prot_H-paniculata_contig42788.10946.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig42788.10946.1
Unique Nameprot_H-paniculata_contig42788.10946.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length240
Homology
BLAST of mRNA_H-paniculata_contig42788.10946.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 1.560e-51
Identity = 100/270 (37.04%), Postives = 152/270 (56.30%), Query Frame = 0
Query:    1 FLRNTSIPVPLKVSVVRSIVVPQMLHGAEIYGMNKKITSRMQKYPNQTCRLMIGMIAKTLVSNVALWRELQMAPISVNAAARRARAVSKCEGLTTYVKEVAHAKFTNRKWTWCTGAIKWVKRYVDPLARAHP-----RVQKPEGYGGGWRLVDPQSLAKFVKKLIWLREEKV-------------------------GSPLMGKGLCALSRFRLGGFWTLRRFAVCGLVPEKYKTYCSFCKADKGETIEHLLLECSRWAESRKTWLGDLI 240
            +L    IPVPLKV+VVR +++P++L GAE++GM   IT+R+Q Y N+  R++ GM  K  VS+VALWREL++ PI  +AAARRAR + K   L T++  +    + +RKWTW TG  +W+ RY   LA+A       ++++P    GGW  ++PQ L++ +  ++W REE+V                         G   + +GL  + R R+GGFW   R +  G++  +YK  C  CK    E + H+L +C  W+E+R   L  LI
Sbjct:  858 YLLCRQIPVPLKVAVVRGVILPRLLFGAEVFGMRTSITNRLQVYVNRAYRMVAGMSPKATVSSVALWRELEIPPICASAAARRARTMQKASKLKTWIASIMAQPYKHRKWTWGTGTGRWMNRYSHRLAKATSDDLPAKMRRP----GGWIKMNPQELSRCITAVVWEREERVAWSKTADDYKQMHFETNPLAAARAAGHATLEEGLALIIRCRVGGFWGAGRLSRRGMIHPRYKRMCPCCKRRVEEDLAHVLFDCPTWSEARNGLLAPLI 1123          
BLAST of mRNA_H-paniculata_contig42788.10946.1 vs. uniprot
Match: A0A1R0GP03_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium mucronatum TaxID=133383 RepID=A0A1R0GP03_9FUNG)

HSP 1 Score: 120 bits (300), Expect = 2.510e-27
Identity = 74/252 (29.37%), Postives = 126/252 (50.00%), Query Frame = 0
Query:    1 FLRNTSIPVPLKVSVVRSIVVPQMLHGAEIYGMNKKITSRMQKYPNQTCRLMIGMIAKTLVSNVALWRELQMAPISVNAAARRARAVSKCEGLTTYVKEVAHAKFTNRKWTWCTGAIKWVKRYVDPLARAHPRVQKPEGYGGGWRLVDPQSLAKFVKKLI-WLREEKVGS-----------PLMGKGLCALSRFRLGGFWTLRRFAVCGLVPEKYKTYCSFCKADKGETIEHLLLECSRWAESRKTWLGDLI 240
            FL N +IP+ L+ +++RS+++P   +G E++GM+K  TS++Q   +   RL+IG   KT+  +  L  EL++  +    A  R RA  K   L T++ ++      +R  TW +G  +W KR+ D  A            G   + +D ++ A     +  WL+   +G            P   KG+  + + R G F T  + A   ++  KY   C FCK +  E++EHL+LECS+W + R+  LG+ +
Sbjct:  696 FLGNKNIPIALRATLIRSVLIPIATYGGELFGMSKARTSKLQTVIDTASRLVIGS-GKTIALH-RLREELKLTTVYTKTAVARERAFYKWPTLKTWITDLIEYPMKSRLDTWVSGTRRWTKRFCDHSAP-----------GETLKYLDRRTRANEYSVISNWLKSSGIGRIRNVTGLELIFPENSKGIQEIIKIRTGLFRTAMKLAKSKIIDRKYLQLCPFCKNNVPESVEHLILECSKWTQQRQEHLGEFL 934          
BLAST of mRNA_H-paniculata_contig42788.10946.1 vs. uniprot
Match: A0A1R1YP44_9FUNG (LINE-1 retrotransposable element ORF2 protein (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YP44_9FUNG)

HSP 1 Score: 114 bits (285), Expect = 2.700e-25
Identity = 68/250 (27.20%), Postives = 124/250 (49.60%), Query Frame = 0
Query:    1 FLRNTSIPVPLKVSVVRSIVVPQMLHGAEIYGMNKKITSRMQKYPNQTCRLMIGMIAKTLVSNVALWRELQMAPISVNAAARRARAVSKCEGLTTYVKEVAHAKFTNRKWTWCTGAIKWVKRYV---DPLARAHP-RVQKPEGYGGGWRLVDPQSLAKFVKK------LIWLREEKVGSPLMGKGLCALSRFRLGGFWTLRRFAVCGLVPEKYKTYCSFCKADKGETIEHLLLECSRWAESRKTWLGDLI 240
            FL    IP  +++++VR++++P + +G EI+GM+      +QK  +   RL+ G+   T +  +    EL++  I+   +  R R  +K  G  T++ E+ +    NR  TW +G I+W KR++   D    A   R +K           D   + ++V K        W+  E +  P   +G+  +++ R+G + T +  A   L+ E++KT C FC   + +T+EH+LL C +W   R+  +G  I
Sbjct: 1425 FLSRRDIPTAMRIALVRTVLMPILCYGGEIFGMSATRAGALQKIADDAARLVAGVGRSTALQRIR--NELKIDEINTRVSVARERGHTKWAGSKTWISELINQPLKNRLDTWVSGTIRWKKRFLKGADSKTTAQALRARKIRN--------DHSKITQWVMKNNLGLTSNWMGLE-LAYPEHARGIRLMAKVRMGAYMTAKSLANSRLILEEFKTKCPFCNGSEADTVEHMLLRCQKWNSQRQNCIGAFI 1663          
BLAST of mRNA_H-paniculata_contig42788.10946.1 vs. uniprot
Match: A0A1R1Y7R2_9FUNG (Putative RNA-directed DNA polymerase from transposon BS n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1Y7R2_9FUNG)

HSP 1 Score: 112 bits (281), Expect = 8.570e-25
Identity = 67/247 (27.13%), Postives = 121/247 (48.99%), Query Frame = 0
Query:    1 FLRNTSIPVPLKVSVVRSIVVPQMLHGAEIYGMNKKITSRMQKYPNQTCRLMIGMIAKTLVSNVALWRELQMAPISVNAAARRARAVSKCEGLTTYVKEVAHAKFTNRKWTWCTGAIKWVKRYV-----DPLARA--HPRVQKPEGYGGGWRLVDPQSLAKFVKKLIWLREEKVGSPLMGKGLCALSRFRLGGFWTLRRFAVCGLVPEKYKTYCSFCKADKGETIEHLLLECSRWAESRKTWLGDLI 240
            FL    +P  ++ +++R++++P + +G EI+GM+    S +QK  +   RL+ G+   T +S   L  E+++  I   A+  R R  +K     T++ E+ +  F NR  TW +G ++W KR++     +  A+A    +++        W + +   L        W+  E +  P   +G+  L++ R+G F T +  A    + E YK  C FC   + ET+EH+LL C +W   R   +G  I
Sbjct:  739 FLSRKDVPTAMRAALIRTVLIPILCYGCEIFGMSAVRCSTLQKVADDATRLVAGVGRSTALSR--LRSEMKIDDIFTRASVARERGHNKWTTSKTWITELINKPFKNRLDTWVSGTVRWKKRFLKGAGNNTTAQALRARKIRNDHSKITQWVIKNNLGLTSN-----WMGLE-LAYPEQARGIRLLAKVRMGAFMTAQSLANSRFISEDYKLKCPFCNVSEAETVEHMLLRCQKWNSQRSNCIGTFI 977          
BLAST of mRNA_H-paniculata_contig42788.10946.1 vs. uniprot
Match: A0A1R1X7T5_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X7T5_9FUNG)

HSP 1 Score: 110 bits (276), Expect = 4.100e-24
Identity = 66/247 (26.72%), Postives = 116/247 (46.96%), Query Frame = 0
Query:    1 FLRNTSIPVPLKVSVVRSIVVPQMLHGAEIYGMNKKITSRMQKYPNQTCRLMIGMIAKTLVSNVALWRELQMAPISVNAAARRARAVSKCEGLTTYVKEVAHAKFTNRKWTWCTGAIKWVKRYVDPL-------ARAHPRVQKPEGYGGGWRLVDPQSLAKFVKKLIWLREEKVGSPLMGKGLCALSRFRLGGFWTLRRFAVCGLVPEKYKTYCSFCKADKGETIEHLLLECSRWAESRKTWLGDLI 240
            FL    IP  ++ +++R++++P + +G EI+GM+      +QK  +   RL+ G+   T +    L  EL++  I    +  R R   K   L T++ ++    F NR  TW +G ++W KR++          A    +++        W + +   L     K  W+  E +  P   +G+  L++ R+G F T +  A    + E YK  C FC   + ET+EH+LL C +W+  R   +G  I
Sbjct:  977 FLSRKDIPTAMRAALIRTVLIPILCYGGEIFGMSALRCGTLQKVADDAARLVAGVGRSTALQR--LRNELKIEDIFTRVSVARERGHKKWVTLKTWISDLISQPFKNRLDTWVSGTVRWKKRFLKGAGNKTTAQALRARKIRNDHSKITEWVIRNNLGL-----KSNWMGLE-LAYPEHARGIRLLAKVRMGAFMTAQSLANSRFISEDYKLKCPFCNVSEAETVEHMLLRCQKWSSQRSNCIGAFI 1215          
BLAST of mRNA_H-paniculata_contig42788.10946.1 vs. uniprot
Match: A0A1R1YAQ4_9FUNG (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YAQ4_9FUNG)

HSP 1 Score: 108 bits (271), Expect = 1.830e-23
Identity = 64/250 (25.60%), Postives = 120/250 (48.00%), Query Frame = 0
Query:    1 FLRNTSIPVPLKVSVVRSIVVPQMLHGAEIYGMNKKITSRMQKYPNQTCRLMIGMIAKTLVSNVALWRELQMAPISVNAAARRARAVSKCEGLTTYVKEVAHAKFTNRKWTWCTGAIKWVKRYV----DPLARAHPRVQKPEGYGGGWRLVDPQSLAKFVKK------LIWLREEKVGSPLMGKGLCALSRFRLGGFWTLRRFAVCGLVPEKYKTYCSFCKADKGETIEHLLLECSRWAESRKTWLGDLI 240
            FL    IP  ++V+++R++++P + +G EI+GM+   +  +QK  +   RL+ G+   T +    L  EL++  I+   +  R R  +K     T++ E+    F NR  TW +G ++W +R++    +       R +K           D   + ++V +        W+  E +  P   +G+  L++ R+G F T +  A    + + YK  C FC   + +T+EH+LL C +W   R+  +G  I
Sbjct:  801 FLSRKDIPTAMRVALIRTVLIPILCYGGEIFGMSATRSGTLQKVADDATRLVAGVGKSTALQR--LRNELKIDDINTRVSVARERGHTKWASSKTWISELIKQPFKNRLDTWVSGTVRWKRRFLKGAENKTTAQALRARKIRN--------DHSKITEWVTRNNLGLTSNWMGLE-LAYPEHARGIRLLAKMRMGAFMTAQSLANSRFISDDYKLKCPFCNGSEADTVEHMLLRCQKWNSQRQNCIGAFI 1039          
BLAST of mRNA_H-paniculata_contig42788.10946.1 vs. uniprot
Match: A0A1R1X0A5_9FUNG (Uncharacterized protein n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X0A5_9FUNG)

HSP 1 Score: 105 bits (263), Expect = 5.160e-23
Identity = 65/250 (26.00%), Postives = 122/250 (48.80%), Query Frame = 0
Query:    1 FLRNTSIPVPLKVSVVRSIVVPQMLHGAEIYGMNKKITSRMQKYPNQTCRLMIGMIAKTLVSNVALWRELQMAPISVNAAARRARAVSKCEGLTTYVKEVAHAKFTNRKWTWCTGAIKWVKRYV---DPLARAHP-RVQKPEGYGGGWRLVDPQSLAKFVKK------LIWLREEKVGSPLMGKGLCALSRFRLGGFWTLRRFAVCGLVPEKYKTYCSFCKADKGETIEHLLLECSRWAESRKTWLGDLI 240
            FL   +IP  +++++VR++++P + +G EI+GM+      +QK  +   RL+ G+   T +  +    EL++  I+   +  R    +K  G  T++ E+ +    NR  TW +G I+W KR++   D    A   R +K           D + + ++V K        W+  E +  P   +G+  + + R+G + T +  A    + E++KT C FC   + +T+E +LL C +W+  R   +G  I
Sbjct:   68 FLSRRNIPTAMRIALVRTVLMPILCYGGEIFGMSATRAGALQKIADDEARLVAGVGRSTALQRIR--NELKIYEINTRVSIAREGGHTKWAGSKTWISELINQPLKNRLDTWVSGTIRWKKRFLKGADSKTTAQALRARKIRN--------DHRKINQWVMKNNLGLTCNWMGLE-LAYPEHARGIRLMEKVRMGAYMTAKSLANSRFILEEFKTKCQFCNGSEADTVELMLLRCHKWSSQRSNCIGAFI 306          
BLAST of mRNA_H-paniculata_contig42788.10946.1 vs. uniprot
Match: A0A1R1X4V9_9FUNG (Putative RNA-directed DNA polymerase from transposon BS n=2 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X4V9_9FUNG)

HSP 1 Score: 104 bits (259), Expect = 7.250e-22
Identity = 63/247 (25.51%), Postives = 115/247 (46.56%), Query Frame = 0
Query:    1 FLRNTSIPVPLKVSVVRSIVVPQMLHGAEIYGMNKKITSRMQKYPNQTCRLMIGMIAKTLVSNVALWRELQMAPISVNAAARRARAVSKCEGLTTYVKEVAHAKFTNRKWTWCTGAIKWVKRYVD-----PLARA--HPRVQKPEGYGGGWRLVDPQSLAKFVKKLIWLREEKVGSPLMGKGLCALSRFRLGGFWTLRRFAVCGLVPEKYKTYCSFCKADKGETIEHLLLECSRWAESRKTWLGDLI 240
            FL    IP  ++ +++R++++P + +G EI+GM+      +QK  +   RL+ G+   T +    L  EL++  +    +  R R  +K     T++ ++      NR  TW +G ++W KR++        ARA    +++        W + +   L        W+  E +  P   +G+  L++ R+G F T +  A    + E YK  C FC   + +T+EH+LL C +W   R   +G  I
Sbjct:  779 FLSRKDIPTAMRAALIRTVLIPILCYGGEIFGMSALRCGTLQKVADDAARLVAGVGRSTALQR--LRNELKIEDVFTRVSVARERGHNKWTTSKTWISDLITQPLKNRLDTWVSGTVRWEKRFLKGSENKTTARALRSRKIRNDNSKITQWVIENNLRLTSN-----WMGLE-LAYPEHARGIRLLAKVRMGAFMTAQSLANSRFITEGYKVKCPFCNGSEADTVEHMLLRCQKWNSQRSNCIGAFI 1017          
BLAST of mRNA_H-paniculata_contig42788.10946.1 vs. uniprot
Match: A0A1Y1S8L6_9MICR (LIN1 n=1 Tax=Enterospora canceri TaxID=1081671 RepID=A0A1Y1S8L6_9MICR)

HSP 1 Score: 102 bits (254), Expect = 3.490e-21
Identity = 72/243 (29.63%), Postives = 117/243 (48.15%), Query Frame = 0
Query:    2 LRNTSIPVPLKVSVVRSIVVPQMLHGAEIYGMNKKITSRMQKYPNQTCRLMIGMIAKTLVSNVALWRELQMAPISVNAAARRARAVSKCEGLTTYVKEVAHAKFTNRKWTWCTGAIKWVKRYV-DPLARAHPRVQKPEGYGGGWRLVDPQSLAKFVKKL-------IWLREEKVGSPLMGKGLCALSRFRLGGFWTLRRFAVCGLVPEKYKTYCSFCKADKGETIEHLLLECSRWAESRKTWL 236
            L  T +P   K+ ++ + ++P +L+GAE++GMN     ++Q+       L + M     VS   L  E   A ++ +AA RR RA  K   L T++  +    +  RK  W T + +W K Y+ + L     R++  E Y G     D     ++ K L       +W+ +  +  P + + L  + R RLG F   +R   C ++  KY   C  C+ D+ ETIEHLLL C RW ++R  +L
Sbjct: 1145 LCGTRVPTYFKLKLIHARLMPVLLYGAELWGMNTNNCRKLQQ--TLVGALRMAMRVGRNVSVGRLLAETGTALVAESAAKRRHRATRKFPTLKTWIAILLKNPYHGRKRVWSTNSQQWTKHYLKECLTENSKRLE--ELYAGRQLKADKTLATQWAKDLKLDTEPPVWI-QLGLEQPKLARALSEVGRIRLGVFPIGKRLVYCKVLDRKYLARCPACEQDEPETIEHLLLTCPRWDDARTRYL 1382          
BLAST of mRNA_H-paniculata_contig42788.10946.1 vs. uniprot
Match: L7JX89_TRAHO (RNA-directed DNA polymerase, Non LTR Retrotransposon (Fragment) n=1 Tax=Trachipleistophora hominis TaxID=72359 RepID=L7JX89_TRAHO)

HSP 1 Score: 92.8 bits (229), Expect = 6.520e-18
Identity = 64/249 (25.70%), Postives = 114/249 (45.78%), Query Frame = 0
Query:    2 LRNTSIPVPLKVSVVRSIVVPQMLHGAEIYGMNKKITSRMQKYPNQTCRLMIGMIAKTLVSNVALWRELQMAPISVNAAARRARAVSKCEGLTTYVKEVAHAKFTNRKWTWCTGAIKWVKRYV--DPLARAHPRVQKPEGYGGGWRLVDPQSLAKFVKKLIWLREEK----VGSPL-----------MGKGLCALSRFRLGGFWTLRRFAVCGLVPEKYKTYCSFCKADKGETIEHLLLECSRWAESRK 233
            +    IP+P++V++++S+++P    G+E+YGM+ + T+ +Q+  ++  R    M        +  + E+++  I + AA  R RA  K     T + +V    F   K TW TG  +W++R +  D L      V+K E         D  +  K+ +    +RE++     GS +           + +G   L++ R G F    R A  G +  +YK  C  C+    E   HLL  CS+W + R+
Sbjct:  557 ISRIEIPLPIRVTLIKSVLIPTATFGSELYGMSSQRTAPIQRVIDKAVRC--AMACPANYCRLTAYEEIRIECIDIRAAKARTRAFIKWRNSRTTISKVMKTDFKCPKTTWYTGTARWIRRLLKNDTLNSTQEGVKKVE---------DALTTGKYARSKSKIREKRRKLVFGSSISNWKETVKNYRVNRGWHVLTKIRTGTFMFGYRLAKYGRISSEYKKKCIACEKHGREDGIHLLWHCSKWEKERE 794          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42788.10946.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5H7_9PHAE1.560e-5137.04Reverse transcriptase domain-containing protein n=... [more]
A0A1R0GP03_9FUNG2.510e-2729.37RNA-directed DNA polymerase from mobile element jo... [more]
A0A1R1YP44_9FUNG2.700e-2527.20LINE-1 retrotransposable element ORF2 protein (Fra... [more]
A0A1R1Y7R2_9FUNG8.570e-2527.13Putative RNA-directed DNA polymerase from transpos... [more]
A0A1R1X7T5_9FUNG4.100e-2426.72RNA-directed DNA polymerase from mobile element jo... [more]
A0A1R1YAQ4_9FUNG1.830e-2325.60RNA-directed DNA polymerase from mobile element jo... [more]
A0A1R1X0A5_9FUNG5.160e-2326.00Uncharacterized protein n=1 Tax=Smittium culicis T... [more]
A0A1R1X4V9_9FUNG7.250e-2225.51Putative RNA-directed DNA polymerase from transpos... [more]
A0A1Y1S8L6_9MICR3.490e-2129.63LIN1 n=1 Tax=Enterospora canceri TaxID=1081671 Rep... [more]
L7JX89_TRAHO6.520e-1825.70RNA-directed DNA polymerase, Non LTR Retrotranspos... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig42788contigH-paniculata_contig42788:866..1660 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig42788.10946.1mRNA_H-paniculata_contig42788.10946.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig42788 866..1660 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig42788.10946.1 ID=prot_H-paniculata_contig42788.10946.1|Name=mRNA_H-paniculata_contig42788.10946.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=240bp
FLRNTSIPVPLKVSVVRSIVVPQMLHGAEIYGMNKKITSRMQKYPNQTCR
LMIGMIAKTLVSNVALWRELQMAPISVNAAARRARAVSKCEGLTTYVKEV
AHAKFTNRKWTWCTGAIKWVKRYVDPLARAHPRVQKPEGYGGGWRLVDPQ
SLAKFVKKLIWLREEKVGSPLMGKGLCALSRFRLGGFWTLRRFAVCGLVP
EKYKTYCSFCKADKGETIEHLLLECSRWAESRKTWLGDLI
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