mRNA_H-paniculata_contig428.10949.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig428.10949.1 vs. uniprot
Match: D7FMZ6_ECTSI (NnrU domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMZ6_ECTSI) HSP 1 Score: 528 bits (1361), Expect = 1.640e-183 Identity = 254/302 (84.11%), Postives = 277/302 (91.72%), Query Frame = 3
Query: 537 RGSSTVRPLAMSVSEVEGLQRDSGLIGEDSAVFSFEDQSLKSWSAFLAVLGTVLTALYYLWLNPDTGYGDDFVRVLEGVTGGDTTITVSLILAIFAVAHSGLASLRPKGEEMIGARAWRVLFGVVSLPLAVSAVVYFINHRYDGVQLWDIKMVPGVHSACWITSFISFLFLYPSTFNLLEVAAVDKPQLHMWETGVMRITRHPQTVGQAMWCAAHLAWVGTSFTAVTSAALMAHHVFSLWNGDRRLKDKYGDEFEAVQERTSIVPFQASGQIIIHAVWEGRQKLPSDYWKEFARGPYLIIVG 1442
RGSS V PLAMS SE+E LQR SGL+GED+AVFSFE+QSLKSW AFLAVLGTVLTALYYLWL P+TGYGDDFVR LEG++GGD+TITV+LIL +FAVAHSGLASLRPKGEE+IGARAWRVLFGVVSLPLAV+AV YFINHRYDGVQLW+IKMVPGVH ACWITSFISF+FLYPSTFNLLEVAAVDKPQLH+WETGV RITRHPQT GQA+WCAAHLAWVGTSFTAVTSA LMAHH+FSLWNGDRRLK+KYGD+FEAV+ERTS VPFQA ++EGRQ+LPSDYWKEFARGPY II G
Sbjct: 8 RGSS-VNPLAMSASELEDLQRQSGLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPETGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELIGARAWRVLFGVVSLPLAVTAVAYFINHRYDGVQLWNIKMVPGVHDACWITSFISFVFLYPSTFNLLEVAAVDKPQLHLWETGVTRITRHPQTFGQALWCAAHLAWVGTSFTAVTSAGLMAHHLFSLWNGDRRLKEKYGDDFEAVRERTSAVPFQA--------IFEGRQQLPSDYWKEFARGPYFIIAG 300
BLAST of mRNA_H-paniculata_contig428.10949.1 vs. uniprot
Match: A0A835Z2B9_9STRA (NnrU protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2B9_9STRA) HSP 1 Score: 487 bits (1254), Expect = 4.880e-167 Identity = 231/347 (66.57%), Postives = 271/347 (78.10%), Query Frame = 3
Query: 465 AGTEQGSFGIVHMRQPNYSICRSCRGSSTVRPLAMSVSEVEGLQRDSGLIGEDSAVFSFEDQSLKSWSAFLAVLGTVLTALYYLWLNPDTGYGDDFVRVLEGVTGGDTTITVSLILAIFAVAHSGLASLRPKGEEMIGARAWRVLFGVVSLPLAVSAVVYFINHRYDGVQLWDIKMVPGVHSACWITSFISFLFLYPSTFNLLEVAAVDKPQLHMWETGVMRITRHPQTVGQAMWCAAHLAWVGTSFTAVTSAALMAHHVFSLWNGDRRLKDKYGDEFEAVQERTSIVPFQASGQIIIHAVWEGRQKLPSDYWKEFARGPYLIIVGGTIGAYFAHPFLQAGSWALHW 1505
AGT GS H + + S ST L +S ++E LQ SGLIGED+A FS ++Q L SW +F V V+ AL+YLW+N TGYGDDF+R LE V+GG++++T+ L+L IFAVAHSGLASLRPKGEE+IGARAWRVLFGVVSLPLA+S +VYFINHRYDGV LW++K VPGVH CWI+SFISF FLYPSTFNLLEVAAVDKPQLHMWETGVMRITRHPQ VGQ +WC AH WVGTSFT +TSA LM HH+F++WNGDRRL DKYG+ FE V+ RTS++PFQA V EGRQKLP+DYWKE+ARGPY II GT+GAY+ HPF+QAGSW LHW
Sbjct: 27 AGTRYGSLVQRHAGAKSAFMHSSDIRRSTSSALQLSTRDIEELQDASGLIGEDAAAFSLQEQKLASWISFGGVFTVVMAALWYLWINESTGYGDDFIRALESVSGGNSSVTIVLLLGIFAVAHSGLASLRPKGEEIIGARAWRVLFGVVSLPLALSCLVYFINHRYDGVALWNLKGVPGVHDFCWISSFISFFFLYPSTFNLLEVAAVDKPQLHMWETGVMRITRHPQFVGQGIWCLAHALWVGTSFTLLTSAMLMGHHLFAVWNGDRRLADKYGEAFEKVKARTSVMPFQA--------VIEGRQKLPADYWKEWARGPYAIIAAGTVGAYYLHPFMQAGSWTLHW 365
BLAST of mRNA_H-paniculata_contig428.10949.1 vs. uniprot
Match: A0A7S4G126_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G126_9EUGL) HSP 1 Score: 422 bits (1084), Expect = 7.930e-140 Identity = 195/297 (65.66%), Postives = 232/297 (78.11%), Query Frame = 3
Query: 615 GEDSAVFSFEDQSLKSWSAFLAVLGTVLTALYYLWLNPDTGYGDDFVRVLEGVTGGDTTITVSLILAIFAVAHSGLASLRPKGEEMIGARAWRVLFGVVSLPLAVSAVVYFINHRYDGVQLWDIKMVPGVHSACWITSFISFLFLYPSTFNLLEVAAVDKPQLHMWETGVMRITRHPQTVGQAMWCAAHLAWVGTSFTAVTSAALMAHHVFSLWNGDRRLKDKYGDEFEAVQERTSIVPFQASGQIIIHAVWEGRQKLPSDYWKEFARGPYLIIVGGTIGAYFAHPFLQAGSWALHW 1505
GED+A F+ DQ + W F+AVL TVL L+ +W+ P TG D+FV LEG+ GG+T T+ LIL IF +AHSGLA LRPKGE +IG RA+RVLFG+VSLPLA+ A+VYFINHRYDG LWDIK VPGVHSA WI +FISF+FLYPSTFNLLE+AAV+KP+LHMWETG+MRITRHPQ VGQ +WC AH AW+G+SF VTS LMAHH F +W+GDRRL KYG+ FE V+ RTSI PF A + +GRQ+LP DYW EFARGPYL IV GT+GAYFAHP +Q GS++LHW
Sbjct: 178 GEDAAAFTLSDQRTEDWVKFVAVLVTVLGGLFVVWIYPPTGLADEFVDALEGLMGGNTEATMMLILVIFGIAHSGLAGLRPKGEAIIGERAYRVLFGLVSLPLAILALVYFINHRYDGTLLWDIKGVPGVHSAVWILTFISFIFLYPSTFNLLEIAAVEKPKLHMWETGIMRITRHPQFVGQGLWCIAHTAWIGSSFAVVTSIGLMAHHTFGVWHGDRRLFAKYGEAFEEVKARTSIWPFAA--------ILDGRQQLPKDYWLEFARGPYLAIVVGTVGAYFAHPLMQLGSYSLHW 466
BLAST of mRNA_H-paniculata_contig428.10949.1 vs. uniprot
Match: A0A8J4AM61_9CHLO (NnrU domain-containing protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4AM61_9CHLO) HSP 1 Score: 416 bits (1068), Expect = 6.070e-139 Identity = 189/299 (63.21%), Postives = 234/299 (78.26%), Query Frame = 3
Query: 609 LIGEDSAVFSFEDQSLKSWSAFLAVLGTVLTALYYLWLNPDTGYGDDFVRVLEGVTGGDTTITVSLILAIFAVAHSGLASLRPKGEEMIGARAWRVLFGVVSLPLAVSAVVYFINHRYDGVQLWDIKMVPGVHSACWITSFISFLFLYPSTFNLLEVAAVDKPQLHMWETGVMRITRHPQTVGQAMWCAAHLAWVGTSFTAVTSAALMAHHVFSLWNGDRRLKDKYGDEFEAVQERTSIVPFQASGQIIIHAVWEGRQKLPSDYWKEFARGPYLIIVGGTIGAYFAHPFLQAGSWALHW 1505
+IGED+AVF E Q++KSW+ F +L TVL ALY +W+ P G DD++ ++ + G + IT++LIL FA+AHSGLA LRP GEE+IGARA+RV+F +VSLPLA+ A+VYFINHRYDGV LWD++ VPGVH W+ +FISF FLYPSTFN+LEVAAVDKP+LH+WETG+MRITRHPQ VGQA+WCAAH W+G+SF VTSA LMAHH+F W+GDRRLK KYGD FEAV+ RTS+VPF A + +GRQKLP+DYWKEFAR PY + TIGAY AHP +QA S++L W
Sbjct: 73 MIGEDAAVFDIEKQNIKSWALFTVLLSTVLGALYLVWIQPGVGLADDYLAAIQSIAGS-SEITITLILLFFAIAHSGLAGLRPYGEEVIGARAYRVIFALVSLPLAIVAIVYFINHRYDGVPLWDVRGVPGVHELVWVLNFISFWFLYPSTFNILEVAAVDKPKLHLWETGIMRITRHPQMVGQAIWCAAHTMWIGSSFMVVTSACLMAHHLFGCWHGDRRLKAKYGDAFEAVKARTSVVPFAA--------ILDGRQKLPADYWKEFARMPYFTVTALTIGAYLAHPLMQAASFSLKW 362
BLAST of mRNA_H-paniculata_contig428.10949.1 vs. uniprot
Match: A0A7S3YAC1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAC1_HETAK) HSP 1 Score: 414 bits (1063), Expect = 4.720e-138 Identity = 182/299 (60.87%), Postives = 231/299 (77.26%), Query Frame = 3
Query: 609 LIGEDSAVFSFEDQSLKSWSAFLAVLGTVLTALYYLWLNPDTGYGDDFVRVLEGVTGGDTTITVSLILAIFAVAHSGLASLRPKGEEMIGARAWRVLFGVVSLPLAVSAVVYFINHRYDGVQLWDIKMVPGVHSACWITSFISFLFLYPSTFNLLEVAAVDKPQLHMWETGVMRITRHPQTVGQAMWCAAHLAWVGTSFTAVTSAALMAHHVFSLWNGDRRLKDKYGDEFEAVQERTSIVPFQASGQIIIHAVWEGRQKLPSDYWKEFARGPYLIIVGGTIGAYFAHPFLQAGSWALHW 1505
L+GED+AVF F +Q ++SW F ++ +VL LY W+ DTG+GDD++R+LE + GGD+ + + ++L IF V HSGLASLR KGE +IGARAWRVLF + SLPLA+SAVVYFINHRYDG LW ++ PG+H CW SF+SFLFLYPSTFNLLEVAAVD+P+ H+WETGV R+TRHPQ VGQ +WC AH WVGTSF V +A LMAHH+F+ W+GDRRL++++GD F V+ERTSI+PFQA + EGRQ+LP DY+KEF RGPYLI+ T+GAYFAHP++QA S+ W
Sbjct: 81 LVGEDAAVFEFSNQKIQSWGIFSVLVTSVLGLLYVTWIKADTGFGDDYIRLLESIAGGDSHVVMGMLLTIFGVVHSGLASLRTKGESIIGARAWRVLFALASLPLALSAVVYFINHRYDGALLWSLRDFPGMHGLCWALSFVSFLFLYPSTFNLLEVAAVDRPEQHLWETGVARVTRHPQAVGQGLWCLAHTLWVGTSFMCVATAGLMAHHLFACWHGDRRLEERHGDAFRRVKERTSIMPFQA--------ILEGRQQLPQDYYKEFLRGPYLIVTVATVGAYFAHPYMQAYSYLTQW 371
BLAST of mRNA_H-paniculata_contig428.10949.1 vs. uniprot
Match: A0A835XZY9_9CHLO (NnrU domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XZY9_9CHLO) HSP 1 Score: 402 bits (1034), Expect = 7.710e-134 Identity = 192/326 (58.90%), Postives = 244/326 (74.85%), Query Frame = 3
Query: 534 CRGSSTVRPLAMSVSEVEGLQRDSG--LIGEDSAVFSFEDQSLKSWSAFLAVLGTVLTALYYLWLNPDTGYGDDFVRVLEGVTGGDTTITVSLILAIFAVAHSGLASLRPKGEEMIGARAWRVLFGVVSLPLAVSAVVYFINHRYDGVQLWDIKMVPGVHSACWITSFISFLFLYPSTFNLLEVAAVDKPQLHMWETGVMRITRHPQTVGQAMWCAAHLAWVGTSFTAVTSAALMAHHVFSLWNGDRRLKDKYGDEFEAVQERTSIVPFQASGQIIIHAVWEGRQKLPSDYWKEFARGPYLIIVGGTIGAYFAHPFLQAGSWALHW 1505
CR +S+ R +A + SE + S L+GEDSA F QSL+SW F +L TVL ALY +W+ P G+ DD++ LE T G+ T++LIL +FA+AHSGLA LRP GE++IGARA+RV+F +VSLPLA+ ++VYFINHRYDGV LWD++ VPGVHS WI +FISF FLYPSTFN+LEVAAVD+P+LH+WETG+MRITRHPQ VGQ +WCAAH WVG+S V SA LMAHH+F W+GDRRLK KYGD FEAV+ RTS++PF A + +GRQ+LP+DYWKEF R PY+ I T+GAY+AHP +Q+ ++ LHW
Sbjct: 45 CRPTSS-RVVARASSETDASTSASTAPLVGEDSAAFDLSKQSLQSWGLFTVLLSTVLGALYLVWIQP-AGFADDYLAALESWTSGNPEATMALILLVFAIAHSGLAGLRPYGEKVIGARAYRVIFALVSLPLALVSIVYFINHRYDGVALWDVRDVPGVHSLVWIVNFISFYFLYPSTFNILEVAAVDEPKLHLWETGIMRITRHPQMVGQGLWCAAHTLWVGSSVMLVASAGLMAHHLFGCWHGDRRLKAKYGDAFEAVKARTSVLPFAA--------IADGRQQLPADYWKEFLRMPYVAITILTLGAYWAHPIMQSAAFNLHW 360
BLAST of mRNA_H-paniculata_contig428.10949.1 vs. uniprot
Match: A0A2K1L979_PHYPA (NnrU domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L979_PHYPA) HSP 1 Score: 403 bits (1036), Expect = 1.190e-133 Identity = 186/309 (60.19%), Postives = 230/309 (74.43%), Query Frame = 3
Query: 579 EVEGLQRDSGLIGEDSAVFSFEDQSLKSWSAFLAVLGTVLTALYYLWLNPDTGYGDDFVRVLEGVTGGDTTITVSLILAIFAVAHSGLASLRPKGEEMIGARAWRVLFGVVSLPLAVSAVVYFINHRYDGVQLWDIKMVPGVHSACWITSFISFLFLYPSTFNLLEVAAVDKPQLHMWETGVMRITRHPQTVGQAMWCAAHLAWVGTSFTAVTSAALMAHHVFSLWNGDRRLKDKYGDEFEAVQERTSIVPFQASGQIIIHAVWEGRQKLPSDYWKEFARGPYLIIVGGTIGAYFAHPFLQAGSWALHW 1505
+ EG L+GED+AVF+ + Q SW F VLGTVL LYY+WL+P+TGYG F+ L ++ + ++ ILA+FA+ HSGLA LR GE+++G RA+RV F +SLPLAVSAVVYFINHRYDGVQLW ++ +PGVH A W SFISF FLYPSTFNLLEVAAVDKP++HMWETG+MRITRHPQ VGQ +WC AH W+G+SFT TS L+AHH+F +W+GDRRL KYG+ FE V+ERTSI+PF A + +GRQKLP DY+KEF R PY +IVG T+GAYF+HP +Q GS LHW
Sbjct: 94 DFEGDIEQPVLVGEDAAVFNVKSQKATSWIYFFLVLGTVLAILYYIWLDPNTGYGGAFIDALSSLSSNHEIVMLA-ILAVFALVHSGLAGLRASGEKLVGERAYRVFFAGISLPLAVSAVVYFINHRYDGVQLWQVRTIPGVHEAVWALSFISFFFLYPSTFNLLEVAAVDKPKVHMWETGIMRITRHPQMVGQFIWCLAHTLWIGSSFTLTTSFGLLAHHLFGVWHGDRRLSAKYGEAFERVKERTSIIPFAA--------ILDGRQKLPEDYYKEFLRVPYYVIVGFTLGAYFSHPLMQLGSHILHW 393
BLAST of mRNA_H-paniculata_contig428.10949.1 vs. uniprot
Match: A0A0G4ECX7_VITBC (NnrU domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ECX7_VITBC) HSP 1 Score: 402 bits (1032), Expect = 1.710e-133 Identity = 183/296 (61.82%), Postives = 228/296 (77.03%), Query Frame = 3
Query: 606 GLIGEDSAVFSFEDQSLKSWSAFLAVLGTVLTALYYLWLNPDTGYGDDFVRVLEGVTGGDTTITVSLILAIFAVAHSGLASLRPKGEEMIGARAWRVLFGVVSLPLAVSAVVYFINHRYDGVQLWDIKMVPGVHSACWITSFISFLFLYPSTFNLLEVAAVDKPQLHMWETGVMRITRHPQTVGQAMWCAAHLAWVGTSFTAVTSAALMAHHVFSLWNGDRRLKDKYGDEFEAVQERTSIVPFQASGQIIIHAVWEGRQKLPSDYWKEFARGPYLIIVGGTIGAYFAHPFLQAGSW 1493
G +GED+A F E+QSLKSW F +L TVL ALY W++P+TG+G D++R+LE T + ++ ++ IFAVAHSGLASLRP+ E +IGARAWRV+F ++SLPLA SA+ YFINHRYDGVQLWD++ VPGVH W S +SF FLYPSTFNLLEVAAVDKPQLH+WE+GVMRITRHPQ VGQ +WC AH W+G SFT TS LMAHH+F +W+GD+RL+ KYG+ F+ VQ RTS+VPF A V +GRQ+LP DYWKEF R PY +++ T+GAY+AHPF+QA SW
Sbjct: 71 GFVGEDAARFDLEEQSLKSWGIFSVLLVTVLGALYVSWISPETGFGKDYLRLLES-TSDSPEVVMTELMGIFAVAHSGLASLRPRMEGIIGARAWRVVFALMSLPLAFSAIAYFINHRYDGVQLWDLRNVPGVHEVVWGLSLVSFFFLYPSTFNLLEVAAVDKPQLHLWESGVMRITRHPQMVGQGLWCLAHTLWIGNSFTLWTSVLLMAHHLFGVWHGDQRLRAKYGEAFDQVQRRTSVVPFAA--------VIDGRQRLPDDYWKEFVRLPYAVVLAATLGAYWAHPFMQAYSW 357
BLAST of mRNA_H-paniculata_contig428.10949.1 vs. uniprot
Match: L1K1I3_GUITC (NnrU domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1K1I3_GUITC) HSP 1 Score: 394 bits (1011), Expect = 3.270e-131 Identity = 178/308 (57.79%), Postives = 223/308 (72.40%), Query Frame = 3
Query: 609 LIGEDSAVFSFEDQSLKSWSAFLAVLGTVLTALYYLWLNPDTGYGDDFVRVLEGVTGGDTTITVSLILAIFAVAHSGLASLRPKGE---------EMIGARAWRVLFGVVSLPLAVSAVVYFINHRYDGVQLWDIKMVPGVHSACWITSFISFLFLYPSTFNLLEVAAVDKPQLHMWETGVMRITRHPQTVGQAMWCAAHLAWVGTSFTAVTSAALMAHHVFSLWNGDRRLKDKYGDEFEAVQERTSIVPFQASGQIIIHAVWEGRQKLPSDYWKEFARGPYLIIVGGTIGAYFAHPFLQAGSWALHW 1505
L GEDS F QS+ SW+ F+ V V+ AL++LW++P TG+GDDF+R+L + ++T T+ L+L++F VAHSGLASLRPK E E +G R WRVLFGVVSLPLAVS +V+FINHRYDGVQLWD++ VH+ CW+ +F+SF FLYPSTFNLLE+AAVDKP+ HMWETG+MRITRHPQ VGQ MWC AH W+G SF TS LM HH+F W+GD+RL +KYG+ FEAV+ RTS++PF A + EGRQ LP DY+KEF R PY+ I GT+ AYFAHP +Q S+ L W
Sbjct: 5 LRGEDSGAFDLSAQSIASWAKFVGVFTVVMGALWFLWIDPQTGFGDDFIRLLSSICSDNSTATMLLLLSVFGVAHSGLASLRPKAEAAINSLLEQEGVGERVWRVLFGVVSLPLAVSCIVFFINHRYDGVQLWDVRSSDAVHAMCWVVNFVSFWFLYPSTFNLLEIAAVDKPKFHMWETGIMRITRHPQMVGQLMWCMAHTLWIGNSFMLATSFGLMVHHLFGCWHGDQRLANKYGEAFEAVKSRTSVLPFAA--------IAEGRQTLPEDYYKEFLRAPYVAITVGTVAAYFAHPLMQGYSYLLKW 304
BLAST of mRNA_H-paniculata_contig428.10949.1 vs. uniprot
Match: A0A7S3VSM6_DUNTE (Hypothetical protein n=2 Tax=Dunaliella TaxID=3044 RepID=A0A7S3VSM6_DUNTE) HSP 1 Score: 396 bits (1018), Expect = 3.700e-131 Identity = 179/307 (58.31%), Postives = 225/307 (73.29%), Query Frame = 3
Query: 585 EGLQRDSGLIGEDSAVFSFEDQSLKSWSAFLAVLGTVLTALYYLWLNPDTGYGDDFVRVLEGVTGGDTTITVSLILAIFAVAHSGLASLRPKGEEMIGARAWRVLFGVVSLPLAVSAVVYFINHRYDGVQLWDIKMVPGVHSACWITSFISFLFLYPSTFNLLEVAAVDKPQLHMWETGVMRITRHPQTVGQAMWCAAHLAWVGTSFTAVTSAALMAHHVFSLWNGDRRLKDKYGDEFEAVQERTSIVPFQASGQIIIHAVWEGRQKLPSDYWKEFARGPYLIIVGGTIGAYFAHPFLQAGSWALHW 1505
E R +GL+GED+A F QS KSW+ F +L VL +Y +W+ P G DDF+ ++EG + + T+ LIL +FAV HSGLA LRPKGE++IGARA+RV+F +VSLPLA+ A+VYFINHRYDG+ LWD++ V GVH W+ +F+SF FLYPSTFN+LEVAAVD+P+LHMWETG+MRITRHPQ VGQ +WCAAH W+G SF VTSA LMAHH+F W+GDRRL KYG+ FE V+ RTS P QA +WEGRQ LP+DY+KEF R PY + T+GAYFAHP +Q+ S+ L W
Sbjct: 80 EESPRPAGLVGEDAAAFDVSQQSTKSWALFTGLLTGVLGLIYLVWIQPGAGLADDFLGLVEGFSNNNPEATILLILFVFAVVHSGLAGLRPKGEQLIGARAYRVIFALVSLPLAIVAIVYFINHRYDGMPLWDLRGVTGVHELVWLLNFVSFYFLYPSTFNILEVAAVDEPKLHMWETGIMRITRHPQMVGQLIWCAAHTLWIGNSFMLVTSAGLMAHHLFGCWHGDRRLSAKYGEAFEIVKARTSTFPLQA--------IWEGRQVLPADYYKEFLRAPYFAVTAFTLGAYFAHPIMQSASFYLRW 378 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig428.10949.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig428.10949.1 >prot_H-paniculata_contig428.10949.1 ID=prot_H-paniculata_contig428.10949.1|Name=mRNA_H-paniculata_contig428.10949.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=407bp MRGSNGGPTTVAWGLLLLLVTPCSSFLFSAPAPGARPHTPSSVRGFGLRIback to top mRNA from alignment at H-paniculata_contig428:11790..17430- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig428.10949.1 ID=mRNA_H-paniculata_contig428.10949.1|Name=mRNA_H-paniculata_contig428.10949.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5641bp|location=Sequence derived from alignment at H-paniculata_contig428:11790..17430- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig428:11790..17430- >mRNA_H-paniculata_contig428.10949.1 ID=mRNA_H-paniculata_contig428.10949.1|Name=mRNA_H-paniculata_contig428.10949.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2442bp|location=Sequence derived from alignment at H-paniculata_contig428:11790..17430- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |