prot_H-paniculata_contig429.10967.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig429.10967.1
Unique Nameprot_H-paniculata_contig429.10967.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length595
Homology
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BLAST of mRNA_H-paniculata_contig429.10967.1 vs. uniprot
Match: D7FYV2_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV2_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 5.850e-16
Identity = 100/231 (43.29%), Postives = 117/231 (50.65%), Query Frame = 0 
Query:  405 LTPREREEWVKAINDSPTDSEVLPAPQPRALWTSNAFSVDDR-------IPSGDSSMPAPQLESLRSS--------------------------SPRRVGSSSHXXXXXXXXXXXXXXXXXX-------------------DSEGPIQIHLLEGHADAIVPPARAEVVSPSQSAFGLRMDEDEGEAGEGEAPLEDEEDDFNSDLEG---DWDTEMGLMEPIVYTDLAQRLN 580
            LTP     W +   DSPTDSEV PAPQPRAL        ++R       +       PAPQ  +LR S                          S R++  + H   XXXXXXXXXXXXXXX                   DSEGP+Q+  L+G  D + PP R EVVSPSQSAFGLR  EDEGE GEGEAP E E++ F         DWDTEMGL E + Y+DLA RL+
Sbjct:  245 LTPAAGRPWEEY--DSPTDSEV-PAPQPRALGVGGTTDANERRQANTKWLKLSTGERPAPQPATLRPSTTAGRGAQDRASGERSENRVRARTGGSGRKLSRTKHDSSXXXXXXXXXXXXXXXXXKPKGASVLSFVDPQAEDDSEGPVQMSNLDGLGD-LPPPPRQEVVSPSQSAFGLRAYEDEGEDGEGEAPPEAEKEGFXXXXXXXXDDWDTEMGLEE-LEYSDLAIRLD 470
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BLAST of mRNA_H-paniculata_contig429.10967.1 vs. uniprot
Match: A0A6H5KJE7_9PHAE (DENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJE7_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 1.730e-12
Identity = 53/93 (56.99%), Postives = 62/93 (66.67%), Query Frame = 0 
Query:  494 DSEGPIQIHLLEGHADAIVPPARAEVVSPSQSAFGLRMDEDEGEAGEGEAPLEDEEDDFNSDLEG---DWDT---EMGLMEPIVYTDLAQRLN 580
            DSEGP+Q+  L+G  D + PP R EVVSPSQSAFGLR  EDEGE GEGEAP E E + F         DWDT   EMGL E + Y+DL+ RL+
Sbjct:   11 DSEGPVQMSNLDGSGD-LPPPPRQEVVSPSQSAFGLRAYEDEGEDGEGEAPSEAENEGFXXXXXXXXDDWDTVRVEMGLEE-LEYSDLSIRLD 101
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig429.10967.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYV2_ECTSI5.850e-1643.29PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KJE7_9PHAE1.730e-1256.99DENN domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig429contigH-paniculata_contig429:33283..37344 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig429.10967.1mRNA_H-paniculata_contig429.10967.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig429 33200..37344 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig429.10967.1 ID=prot_H-paniculata_contig429.10967.1|Name=mRNA_H-paniculata_contig429.10967.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=595bp
MKRADEKITASLSQTAASAYSSIMDMRPLRVQRGLGARTVSGKTHSVIGV
SANTQGGAEDWTDDFDLGAPHSTKPPSPAPHSPLAAALRRIAKEGESDAP
RERRRRPAGSNTTSKKGGTNTASAASSAPSTTQQPATRGVPKSVQLVKDA
TGRHTSNTGGGGGGGGGGDLSILAGAAAAAAAAAAYRSGGGSGSAHPNAG
ASTISSSSRRHRKEGSSSSHSGHDHHRESTRDSNEHRGGSSNSSRHAARS
RGEMRHSSSSVHSRRFTGEPQPQQQRHHRGQQQPQHQQQQQADDSSRSST
ARKPRREEPSQHSNHGHSGRTSRTTSSSHSSHHRGSGSSRRGEDGGGGSA
GETEQVVVPKRRRSKDEKNRGGRSSSVSSQSTTARKDEAGGSRGGSRSGK
RGERLTPREREEWVKAINDSPTDSEVLPAPQPRALWTSNAFSVDDRIPSG
DSSMPAPQLESLRSSSPRRVGSSSHRRASTSEQQASTSEQQEEDSEGPIQ
IHLLEGHADAIVPPARAEVVSPSQSAFGLRMDEDEGEAGEGEAPLEDEED
DFNSDLEGDWDTEMGLMEPIVYTDLAQRLNPPSGGGGPAGGRRGG
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