prot_H-paniculata_contig4278.10944.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4278.10944.1
Unique Nameprot_H-paniculata_contig4278.10944.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length105
Homology
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BLAST of mRNA_H-paniculata_contig4278.10944.1 vs. uniprot
Match: D7FWP4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWP4_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 2.420e-65
Identity = 98/104 (94.23%), Postives = 101/104 (97.12%), Query Frame = 0 
Query:    1 MVNVPKERRTFCKGKKCTKHTVHKVTQYKSGKASNFAQGKRRYDHKQKGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGHQY 104
            MVNVPKERRT+CK K+C KHTVHKVTQYKSGKASNFAQGKRRYDHKQ+GFGGQTKPIFHKKAKTTKKVTLRLECK CKAKKQLVIARCKHFELGEKKQATGHQY
Sbjct:   35 MVNVPKERRTYCKDKRCNKHTVHKVTQYKSGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKLCKAKKQLVIARCKHFELGEKKQATGHQY 138
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BLAST of mRNA_H-paniculata_contig4278.10944.1 vs. uniprot
Match: A0A835YP36_9STRA (Zinc-binding ribosomal protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP36_9STRA)

HSP 1 Score: 195 bits (495), Expect = 6.380e-63
Identity = 95/104 (91.35%), Postives = 99/104 (95.19%), Query Frame = 0 
Query:    1 MVNVPKERRTFCKGKKCTKHTVHKVTQYKSGKASNFAQGKRRYDHKQKGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGHQY 104
            MVNVPKERRT+CK KKC KHTVHKV+QYKSGKASNFAQGKRRYD KQKG+GGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVI RCKHFELGEKK+ATGH Y
Sbjct:    1 MVNVPKERRTYCKSKKCGKHTVHKVSQYKSGKASNFAQGKRRYDSKQKGYGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIKRCKHFELGEKKKATGHVY 104
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BLAST of mRNA_H-paniculata_contig4278.10944.1 vs. uniprot
Match: F0YGF9_AURAN (RL44_PICJA 60S ribosomal protein L44 n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YGF9_AURAN)

HSP 1 Score: 188 bits (478), Expect = 2.500e-60
Identity = 90/104 (86.54%), Postives = 95/104 (91.35%), Query Frame = 0 
Query:    1 MVNVPKERRTFCKGKKCTKHTVHKVTQYKSGKASNFAQGKRRYDHKQKGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGHQY 104
            MVNVPKER+T+CK KKC KHT HKVTQYK+GKASNFAQGKRRYD KQ GFGGQTKP+FHKKAKTTKKVTLRLECKECKAKKQL I RCKHFELGEKK+ TGH Y
Sbjct:    1 MVNVPKERKTYCKAKKCRKHTTHKVTQYKAGKASNFAQGKRRYDMKQMGFGGQTKPVFHKKAKTTKKVTLRLECKECKAKKQLTIKRCKHFELGEKKKTTGHTY 104
[Close]
BLAST of mRNA_H-paniculata_contig4278.10944.1 vs. uniprot
Match: A0A7S2UXA0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXA0_9STRA)

HSP 1 Score: 187 bits (475), Expect = 7.170e-60
Identity = 89/104 (85.58%), Postives = 96/104 (92.31%), Query Frame = 0 
Query:    1 MVNVPKERRTFCKGKKCTKHTVHKVTQYKSGKASNFAQGKRRYDHKQKGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGHQY 104
            MVNVPKERRT+CK K C KHT+HKVTQYK+GKASNFAQGKRRYDHKQKG+GGQTKPIFHKKAKTTKK+ LRLECKECK KKQLVI R KHFELGEKK++TG QY
Sbjct:    1 MVNVPKERRTYCKAKNCNKHTIHKVTQYKAGKASNFAQGKRRYDHKQKGYGGQTKPIFHKKAKTTKKIVLRLECKECKTKKQLVIKRTKHFELGEKKKSTGPQY 104
[Close]
BLAST of mRNA_H-paniculata_contig4278.10944.1 vs. uniprot
Match: W7TXG3_9STRA (60s ribosomal protein l44 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXG3_9STRA)

HSP 1 Score: 187 bits (474), Expect = 1.020e-59
Identity = 90/104 (86.54%), Postives = 97/104 (93.27%), Query Frame = 0 
Query:    1 MVNVPKERRTFCKGKKCTKHTVHKVTQYKSGKASNFAQGKRRYDHKQKGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGHQY 104
            MV +PKER+TFCKGKKC KHTVHKVTQYK+GKASN+AQGKRRYD KQ+G+GGQTKPI HKKAKTTKKVTLRLECKECK KKQLVI R KHFELGEKK+ATGHQY
Sbjct:    1 MVCIPKERKTFCKGKKCKKHTVHKVTQYKAGKASNYAQGKRRYDRKQQGYGGQTKPILHKKAKTTKKVTLRLECKECKTKKQLVIKRTKHFELGEKKKATGHQY 104
[Close]
BLAST of mRNA_H-paniculata_contig4278.10944.1 vs. uniprot
Match: I6ZGD0_9STRA (Ribosomal protein L44 n=1 Tax=Aurantiochytrium sp. KRS101 TaxID=797128 RepID=I6ZGD0_9STRA)

HSP 1 Score: 185 bits (470), Expect = 4.150e-59
Identity = 89/104 (85.58%), Postives = 96/104 (92.31%), Query Frame = 0 
Query:    1 MVNVPKERRTFCKGKKCTKHTVHKVTQYKSGKASNFAQGKRRYDHKQKGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGHQY 104
            MVNVPKERRTFCKGK+C KHTVHKVTQYK+GKASNFAQGKRRYD KQKG+GGQTKPIFHKKAKTTKKVTLRLECKECK K Q+ + RCK FELG+KK+A GHQY
Sbjct:    1 MVNVPKERRTFCKGKQCRKHTVHKVTQYKAGKASNFAQGKRRYDRKQKGYGGQTKPIFHKKAKTTKKVTLRLECKECKTKCQIGLKRCKTFELGQKKEAAGHQY 104
[Close]
BLAST of mRNA_H-paniculata_contig4278.10944.1 vs. uniprot
Match: A0A485LSL1_9STRA (Aste57867_25253 protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LSL1_9STRA)

HSP 1 Score: 184 bits (468), Expect = 8.380e-59
Identity = 87/104 (83.65%), Postives = 97/104 (93.27%), Query Frame = 0 
Query:    1 MVNVPKERRTFCKGKKCTKHTVHKVTQYKSGKASNFAQGKRRYDHKQKGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGHQY 104
            MVN+PKERRTFCKGKKC KHTVHKVTQYK+GKAS FAQG RRY+ KQ+GFGGQTKP+FHKKAKTTKK+TLR+ECKECKAKKQL I R KHFELGEKK+++GHQY
Sbjct:    1 MVNIPKERRTFCKGKKCRKHTVHKVTQYKAGKASKFAQGARRYNEKQQGFGGQTKPVFHKKAKTTKKITLRMECKECKAKKQLPIKRTKHFELGEKKKSSGHQY 104
[Close]
BLAST of mRNA_H-paniculata_contig4278.10944.1 vs. uniprot
Match: A0A7S3LII2_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LII2_9STRA)

HSP 1 Score: 184 bits (468), Expect = 8.380e-59
Identity = 87/104 (83.65%), Postives = 95/104 (91.35%), Query Frame = 0 
Query:    1 MVNVPKERRTFCKGKKCTKHTVHKVTQYKSGKASNFAQGKRRYDHKQKGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGHQY 104
            MVNVPKERRTFCKGKKC KHT+HKVTQYK+GKASNFAQGKRRYD KQ+G+GGQTKP+FHKKAKTTKKV +RLECK+CK K QL + RCKHFELGEKK  TGHQY
Sbjct:    1 MVNVPKERRTFCKGKKCLKHTMHKVTQYKAGKASNFAQGKRRYDRKQQGYGGQTKPVFHKKAKTTKKVVIRLECKDCKTKFQLRLKRCKHFELGEKKAPTGHQY 104
[Close]
BLAST of mRNA_H-paniculata_contig4278.10944.1 vs. uniprot
Match: A0A812MGG9_SYMMI (RIM-C protein n=3 Tax=cellular organisms TaxID=131567 RepID=A0A812MGG9_SYMMI)

HSP 1 Score: 184 bits (466), Expect = 1.590e-58
Identity = 88/102 (86.27%), Postives = 95/102 (93.14%), Query Frame = 0 
Query:    1 MVNVPKERRTFCKGKKCTKHTVHKVTQYKSGKASNFAQGKRRYDHKQKGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGH 102
            MVNVPKER+TFCKGKKC KHT+HKVTQYKSGKASNFAQGKRRYDHKQ GFGGQTKP+FHKKAKTTKK+TLRLECKECKAKKQL I R KHFELGEKK+ + +
Sbjct:    1 MVNVPKERKTFCKGKKCGKHTLHKVTQYKSGKASNFAQGKRRYDHKQMGFGGQTKPVFHKKAKTTKKITLRLECKECKAKKQLCIKRTKHFELGEKKKVSAY 102
[Close]
BLAST of mRNA_H-paniculata_contig4278.10944.1 vs. uniprot
Match: A0A7S3NIT2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIT2_9STRA)

HSP 1 Score: 184 bits (466), Expect = 1.640e-58
Identity = 89/100 (89.00%), Postives = 95/100 (95.00%), Query Frame = 0 
Query:    1 MVNVPKERRTFCKGKKCTKHTVHKVTQYKSGKASNFAQGKRRYDHKQKGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQAT 100
            MVNVPKERRT+CKGKKC KHTVHKVTQYK+GKASNFAQGKRRYD KQ+G+GGQTKPIFHKKAKTTKKV LRLECKECKAKKQL I RCKHFELGEKK++T
Sbjct:    1 MVNVPKERRTYCKGKKCKKHTVHKVTQYKAGKASNFAQGKRRYDAKQQGYGGQTKPIFHKKAKTTKKVVLRLECKECKAKKQLCIKRCKHFELGEKKKST 100
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4278.10944.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWP4_ECTSI2.420e-6594.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YP36_9STRA6.380e-6391.35Zinc-binding ribosomal protein n=1 Tax=Tribonema m... [more]
F0YGF9_AURAN2.500e-6086.54RL44_PICJA 60S ribosomal protein L44 n=2 Tax=Pelag... [more]
A0A7S2UXA0_9STRA7.170e-6085.58Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7TXG3_9STRA1.020e-5986.5460s ribosomal protein l44 n=2 Tax=Monodopsidaceae ... [more]
I6ZGD0_9STRA4.150e-5985.58Ribosomal protein L44 n=1 Tax=Aurantiochytrium sp.... [more]
A0A485LSL1_9STRA8.380e-5983.65Aste57867_25253 protein n=7 Tax=Saprolegniaceae Ta... [more]
A0A7S3LII2_9STRA8.380e-5983.65Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A812MGG9_SYMMI1.590e-5886.27RIM-C protein n=3 Tax=cellular organisms TaxID=131... [more]
A0A7S3NIT2_9STRA1.640e-5889.00Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.80coord: 1..104
e-value: 4.4E-47
score: 160.9
NoneNo IPR availablePANTHERPTHR10369:SF360S RIBOSOMAL PROTEIN L36Acoord: 1..102
NoneNo IPR availablePRODOMPD002841coord: 26..93
e-value: 2.0E-25
score: 282.0
IPR000552Ribosomal protein L44ePFAMPF00935Ribosomal_L44coord: 19..94
e-value: 3.2E-34
score: 117.2
IPR000552Ribosomal protein L44ePANTHERPTHR1036960S RIBOSOMAL PROTEIN L36A/L44coord: 1..102
IPR000552Ribosomal protein L44ePROSITEPS01172RIBOSOMAL_L44Ecoord: 63..74
IPR011332Zinc-binding ribosomal proteinSUPERFAMILY57829Zn-binding ribosomal proteinscoord: 2..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4278contigH-paniculata_contig4278:1919..4361 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4278.10944.1mRNA_H-paniculata_contig4278.10944.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4278 1345..5481 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4278.10944.1 ID=prot_H-paniculata_contig4278.10944.1|Name=mRNA_H-paniculata_contig4278.10944.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=105bp
MVNVPKERRTFCKGKKCTKHTVHKVTQYKSGKASNFAQGKRRYDHKQKGF
GGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQAT
GHQY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000552Ribosomal_L44e
IPR011332Ribosomal_zn-bd