prot_H-paniculata_contig428.10948.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig428.10948.1
Unique Nameprot_H-paniculata_contig428.10948.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length349
Homology
BLAST of mRNA_H-paniculata_contig428.10948.1 vs. uniprot
Match: D7FMZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMZ7_ECTSI)

HSP 1 Score: 354 bits (909), Expect = 1.710e-119
Identity = 171/264 (64.77%), Postives = 213/264 (80.68%), Query Frame = 0
Query:   85 MGTEEVEDFEVDVELDTDGLDIFGTIITQVKMEGRVPASSHLVYDCSHGEWLLAQMAYDRKIRYFSSKSVKQLGTIAPLLPDNSRFIFSGALIPKQVKRLVKTKGVSAVVVRDVEGPVALSEALYEERDLLSDKVLSKVSQSRERFLLERGGDDRRANQEGPMATVAEGLHVFMRIEKGQQAPEVVETILEINKRCGNLSVVGLWGGDLKEDACLQLLEEVRAKSGITDLRVALDHKGPSSAKWFKDLSSKRRGPIMWTFEYDL 348
            MGTEEVEDFE+D+E+DT+ L++FGTIIT+VKMEGRVPASSHLVYDCSHGEWLLAQMAYDRKIR FSS+SV+QL +I+  LPDNSRFIFSGALIPKQ+KR++K KG+SAVV RD E  VA+ E++  ER  L+ K LS++SQSRER+LLE+GG +  ANQ GP+ ++  GL  F+RI++GQ   +V E +  I + C N+SVVGLWGGD+  + CL +LE VR KSGI++LRVA++H GP SA WF  L   RRGPIMWTF Y+L
Sbjct:    1 MGTEEVEDFEIDMEVDTEKLEVFGTIITEVKMEGRVPASSHLVYDCSHGEWLLAQMAYDRKIRLFSSRSVRQLLSISSSLPDNSRFIFSGALIPKQIKRILKMKGLSAVVARDAESVVAMEESIDAERKRLAAKGLSRISQSRERYLLEKGGGENGANQRGPVGSLVSGLRTFVRIQEGQSVDDVAEIVNTIEQTCRNISVVGLWGGDMDPETCLNMLEAVRTKSGISNLRVAMEHLGPKSAGWFTGLRGARRGPIMWTFNYEL 264          
BLAST of mRNA_H-paniculata_contig428.10948.1 vs. uniprot
Match: A0A836CMK3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMK3_9STRA)

HSP 1 Score: 196 bits (498), Expect = 4.670e-57
Identity = 112/264 (42.42%), Postives = 166/264 (62.88%), Query Frame = 0
Query:   87 TEEVEDFEVDVELDTDGLDIFGTIITQVKMEGRVPASSHLVYDCSHGEWLLAQMAYDRKIRYFSSKSVKQLGTIAPLLPDNSRFIFSGALIPKQVKRLVKTKGVSAVVVRDVEGPVALSEALYEERDLLSDKVLSKVSQSRERFLLERGGDDRRANQEGPMATVAEGLHVFMRI--EKGQQAPEVVETILEINKRCGNLSVVGLWGGDLKEDACLQLLEEVRAKSGITDLRVALDHKG-PSSAKWFKDLSSKRRGPIMWTFEYD 347
            +EEVE F+VD ++D   LD   T IT VK +G VPASS++VYDC+HG+WLL Q+AYDRKI+ F+S+S   +  +A ++PD+++ +F+GA +PK  KRL+K + + +VVV D     ALS+A+ +ER  L+ K LSKVS++RER+L   GG    A    P   V E + VF+++  E    A  V  T+ E+ + C  + V+GLWG   +      LL+EV+A      L+V L ++G   S KW + L  + RG I+WTFE++
Sbjct:   39 SEEVESFDVDFDIDR--LDAMNTYITDVKQKGYVPASSNIVYDCTHGQWLLMQVAYDRKIKLFASRSAAGVADLAAIVPDDAQVLFTGAFLPKHAKRLLKLRNLHSVVVPDAAAARALSDAMADERARLAAKGLSKVSRARERYLTAGGG----AQLAPPDTAVLERIRVFLKLPEEGSTTAAAVAATLAEVREGCPGVEVMGLWG---EGRGAYALLQEVKAAVNAPKLKVTLPYRGVEESFKWNQGLG-EGRGSIIWTFEFE 292          
BLAST of mRNA_H-paniculata_contig428.10948.1 vs. uniprot
Match: A0A6V1VHY5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VHY5_HETAK)

HSP 1 Score: 81.6 bits (200), Expect = 9.420e-14
Identity = 73/268 (27.24%), Postives = 120/268 (44.78%), Query Frame = 0
Query:   91 EDFEVDVELDTDGLDIFGTIITQVKMEGRVPASSHLVYDCSHGEWLLAQMAYDRKIRYFSSKSVKQLGTIAPLLPD--NSRFIFSGALIPKQVKRLVKTKGVSAVVVRDVEGPVALSEALYEERDLLSDKVLSKVSQSRERFLLERGGDDRRANQEGPMATVAEGLHVFMRIEKGQQ---APEVVETILEINKRCGNLSVVGLWGGDLKEDACLQLLEEVRAKSGITD-----------LRVALDHKGPSSAKWFKDLSSKRRGPIMW 342
            + FE+D+  D D +++F   IT +K   +   ++ +  +C+  EW+ AQ+A DR I  F S+S   L   A   PD  ++  + +G ++ KQVKRL K   V+ + V + E    LS+ L  E      K  SKVS SR+++L  + GD R            E  +  +RI   QQ     ++++ I  I K C NL+  G+          L  +E +     I D            ++A+       A ++KD  +  R   +W
Sbjct:   80 DTFEMDI--DGDAINLFNERITTLK---KALPTARICLECTGLEWIFAQIAQDRGIDAFYSRSATALRKYAETAPDVADATLLLTGKVLEKQVKRLAKFPEVNCIAVSNKEEADILSQGLAAEIARAMKKRRSKVSASRDKYLDAKTGDSRAKGY-------LESANYILRISSEQQDKAGQQLLDDIEAIEKDCENLNFHGV---------ILDSVESIETYRAIKDKLKRFCHKPDQFKIAIPFDESKDAAFYKDFPTDSR-QTLW 325          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig428.10948.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FMZ7_ECTSI1.710e-11964.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CMK3_9STRA4.670e-5742.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1VHY5_HETAK9.420e-1427.24Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..348
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..32
score: 0.808
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig428contigH-paniculata_contig428:7230..11513 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig428.10948.1mRNA_H-paniculata_contig428.10948.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig428 7223..11780 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig428.10948.1 ID=prot_H-paniculata_contig428.10948.1|Name=mRNA_H-paniculata_contig428.10948.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=349bp
MSFDRPPYTHTITMAALLFLFWVFIPCAHTFAGVCGCSCQMRSAYQIERS
RSLSPMVQSARSSRVSLERSQRGWHPRKRSRGILMGTEEVEDFEVDVELD
TDGLDIFGTIITQVKMEGRVPASSHLVYDCSHGEWLLAQMAYDRKIRYFS
SKSVKQLGTIAPLLPDNSRFIFSGALIPKQVKRLVKTKGVSAVVVRDVEG
PVALSEALYEERDLLSDKVLSKVSQSRERFLLERGGDDRRANQEGPMATV
AEGLHVFMRIEKGQQAPEVVETILEINKRCGNLSVVGLWGGDLKEDACLQ
LLEEVRAKSGITDLRVALDHKGPSSAKWFKDLSSKRRGPIMWTFEYDL*
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