7S2A9I2_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9I2_TRICV) HSP 1 Score: 107 bits (267), Expect = 4.630e-26 Identity = 53/126 (42.06%), Postives = 75/126 (59.52%), Query Frame = 1
Query: 43 YPVGPPYLLHPRDWARVIKLWVAMCPEVYARHPGILAEMYGYCIGAAHIGLRHRVAYGLMVSDPTMEKEGWPMVDSLKTR-ACD-ASAIASQREHLPPLLHYCQMYRVGTYMYGKRHKNHHHFFSC 414
YP GPPYL D ++ W P V++++P +LAEMY YCI AAH+ L H++ LMVS M+ EGW +D + C SA+ ++E +P +LHYCQ Y +G + +GKR + FFSC
Sbjct: 4 YPAGPPYLATALDMYQIAVKWTEFVPRVHSQYPDLLAEMYAYCIAAAHLKLPHKIVNSLMVSSTEMDNEGWSELDRIPGHDVCHLTSALDYRKEGIPYVLHYCQRYMLGKHFFGKR-RLPKDFFSC 128 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4291.10971.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4291.10971.1 >prot_H-paniculata_contig4291.10971.1 ID=prot_H-paniculata_contig4291.10971.1|Name=mRNA_H-paniculata_contig4291.10971.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=226bp SPLSQIGKQVAVSSYPVGPPYLLHPRDWARVIKLWVAMCPEVYARHPGILback to top mRNA from alignment at H-paniculata_contig4291:12313..15835- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4291.10971.1 ID=mRNA_H-paniculata_contig4291.10971.1|Name=mRNA_H-paniculata_contig4291.10971.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3523bp|location=Sequence derived from alignment at H-paniculata_contig4291:12313..15835- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4291:12313..15835- >mRNA_H-paniculata_contig4291.10971.1 ID=mRNA_H-paniculata_contig4291.10971.1|Name=mRNA_H-paniculata_contig4291.10971.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1356bp|location=Sequence derived from alignment at H-paniculata_contig4291:12313..15835- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |