prot_H-paniculata_contig4274.10937.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4274.10937.1
Unique Nameprot_H-paniculata_contig4274.10937.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length218
Homology
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BLAST of mRNA_H-paniculata_contig4274.10937.1 vs. uniprot
Match: D7FXJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXJ0_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 1.420e-40
Identity = 82/147 (55.78%), Postives = 100/147 (68.03%), Query Frame = 0 
Query:    3 AVARTVVSCLESFYLRRMFALGRFGRRALASAMGEALPRLAGAQPLSSPATSLQHLEKMALDGVRSTVSHALRTLDEATG--DGLILSPIVEEAMADVHGVWKRLLEACRRWGWVEAAPLGLAPGGQKEFGAPLIIRAGRIACLLPK 147
            AVA   V  +ESFYLRRMF  GRFGRR LASA+ EA+P +  A PLSS +TSLQ L+ +AL+GVR+    A RTLDE     D L +SP  ++A+ DVHG WKRLL AC   G  EA PLGL PGG + F  P ++RAGR  CL+P+
Sbjct:  530 AVALDSVELMESFYLRRMFTAGRFGRRVLASAIREAVPLMHNAGPLSSNSTSLQDLQNLALEGVRNAAEQAFRTLDEENDKDDPLAMSPTAQQALRDVHGFWKRLLLACVEGGRAEARPLGLVPGGMETFVTPFVVRAGRTTCLMPR 676
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BLAST of mRNA_H-paniculata_contig4274.10937.1 vs. uniprot
Match: A0A6H5KLL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLL3_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 8.830e-40
Identity = 82/147 (55.78%), Postives = 100/147 (68.03%), Query Frame = 0 
Query:    3 AVARTVVSCLESFYLRRMFALGRFGRRALASAMGEALPRLAGAQPLSSPATSLQHLEKMALDGVRSTVSHALRTLDEATG--DGLILSPIVEEAMADVHGVWKRLLEACRRWGWVEAAPLGLAPGGQKEFGAPLIIRAGRIACLLPK 147
            AVA   V  +ESFYLRRMF  GRFGRR LASA+ EA+P ++ A PLSS +TSLQ L+ +AL+GVRS    A RTLDE     D L +S   ++A+ DVHG WKRLL AC   G  EA PLGL PGG + F  P ++RAGR  CL+P+
Sbjct:  128 AVAFASVELMESFYLRRMFTAGRFGRRVLASAIREAVPLMSNAGPLSSNSTSLQDLQNLALEGVRSAAEQACRTLDEEEDKDDPLAMSLTAQQALRDVHGFWKRLLLACVEGGRAEARPLGLVPGGMETFVTPFVVRAGRTTCLIPR 274
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4274.10937.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXJ0_ECTSI1.420e-4055.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLL3_9PHAE8.830e-4055.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF11715Nup160coord: 12..145
e-value: 1.6E-5
score: 23.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4274contigH-paniculata_contig4274:3221..9336 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4274.10937.1mRNA_H-paniculata_contig4274.10937.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4274 3221..9336 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4274.10937.1 ID=prot_H-paniculata_contig4274.10937.1|Name=mRNA_H-paniculata_contig4274.10937.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=218bp
EAAVARTVVSCLESFYLRRMFALGRFGRRALASAMGEALPRLAGAQPLSS
PATSLQHLEKMALDGVRSTVSHALRTLDEATGDGLILSPIVEEAMADVHG
VWKRLLEACRRWGWVEAAPLGLAPGGQKEFGAPLIIRAGRIACLLPKPRN
SYSNLGGGGGSAMRVATLQKLAASVPQVVEAACSETFASNDGRGGDAAAA
FRGFECISAFSREGSAGG
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