mRNA_H-paniculata_contig428.10951.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig428.10951.1 vs. uniprot
Match: D8LTV2_ECTSI ((R)-citramalate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTV2_ECTSI) HSP 1 Score: 739 bits (1908), Expect = 1.600e-262 Identity = 392/503 (77.93%), Postives = 420/503 (83.50%), Query Frame = 3
Query: 183 MVAATST-TLTKLGTNG---VHDRGADTDSITDMDTATVGFVGPKKEGLRVVELYDTTLRDGTQMEGISASVNDKLKIAKELHNFGMHYIEGGWPGSNPKDVEFFERAHVELPDEAWAKVVAFGSTRRKHKTCEEDKQLASLIAAGTNCVTIVAKAWDLHVDDILEVPREENLAMVRESVDHLRRAGKEVMLDLEHFFDGYKANAEYTMQVCEAAVQANVDVLVLCDTNGGTLPWEVDEIIGDVKAAYPEVRLGIHCHNDQGLAVANSLQAVRSGADVVQGTVNGIGERTGNANLMTIIPTLQLKMGAQGVEENLRNLTALSRFTDELASQHTKRIFPSPAYMFFNMAPSSGAPFTGLSAFAHKGGIHVSAVNKISESYQHIDPAQVGNVKRVLVSELSGQSNILSKVEESGMASKAELKASDVWRERLGQVLKTVKTLEKKGYTFEGADASVNLLVRRTMSGYVAPFKLIDYLVQTWDSEESTRGTEFRSAPTTARATVKVR 1679
MVA+ T T+T G NG DR A + MD P+ E LR VE+YDTTLRDGTQMEGISASV DKLKIA +LH+FGMHYIEGGWPGSNPKDVEFFERA ELP EAW +VVAFGSTRRK K C EDKQL SLI+AGT CVTIVAKAWDLHVD ILEVPREENLAMVRESV+HL+ AGKEVMLDLEHFFDG+KAN EYTMQVCEAAV A VDVLVLCDTNGG+LPWE+DEI+ DVKAAYP RLGIHCHNDQGLAVANSLQAVRSGADVVQGTVNGIGERTGNANLMTIIPTLQLKMG GV E+L NLTALSRFTDE FNMA +SGAPFTG+SAFAHKGGIHVSAVNKI +SYQHIDPAQVGN+KRVLVSELSGQSNILSKVE+SGMASK ELKAS VWRER+GQVLKTVK LE +GY++EGADASVNLLVRRTMSGYV PFKL+DYLVQ WDS+ + G EF S PTTARATVKVR
Sbjct: 1 MVASVPTSTVTTHGVNGDVGKGDRQATSPGALVMDQ-------PEGEVLRTVEMYDTTLRDGTQMEGISASVLDKLKIALQLHHFGMHYIEGGWPGSNPKDVEFFERARKELPAEAWERVVAFGSTRRKFKACAEDKQLESLISAGTGCVTIVAKAWDLHVDHILEVPREENLAMVRESVEHLKMAGKEVMLDLEHFFDGWKANREYTMQVCEAAVGAKVDVLVLCDTNGGSLPWEIDEIVRDVKAAYPGTRLGIHCHNDQGLAVANSLQAVRSGADVVQGTVNGIGERTGNANLMTIIPTLQLKMGMTGVGEHLTNLTALSRFTDEQ----------------FNMAHTSGAPFTGISAFAHKGGIHVSAVNKIPDSYQHIDPAQVGNMKRVLVSELSGQSNILSKVEDSGMASKTELKASKVWRERMGQVLKTVKRLETEGYSYEGADASVNLLVRRTMSGYVPPFKLLDYLVQIWDSDRTPGGLEFPSGPTTARATVKVR 480
BLAST of mRNA_H-paniculata_contig428.10951.1 vs. uniprot
Match: A0A836CCG4_9STRA ((R)-citramalate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCG4_9STRA) HSP 1 Score: 560 bits (1443), Expect = 7.100e-191 Identity = 309/502 (61.55%), Postives = 353/502 (70.32%), Query Frame = 3
Query: 318 RVVELYDTTLRDGTQMEGISASVNDKLKIAKELHNFGMHYIEGGWPGSNPKDVEFFERAHVELPDEAWAKVV-----------AFGSTRRKHKTCEEDKQLASLIAAGTNCVTIVAKAWDLHVDDILEVPREENLAMVRESVDHLRRAGKEVMLDLEHFFDGYKANAEYTMQVCEAAVQANVDVLVLCDTNGGTLPWEVDEIIGDVKAAYPEVRLGIHCHNDQGLAVANSLQAVRSGADVVQGTVNGIG--------------ERTGNANLMTIIPTLQLKMGAQGVEENLRNLTALSRFTDELASQHTKRIFPSPAYMFFNMAPSSGAPFTGLSAFAHKGGIHVSAVNKISESYQHIDPAQVGNVKRVLVSELSGQSNILSKVEESGMASKAELKASDVWRERLGQVLKTVKTLEKKGYTFEGADASVNLL------------------VRRTMSGYVAPFKLIDYLVQTWDS--EESTRGTEFR---SAPTTARATVKVR 1679
R+V++YDTTLRDGTQMEGIS SV+DKLKIA+ L NFGMHYIEGGWPGSNPKD EFFERA E P + W+++ AFGSTRRK+ TCE+DKQLA+LIAAGTNCVTIVAKAWDLHVD ILEVPREENLAMV ESV L+ AGKEVM+DLEHFFDG+KAN YTMQVCE AV+A DVLVLCDTNGGTL WEVD+ + V +A+P VRLGIHCHNDQ LAV+NSLQAV+SGA V ERTGNANL +I+PTLQLKMG GV E L LTAL RF DE N P S AP+ G SAFAHKGGIHVSAVNKI +SYQHIDPA VGNV+R LVSELSG+SNILSKVEE GM SK E +S W++R+ +VL VKTLEK+G TFEGADA+VNL+ +RR M GY APF+L+DY V D+ ++ RG E S + RATVKV+
Sbjct: 32 RLVDIYDTTLRDGTQMEGISVSVDDKLKIARVLSNFGMHYIEGGWPGSNPKDAEFFERAKAEPPPDVWSRIAEXXXXXXXXXAAFGSTRRKNSTCEQDKQLATLIAAGTNCVTIVAKAWDLHVDHILEVPREENLAMVGESVAFLKAAGKEVMIDLEHFFDGFKANPAYTMQVCERAVEAGADVLVLCDTNGGTLGWEVDQAVRTVASAFPGVRLGIHCHNDQELAVSNSLQAVQSGATVXXXXXXXXXXXXXXXXXXXXXXXERTGNANLASIVPTLQLKMGCAGVGERLPELTALCRFVDEQ----------------LNRLPDSKAPYVGQSAFAHKGGIHVSAVNKIPDSYQHIDPAAVGNVRRTLVSELSGRSNILSKVEEFGMGSKEEF-SSPEWQDRMNRVLTAVKTLEKRGSTFEGADATVNLIEPLRXXXXXXXXXXXXXMIRRLMPGYTAPFRLMDYTVTAADTMGSDALRGEETGTPGSVMPSVRATVKVK 516
BLAST of mRNA_H-paniculata_contig428.10951.1 vs. uniprot
Match: A0A7S2UWY3_9STRA ((R)-citramalate synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWY3_9STRA) HSP 1 Score: 533 bits (1372), Expect = 1.510e-180 Identity = 266/435 (61.15%), Postives = 332/435 (76.32%), Query Frame = 3
Query: 312 GLRVVELYDTTLRDGTQMEGISASVNDKLKIAKELHNFGMHYIEGGWPGSNPKDVEFFERAHVELPDEAWAKVVAFGSTRRKHKTCEEDKQLASLIAAGTNCVTIVAKAWDLHVDDILEVPREENLAMVRESVDHLRRAGKEVMLDLEHFFDGYKANAEYTMQVCEAAVQANVDVLVLCDTNGGTLPWEVDEIIGDVKAAYPEVRLGIHCHNDQGLAVANSLQAVRSGADVVQGTVNGIGERTGNANLMTIIPTLQLKMGAQGVEENLRNLTALSRFTDELASQHTKRIFPSPAYMFFNMAPSSGAPFTGLSAFAHKGGIHVSAVNKISESYQHIDPAQVGNVKRVLVSELSGQSNILSKVEESGMASK-AELKASDVWRERLGQVLKTVKTLEKKGYTFEGADASVNLLVRRTMSGYVAPFKLIDYLVQTWDSE 1613
G + VE+YDTTLRDGTQ E IS SV KL+IA+ L FG+HYIEGGWPGSNPKD EFFERA EL EA K+ AFGSTRRK K ED Q+A+L+ +G +C+ +V K+ D HVD ILEVPREENLAMV +S+ +L+ GKEVMLDLEHF DG+K+N +Y+M VC+AAV A VDVLV+CDTNGG+LPWEV + +V+ +PEVRLGIHCHNDQ LAVAN+L+AVR GA VVQGT+NG+GERTGNANL ++IP LQLKMG GV + L++LT++SRF+DEL N +P+ APF G SAFAHKGGIHVSA+ K SYQHI+P +VGN+KRVLVSEL+G+SNI++KVEE G+ + ++L +VW+ER Q+L VK LEK GYTFEGA+ASVNL++RR+ Y PF + DY++Q WD +
Sbjct: 88 GQQEVEIYDTTLRDGTQAESISVSVEGKLRIAERLAEFGVHYIEGGWPGSNPKDKEFFERAKTELSPEARTKLTAFGSTRRKFKKAAEDSQIAALVDSGVDCICLVGKSSDFHVDKILEVPREENLAMVHDSIHYLKGLGKEVMLDLEHFIDGFKSNPQYSMSVCQAAVDAGVDVLVMCDTNGGSLPWEVAHVTREVRKMFPEVRLGIHCHNDQELAVANTLEAVREGATVVQGTINGLGERTGNANLCSVIPNLQLKMGYHGVGDKLKDLTSVSRFSDEL----------------MNRSPNPAAPFVGASAFAHKGGIHVSAIAKNPLSYQHIEPEEVGNLKRVLVSELAGRSNIMTKVEEYGLIGQDSDL---NVWKERSVQILNKVKALEKSGYTFEGAEASVNLMLRRSSDMYTPPFAIQDYMLQIWDQD 503
BLAST of mRNA_H-paniculata_contig428.10951.1 vs. uniprot
Match: A0A6V1Q1T2_HETAK ((R)-citramalate synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1Q1T2_HETAK) HSP 1 Score: 496 bits (1277), Expect = 2.490e-166 Identity = 257/452 (56.86%), Postives = 315/452 (69.69%), Query Frame = 3
Query: 324 VELYDTTLRDGTQMEGISASVNDKLKIAKELHNFGMHYIEGGWPGSNPKDVEFFERAHVELPDEAWAKVVAFGSTRRKHKTCEEDKQLASLIAAGTNCVTIVAKAWDLHVDDILEVPREENLAMVRESVDHLRRAGKEVMLDLEHFFDGYKANAEYTMQVCEAAVQANVDVLVLCDTNGGTLPWEVDEIIGDVKAAYPEVRLGIHCHNDQGLAVANSLQAVRSGADVVQGTVNGIGERTGNANLMTIIPTLQLKMGAQGV-EENLRNLTALSRFTDELASQHTKRIFPSPAYMFFNMAPSSGAPFTGLSAFAHKGGIHVSAVNKISESYQHIDPAQVGNVKRVLVSELSGQSNILSKVEESGMASKAELKASDV----WRERLGQVLKTVKTLEKKGYTFEGADASVNLLVRRTMSGYVAPFKLIDYLVQTWDSEESTRGTEFRSAPTTARA 1664
+++YDTTLRDGTQ E +S +V+ KL IAK L FGM YIEGGWPGSNPKD EFF RA ELP W +VVAFGSTRRK E+DKQ+A L+ + CV IV K+WDLH+D+ILEVPREENLAMV +SV HL+ AG+EVMLDLEHFFDG ++ T+ VC AAV A VDVLVLCDTNGG LPWE++ + V A +P VRLGIHCHNDQ LAVANSL A+R+G +VQGTVNG+GERTGNANL +++PTLQLKMG GV LR LT LSRF DE+ N P++ P+ G SAFAHKGGIHVSA+ K SYQH+DP VGN +RVLVS+L+G+SNI++KV+E G+ +DV W + Q+L +K LEK GY+FEGA+ASV L++RR + Y PF ++DY Q D ++ R A A A
Sbjct: 81 LDIYDTTLRDGTQGESVSVTVDGKLAIAKRLGEFGMAYIEGGWPGSNPKDAEFFARARAELPLSTWRRVVAFGSTRRKFLPVEQDKQIAMLLESEAGCVCIVGKSWDLHIDEILEVPREENLAMVADSVAHLKAAGREVMLDLEHFFDGMASDPACTLDVCRAAVDAGVDVLVLCDTNGGRLPWEIEAGVRRVAAEFPGVRLGIHCHNDQELAVANSLAALRAGCSLVQGTVNGVGERTGNANLASLVPTLQLKMGYAGVGRAKLRELTGLSRFVDEM----------------MNRVPAASQPWVGASAFAHKGGIHVSAMAKNPASYQHVDPDVVGNTRRVLVSDLAGRSNIIAKVKEFGLC------VTDVECAAWADSSLQILNDIKVLEKMGYSFEGAEASVELMLRRMVENYAPPFNIVDYSCQIMDQVATSHTVTQRGAAAAAAA 510
BLAST of mRNA_H-paniculata_contig428.10951.1 vs. uniprot
Match: R7QGZ5_CHOCR ((R)-citramalate synthase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGZ5_CHOCR) HSP 1 Score: 468 bits (1205), Expect = 1.020e-156 Identity = 248/457 (54.27%), Postives = 313/457 (68.49%), Query Frame = 3
Query: 318 RVVELYDTTLRDGTQMEGISASVNDKLKIAKELHNFGMHYIEGGWPGSNPKDVEFFERAHVELPDEAWAKVVAFGSTRRKHKTCEEDKQLASLIAAGTNCVTIVAKAWDLHVDDILEVPREENLAMVRESVDHLRRAGKEVMLDLEHFFDGYKANAEYTMQVCEAAVQANVDVLVLCDTNGGTLPWEVDEIIGDVKAAYPEVRLGIHCHNDQGLAVANSLQAVRSGADVVQGTVNGIGERTGNANLMTIIPTLQLKMGAQGVEENLRNLTALSRFTDELASQHTKRIFPSPAYMFFNMAPSSGAPFTGLSAFAHKGGIHVSAVNKISESYQHIDPAQVGNVKRVLVSELSGQSNILSKVEESGMASKAE-LKASDVWRERLGQVLKTVKTLEKKGYTFEGADASVNLLVRRTMSGYVAPFKLIDYLVQTWDSEESTRGTEFRSAP---TTARATVKV 1676
R +++YDTTLRDG Q EGIS SV DKLKIA L FG HYIEGGWPGSNPKD FFE +L AK+VAFGSTR K+ TCE+D+ + L A T VT+V KAWD+ V +LE EENL M+RESV + +R G+EVMLD EHF+DGYKA EY + +AAV VDVLVLCDTNGG++PW++ ++ V +P R+G+HCHND LAVANS+ AV +GA +VQGTVNG GERTGNANLM+I+PTLQLK+G V + L LT+LSRF DE+A Q P SG PF G+S+FAHKGG+HV+AV K ++YQHIDP+ VGN KR+LVSEL+G+ N+LSK EE G+ + A W R QVL VK LE KGY+FEGA+AS+ L++RR++ GY PF+L+D+ V T D++ G P + +ATVK+
Sbjct: 6 RCIQVYDTTLRDGAQGEGISLSVADKLKIATRLDEFGAHYIEGGWPGSNPKDAAFFENCRGKLKR---AKLVAFGSTRYKNTTCEKDRNVQMLANADTLVVTLVGKAWDMQVQVVLEASLEENLDMIRESVAYFKRLGREVMLDAEHFYDGYKAAPEYAIACLQAAVDGGVDVLVLCDTNGGSVPWDLQKVTATVVHRFPATRVGVHCHNDMELAVANSISAVNAGASLVQGTVNGYGERTGNANLMSIVPTLQLKLGYACVGDALSKLTSLSRFVDEIACQK----------------PVSGQPFVGVSSFAHKGGLHVAAVLKNEDTYQHIDPSLVGNEKRILVSELAGRRNVLSKAEELGLVPAGDDAGARQEWGNRAKQVLGQVKDLENKGYSFEGAEASLELMLRRSVEGYRPPFELLDFSVTT-DNKRIHYGPNSEGPPFNESVTQATVKI 442
BLAST of mRNA_H-paniculata_contig428.10951.1 vs. uniprot
Match: A0A2V3IHB1_9FLOR ((R)-citramalate synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHB1_9FLOR) HSP 1 Score: 462 bits (1190), Expect = 3.790e-154 Identity = 245/452 (54.20%), Postives = 311/452 (68.81%), Query Frame = 3
Query: 297 GPKKEGLRVVELYDTTLRDGTQMEGISASVNDKLKIAKELHNFGMHYIEGGWPGSNPKDVEFFERAHVELPDEAWAKVVAFGSTRRKHKTCEEDKQLASLIAAGTNCVTIVAKAWDLHVDDILEVPREENLAMVRESVDHLRRAGKEVMLDLEHFFDGYKANAEYTMQVCEAAVQANVDVLVLCDTNGGTLPWEVDEIIGDVKAAYPEVRLGIHCHNDQGLAVANSLQAVRSGADVVQGTVNGIGERTGNANLMTIIPTLQLKMGAQGVEENLRNLTALSRFTDELASQ-HTKRIFPSPAYMFFNMAPSSGAPFTGLSAFAHKGGIHVSAVNKISESYQHIDPAQVGNVKRVLVSELSGQSNILSKVEESGMASKAELKASDVWRERLGQVLKTVKTLEKKGYTFEGADASVNLLVRRTMSGYVAPFKLIDYLVQTWDSEESTRGTEFRSAP 1649
G ++ + V++YDTTLRDG+Q EGIS +V DKLK+A+ L FG HYIEGGWPGSNPKD FF A + D A K+VAFGSTR K TCE DK + +L+ A T VT+V KAWD V +LE +ENLAM+ ++V +R G+EVMLD EHF+DGYKA+ Y + AAV+A VDVLVLCDTNGGTLPWE+DEI V A +P VR+GIHCHND LAV+N++ AV +GA +VQGT+NG GERTGNANLM+I+PTLQLKMG V + L+ LT LSR+TDE+ +Q H P+ G S+FAHKGG+HV+AV K +YQHIDP VGN +R+LVSELSG+ NIL+K EE G+ E K W R+ VL+ VK LE KGY+FEGA+AS+ L++RRT+ GY PF+L+D+ V T D++ G + P
Sbjct: 22 GELRKQKKTVQIYDTTLRDGSQGEGISLTVPDKLKLAQRLDEFGAHYIEGGWPGSNPKDESFF--AQCKGLDNA--KLVAFGSTRYKGTTCEHDKNVQALMKADTPVVTLVGKAWDHQVSVVLEATLDENLAMISDTVAFFKRKGREVMLDAEHFYDGYKASPAYALSCLHAAVKAGVDVLVLCDTNGGTLPWEIDEITRVVVAEFPTVRIGIHCHNDMELAVSNTIAAVHAGATLVQGTINGFGERTGNANLMSIVPTLQLKMGHDCVGDRLQQLTDLSRYTDEITNQPHVPN-----------------RPYVGASSFAHKGGLHVAAVLKDENTYQHIDPVLVGNERRILVSELSGRRNILTKAEELGLHPADESKDGVEWNVRVKAVLEQVKELENKGYSFEGAEASLELMLRRTVHGYRPPFELLDFSVST-DNKRVVYGNVLNATP 451
BLAST of mRNA_H-paniculata_contig428.10951.1 vs. uniprot
Match: A0A7C5E488_9CHLR ((R)-citramalate synthase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C5E488_9CHLR) HSP 1 Score: 454 bits (1168), Expect = 1.160e-151 Identity = 242/426 (56.81%), Postives = 295/426 (69.25%), Query Frame = 3
Query: 330 LYDTTLRDGTQMEGISASVNDKLKIAKELHNFGMHYIEGGWPGSNPKDVEFFER-AHVELPDEAWAKVVAFGSTRRKHKTCEEDKQLASLIAAGTNCVTIVAKAWDLHVDDILEVPREENLAMVRESVDHLRRAGKEVMLDLEHFFDGYKANAEYTMQVCEAAVQANVDVLVLCDTNGGTLPWEVDEIIGDVKAAYPEVRLGIHCHNDQGLAVANSLQAVRSGADVVQGTVNGIGERTGNANLMTIIPTLQLKMGAQGVE-ENLRNLTALSRFTDELASQHTKRIFPSPAYMFFNMAPSSGAPFTGLSAFAHKGGIHVSAVNKISESYQHIDPAQVGNVKRVLVSELSGQSNILSKVEESGMASKAELKASDVWRERLGQVLKTVKTLEKKGYTFEGADASVNLLVRRTMSGYVAPFKLIDYLVQT 1601
LYDTTLRDGTQ EGIS S NDKLKIA++L FG HYIEGGWPGSNPKD EFF R ++L AK+ AFGSTR K+ TC++D + +L+ A T VT+V K+WDLHV ILE EENL M+ ESV + + GKEV+ D EHFFDGYKAN +Y + +AA+++ D +VLCDTNGG+ PWEV+EI V A + RLGIH HND L VAN+L VR GA VQGTVNG GER GNANL++IIP LQLKMG + V+ E L LTALSR+ DELA NM P+ PF G SAFAHKGGIHV+A+ K+ ESYQH+DP VGN KR +VSELSG+ NIL K E G+ D RE QVL+ +K LE +GYTFEGA+ASV++++RR SGY PF++ID++V T
Sbjct: 6 LYDTTLRDGTQGEGISLSCNDKLKIAQKLDEFGAHYIEGGWPGSNPKDAEFFARQGELKLKH---AKIAAFGSTRYKNTTCDKDANIQALVEANTPVVTLVGKSWDLHVRHILETDLEENLEMIAESVAYFKERGKEVIYDAEHFFDGYKANPDYALLTLQAAIKSGADCVVLCDTNGGSTPWEVEEITKQVAARFEGQRLGIHPHNDCELGVANALAGVRGGARHVQGTVNGYGERVGNANLISIIPDLQLKMGYECVKPEQLAGLTALSRYVDELA----------------NMTPNPHQPFVGYSAFAHKGGIHVAAILKVEESYQHMDPTVVGNEKRAVVSELSGRGNILYKAAERGL---------DTSREEARQVLEQIKELENQGYTFEGAEASVDMMLRRANSGYKPPFEVIDFMVIT 403
BLAST of mRNA_H-paniculata_contig428.10951.1 vs. uniprot
Match: A0A7S0G5Y8_9RHOD ((R)-citramalate synthase n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G5Y8_9RHOD) HSP 1 Score: 449 bits (1156), Expect = 1.500e-148 Identity = 253/472 (53.60%), Postives = 317/472 (67.16%), Query Frame = 3
Query: 279 ATVGFVGPK--KEGLRVVELYDTTLRDGTQMEGISASVNDKLKIAKELHNFGMHYIEGGWPGSNPKDVEFFERAH-VELPDEAWAKVVAFGSTRRKHKTCEEDKQLASLIAAGTNCVTIVAKAWDLHVDDILEVPREENLAMVRESVDHLRRAGKEVMLDLEHFFDGYKANAEYTMQVCEAAVQANVDVLVLCDTNGGTLPWEVDEIIGDVKAAYPEVRLGIHCHNDQGLAVANSLQAVRSGADVVQGTVNGIGERTGNANLMTIIPTLQLKMGAQGVEEN-LRNLTALSRFTDELASQHTKRIFPSPAYMFFNMAPSSGAPFTGLSAFAHKGGIHVSAVNKISESYQHIDPAQVGNVKRVLVSELSGQSNILSKVEESGMASKAELKASDVWRERLGQVLKTVKTLEKKGYTFEGADASVNLLVRRTMSGYVAPFKLIDYLVQTWDSEE-STRGTEFRSAPTTARATVKVR 1679
A+VG V + K V++YDTTLRDG+Q EGIS +V DKL+IA++L +FG+ YIEGGWPGSNPKD EFF ++L AK+ AFGSTR KH C ED + +LI A T VTIV KAWD+ V+ +LE EENLAM+ ESV +L++ GKEVMLD EHFFDGY AN Y MQ +AA A DV+VLCDTNGG+ PWE +I +V A R+GIH HND LAVANSL AVRSGA VVQGT NG GERTGNANLM+I+P LQLK+G + + +N L LT LSRF DE A N + PF G SAFAHKGG+HV+AV K +YQHIDP VGN KRVLVSELSG+ NI+ K ++ G+ E+ D W+ R +L+ +K LE GYTFEGA+ASV L++RR++ GY APF+L+D+ V + + +E R S +++ATVK+R
Sbjct: 51 ASVGCVDGEQAKSVTSFVDIYDTTLRDGSQGEGISLTVEDKLRIAQKLDDFGVSYIEGGWPGSNPKDAEFFTAMKDIKLKS---AKLCAFGSTRYKHVACGEDANIRALIEAQTPVVTIVGKAWDMQVEVVLEASLEENLAMISESVTYLKKRGKEVMLDAEHFFDGYLANPAYAMQCLDAAADAGADVVVLCDTNGGSSPWETGQITFEV-ARRVACRVGIHAHNDMELAVANSLAAVRSGATVVQGTANGYGERTGNANLMSIMPALQLKLGYKCLSKNSLGGLTELSRFIDEQA----------------NRPHVTSRPFVGSSAFAHKGGLHVAAVMKNENTYQHIDPKAVGNQKRVLVSELSGRGNIVQKAQDLGLLKSGEV-VDDAWKRRSKTILQRIKELENLGYTFEGAEASVELMIRRSLPGYEAPFELVDFTVVSGNKKEMDARDLIPFSESQSSQATVKMR 501
BLAST of mRNA_H-paniculata_contig428.10951.1 vs. uniprot
Match: A0A3M1GUB2_9CHLR ((R)-citramalate synthase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1GUB2_9CHLR) HSP 1 Score: 446 bits (1147), Expect = 2.060e-148 Identity = 229/426 (53.76%), Postives = 290/426 (68.08%), Query Frame = 3
Query: 330 LYDTTLRDGTQMEGISASVNDKLKIAKELHNFGMHYIEGGWPGSNPKDVEFFER-AHVELPDEAWAKVVAFGSTRRKHKTCEEDKQLASLIAAGTNCVTIVAKAWDLHVDDILEVPREENLAMVRESVDHLRRAGKEVMLDLEHFFDGYKANAEYTMQVCEAAVQANVDVLVLCDTNGGTLPWEVDEIIGDVKAAYPEVRLGIHCHNDQGLAVANSLQAVRSGADVVQGTVNGIGERTGNANLMTIIPTLQLKMGAQGV-EENLRNLTALSRFTDELASQHTKRIFPSPAYMFFNMAPSSGAPFTGLSAFAHKGGIHVSAVNKISESYQHIDPAQVGNVKRVLVSELSGQSNILSKVEESGMASKAELKASDVWRERLGQVLKTVKTLEKKGYTFEGADASVNLLVRRTMSGYVAPFKLIDYLVQT 1601
+YDTTLRDGTQ EGIS S NDKLKIAK+L FG+HYIEGGWPGSNPKD EFF R + L AK+ AFGSTR K TC+ D + +L+AA T VT+ K+WDLHV +LE EENL M+ ESV + + GKEV+ D EHFFDGYKAN EY M +AAV D LVLCDTNGGT+PWEV+EI V+ +PEV++GIH HND L VAN+L VR GA +QGTVNG GER GNANL++IIP LQ+KMG + V +E L LT L+ + DE+A N+ P+S P+ G SAFAHKGG+H +A+ K+ ESYQHIDP+ VGN +R +VSEL+G+ NIL E G+ + +E Q+++ +K LE +GY FEGA+ASV +++RR GY PF++ID++V T
Sbjct: 6 IYDTTLRDGTQGEGISLSCNDKLKIAKKLDEFGVHYIEGGWPGSNPKDAEFFARQGELNLKH---AKIAAFGSTRYKGNTCDNDPNIQALLAANTPVVTLFGKSWDLHVTHVLETDLEENLDMILESVRYFKNRGKEVIYDAEHFFDGYKANPEYAMLTLKAAVNGGADCLVLCDTNGGTMPWEVEEITATVQKQFPEVQIGIHAHNDAELGVANTLAGVRGGAVHIQGTVNGYGERVGNANLVSIIPDLQIKMGYRCVSDEQLAKLTELAHYVDEIA----------------NLTPNSHQPYVGQSAFAHKGGVHAAAIRKVEESYQHIDPSLVGNRRRTIVSELAGRGNILDMAEALGLKTT---------KEEARQIVQQIKDLEAEGYAFEGAEASVQMMIRRASEGYKPPFEVIDFMVVT 403
BLAST of mRNA_H-paniculata_contig428.10951.1 vs. uniprot
Match: A0A3M1EAS4_9CHLR ((R)-citramalate synthase n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1EAS4_9CHLR) HSP 1 Score: 440 bits (1132), Expect = 3.100e-146 Identity = 241/456 (52.85%), Postives = 298/456 (65.35%), Query Frame = 3
Query: 315 LRVVELYDTTLRDGTQMEGISASVNDKLKIAKELHNFGMHYIEGGWPGSNPKDVEFFERAHVELPDEAWAKVVAFGSTRRKHKTCEEDKQLASLIAAGTNCVTIVAKAWDLHVDDILEVPREENLAMVRESVDHLRRAGKEVMLDLEHFFDGYKANAEYTMQVCEAAVQANVDVLVLCDTNGGTLPWEVDEIIGDVKAAYPEVRLGIHCHNDQGLAVANSLQAVRSGADVVQGTVNGIGERTGNANLMTIIPTLQLKMGAQGVE-ENLRNLTALSRFTDELASQHTKRIFPSPAYMFFNMAPSSGAPFTGLSAFAHKGGIHVSAVNKISESYQHIDPAQVGNVKRVLVSELSGQSNILSKVEESGMASKAELKASDVWRERLGQVLKTVKTLEKKGYTFEGADASVNLLVRRTMSGYVAPFKLIDYLVQTWDSEESTRGTEFRSAPTTARATVKVR 1679
+ + LYDTTLRDGTQ EGIS S +DKLKIA+ L FG+HYIEGGWPGSNPKD EFFER V+ + AK+ AFGSTR K+ CEED + +L+ A T VT+V K+WDLHVD +LE R+ENLAM+ +SV + +R GKEV+ D EHFFDGYKAN +Y +Q AA +A D +VLCDTNGG LPWEV I+ V+ A + LGIH H+D G VANSL AV++G VQGT+NG GER NANL TIIP LQLKMG V E LR LT+LSRF E A N+ P P+ G SAFAHKGGIHV+A+ K E+YQHIDP VGN KR +VSELSG+ N+L + +E G+ D+ E +++ +K LE +G+TFE A+ASV LL+ R GY PF+L+D++V E G E A ATVKVR
Sbjct: 1 MTTIYLYDTTLRDGTQREGISLSCDDKLKIARRLDEFGIHYIEGGWPGSNPKDAEFFER--VKSLNLKQAKIAAFGSTRYKNTPCEEDANIRALVEADTPVVTLVGKSWDLHVDVVLEADRDENLAMIADSVAYFKRMGKEVIYDAEHFFDGYKANPDYALQTIRAAAEAGADCVVLCDTNGGALPWEVHRIVDAVREAV-DAPLGIHTHDDGGCGVANSLVAVQAGCVQVQGTINGYGERVANANLTTIIPNLQLKMGIPVVTPEQLRELTSLSRFVAETA----------------NLPPDDHQPYVGRSAFAHKGGIHVAAILKAEETYQHIDPTLVGNQKRAVVSELSGRGNLLFQAQERGL---------DISSESAKAIVRQIKELEHEGFTFEAAEASVELLLHRARPGYTPPFELVDFMVVV----EHRAGRELL-----AEATVKVR 419 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig428.10951.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig428.10951.1 >prot_H-paniculata_contig428.10951.1 ID=prot_H-paniculata_contig428.10951.1|Name=mRNA_H-paniculata_contig428.10951.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=537bp MRLWKTSLVFCHMTPSLSFLSPVALRDVTVRSKVGVQQMVAATSTTLTKLback to top mRNA from alignment at H-paniculata_contig428:27728..35832+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig428.10951.1 ID=mRNA_H-paniculata_contig428.10951.1|Name=mRNA_H-paniculata_contig428.10951.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8105bp|location=Sequence derived from alignment at H-paniculata_contig428:27728..35832+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig428:27728..35832+ >mRNA_H-paniculata_contig428.10951.1 ID=mRNA_H-paniculata_contig428.10951.1|Name=mRNA_H-paniculata_contig428.10951.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3222bp|location=Sequence derived from alignment at H-paniculata_contig428:27728..35832+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |