mRNA_H-paniculata_contig4272.10932.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig4272.10932.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 157 bits (396), Expect = 1.030e-43 Identity = 78/185 (42.16%), Postives = 110/185 (59.46%), Query Frame = 1
Query: 1 ITPLLSFDHKKNRVDLMLDQISHDRKTFKTGLHSINVNEAWFYLTRDKGKVRMVPGEVKVGSVKVQHKSHISKVMFICAVSRSDPVHDFDGKIGIWRVCVIKEAQRTIARRARS-----------------------EEYDVDVTIDAEWYRNWYLEDFLPAANNKMWWLEGEEGIVQQDGATPH 486
I P LS K++R+D + D++ + + ++++E+WFYL R+K KVR+ GE G +V H+SH+ K+M I A +R DP HDFDGKIGIWR+CVI+ AQR+ + S EEY+ D TIDAEWY++WY++ LPA KM WL + +VQQDGA+PH
Sbjct: 121 IKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPH 305
BLAST of mRNA_H-paniculata_contig4272.10932.1 vs. uniprot
Match: W4H1M3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H1M3_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 2.680e-17 Identity = 56/168 (33.33%), Postives = 90/168 (53.57%), Query Frame = 1
Query: 1 ITPLLSFDHKKNRVDLMLDQISHDRKTFKTGLHSINVNEAWFYLTRDKGKVRMVPGEVKVGSVKVQHKSHISKVMFICAVSRSDPVHD----FDGKIGIWRVCVIKEAQRTIARRARSEEYDVDVTIDAEWYRNWYLEDFLPAANNKMWWLEGEEGIV--QQDGATPH 486
ITP L+ +K +R+ ++ + ++ L ++++E WFY+T+++ K +VPGE + V + K +I+KVMF+CAV+R VH +DGKIGIW + +AQR R +T+ E YR + L+ LPA K W G++ + Q D A H
Sbjct: 136 ITPFLTDANKYSRMKYAVEFVGPTQE-LNNLLQYVHLDEKWFYITKERRKFYLVPGEKEPKRV-CKSKRYITKVMFLCAVARPRYVHGAEMWWDGKIGIWPIVESVQAQRASVNRPAGTLETKSITVTKEVYRTFLLDKVLPAIVAK--WPRGDDRAIKLQHDNARAH 299
BLAST of mRNA_H-paniculata_contig4272.10932.1 vs. uniprot
Match: A0A485KCE6_9STRA (Aste57867_2111 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KCE6_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 3.220e-14 Identity = 55/168 (32.74%), Postives = 92/168 (54.76%), Query Frame = 1
Query: 1 ITPLLSFDHKKNRVDLMLDQISHDRKTFKTGLHSINVNEAWFYLTRDKGKVRMVPGEVK-VGSVKVQHKSHISKVMFICAVSRSDPVHD----FDGKIGIWRVCVIKEAQRTIARRARSEEYDVDVTIDAEWYRNWYLEDFLPAANNKMWWLEGEEGI-VQQDGATPH 486
I P+L+ +K +R+ L ++ + + L ++++E WFYLT+++ + +VPGE K V S K +K +I+KVMF+ AV+R + D +DGKIG W I A R+ R V++ + YR++ +E LPA +K W ++ + +QQD A H
Sbjct: 134 IRPVLTDSNKYSRLKFALSMVTSNMQ-LDDMLDCVHLDEKWFYLTQERRRFYLVPGECKPVRSCK--NKRYITKVMFLSAVARPRYIDDTDTWWDGKIGTWPFVEIVPAARSSVNRPAGTPEMKSVSVIRDVYRSFLIEKVLPAILDK--WPNAKKIVKLQQDNAPAH 296
BLAST of mRNA_H-paniculata_contig4272.10932.1 vs. uniprot
Match: A0A485KBU5_9STRA (Aste57867_2438 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KBU5_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 3.950e-14 Identity = 53/168 (31.55%), Postives = 82/168 (48.81%), Query Frame = 1
Query: 1 ITPLLSFDHKKNRVDLMLDQISHDRKTFKTGLHSINVNEAWFYLTRDKGKVRMVPGEVKVGSVKVQHKSHISKVMFICAVSRSDPVHD----FDGKIGIWRVCVIKEAQRTIARRARSEEYDVDVTIDAEWYRNWYLEDFLPAANNKMWWLEGEEG--IVQQDGATPH 486
+ PLL+ +K R+ + D F + ++++E WFY+TR K + ++PGE Q K I+KVMF+ AV+R ++ FDGKIG W + AQR R V V + + YR+ + + +PA NK W + ++QQD A PH
Sbjct: 131 LKPLLTDANKAARLKWAQKFVGPDL-VFDDMMSYVHIDEKWFYMTRVKRTLYLLPGEEPPHRT-TQSKRFITKVMFLSAVARPRWNYNKDEWFDGKIGTWHFTEVVPAQRNSRNRPSGTLVTVPVNVSRDTYRDMLVNNVIPAIKNK--WPDARTSCIVIQQDNARPH 294
BLAST of mRNA_H-paniculata_contig4272.10932.1 vs. uniprot
Match: W4GP40_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GP40_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 7.770e-12 Identity = 49/166 (29.52%), Postives = 82/166 (49.40%), Query Frame = 1
Query: 1 ITPLLSFDHKKNRVDLMLDQISHDRKTFKTGLHSINVNEAWFYLTRDKGKVRMVPGEVKVGSVKVQHKSHISKVMFICAVSRSDPVHD----FDGKIGIWRVCVIKEAQRTIARRARSEEYDVDVTIDAEWYRNWYLEDFLPAANNKMWWLEGEEGIVQQDGATPH 486
I P L+ +K R+ +++ D + ++V+E WFY+TR K + ++PGE + + K I+KVMF+ AV+R ++ FDG+IG W AQR+ R V T+ + YR+ +++ +PA K + ++QQD A PH
Sbjct: 56 IKPQLTEANKAARLKWAFERLGPDLMVHDM-MDYVHVDEKWFYMTRVKKTLYLLPGE-EPPHRSTKSKRFITKVMFLSAVARPRWNYNTNEWFDGRIGTWHFTQTVPAQRSSRNRPSGTMVTVPCTVTRDTYRDMLIDNVIPAIKAKWPNDKAARILLQQDNARPH 219
BLAST of mRNA_H-paniculata_contig4272.10932.1 vs. uniprot
Match: F0WV30_9STRA (Transposase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WV30_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 1.230e-11 Identity = 48/168 (28.57%), Postives = 77/168 (45.83%), Query Frame = 1
Query: 1 ITPLLSFDHKKNRVDLMLDQISHDRK--TFKTGLHSINVNEAWFYLTRDKGKVRMVPGEVKVGSVKVQHKSHISKVMFICAVSR----SDPVHDFDGKIGIWRVCVIKEAQRTIARRARSEEYDVDVTIDAEWYRNWYLEDFLPAANNKMWWLEGEEGIVQQDGATPH 486
+ P LS D RV + I+ + TF ++++E WF++ + K +V + P E + +HKSHI K+MF+CAV+R S FDG++G+W A+R R + E Y+ ++ LPA G ++Q+D AT H
Sbjct: 173 LKPTLSEDQNAERVRFISSFITLIPRGATFSPMYDRVHLDEKWFFMKKTKRRVYLTPTE-PTPYLHTRHKSHIPKIMFLCAVARPRINSCTGEVFDGRLGMWPFANYAPAERASRNREAGTLVLKSFPANKETYKRMLIDSVLPAIKLNWPSWSGRRIVLQRDNATSH 339
BLAST of mRNA_H-paniculata_contig4272.10932.1 vs. uniprot
Match: UPI001C2659A6 (uncharacterized protein LOC121754350 n=3 Tax=Salvia splendens TaxID=180675 RepID=UPI001C2659A6) HSP 1 Score: 71.6 bits (174), Expect = 1.360e-11 Identity = 59/175 (33.71%), Postives = 85/175 (48.57%), Query Frame = 1
Query: 1 ITPLLSFDHKKNRVDLMLDQISHDRKT----FKTGLHSINVNEAWFYLTRDKGKVRMVPGEVKVGSVKVQHKSHISKVMFICAVSRSDPVHD------FDGKIGIWRVCVIKEAQRTIARR-ARSEEYDVDVTIDAEWYRNWYLEDFLPAANNKMWWLEGEEGIV--QQDGATPH 486
I P L+ DH R+ L + DR F+ ++I+++E WFY+T+ + + PGE + ++K ISK+MF+CAVSR P+ FDGKIGI+ AQRT R A + E +I E + + +PA K W EG + QQD A PH
Sbjct: 126 IKPNLTADHMLLRLRFTLQSLELDRILNRIMFRNMDNTIHIDEKWFYITQGSQRFYLAPGEAEPHRT-CKNKKFISKIMFMCAVSR--PLFGQNGEVLFDGKIGIFPFTKQVAAQRTSKNRVAGTMETKPIESITKEVTKQCLINKIIPAIFEK--WPEGASKRIRIQQDNAKPH 295
BLAST of mRNA_H-paniculata_contig4272.10932.1 vs. uniprot
Match: UPI001C2541F4 (uncharacterized protein LOC121800620 n=4 Tax=Salvia splendens TaxID=180675 RepID=UPI001C2541F4) HSP 1 Score: 71.6 bits (174), Expect = 1.370e-11 Identity = 53/171 (30.99%), Postives = 86/171 (50.29%), Query Frame = 1
Query: 1 ITPLLSFDHKKNRVDLMLDQ----ISHDRKTFKTGLHSINVNEAWFYLTRDKGKVRMVPGEVKVGSVKVQHKSHISKVMFICAVSRS----DPVHDFDGKIGIWRVCVIKEAQRTIARRARSE-EYDVDVTIDAEWYRNWYLEDFLPAANNKMWWLEGEEGIVQQDGATPH 486
I P L+ +K R+ L + I+ R F++ + ++++E WFY+T+ + ++P EV+ + K I+KVMF+CAVSR D FDGK+GI+ + AQR RA+ E +++ R+ + +PA K +E +QQD ATPH
Sbjct: 131 IKPALTDANKLARLKWCLSKLEPHINAGRVQFESMHNVVHIDEKWFYMTKTSDRYYLLPDEVEPYRA-CKSKRFITKVMFMCAVSRPVFGLDGQTKFDGKLGIFPFTELVAAQRKSKNRAKGTLETKPISSVNKSVMRDCIINKIVPAIKAKWPEWASKEIYIQQDNATPH 300
BLAST of mRNA_H-paniculata_contig4272.10932.1 vs. uniprot
Match: UPI002009A94E (uncharacterized protein LOC125206766 n=2 Tax=Salvia hispanica TaxID=49212 RepID=UPI002009A94E) HSP 1 Score: 70.5 bits (171), Expect = 3.360e-11 Identity = 60/175 (34.29%), Postives = 93/175 (53.14%), Query Frame = 1
Query: 1 ITPLLSFDHKKNRVDLMLDQISHDR--KT--FKTGLHSINVNEAWFYLTRDKGKVRMVPGEVKVGSVKVQHKSHISKVMFICAVSRSDPVHD------FDGKIGIWRVCVIKEAQRTIA-RRARSEEYDVDVTIDAEWYRNWYLEDFLPAANNKMWWLEG--EEGIVQQDGATPH 486
I P L+ +K R+ L+ + DR KT FK ++I+++E WFY+T+ + + PGE + Q+K ISK+MF+CAV+R P+ FDGKIGI+ A+R+ RRA + E +I E ++ + +PA +K W EG ++ +QQD A PH
Sbjct: 95 IRPDLTGPNKLLRMRFTLEALELDRILKTIKFKDMHNTIHIDEKWFYITKGMHRFYLAPGEDEPHR-SCQNKKFISKIMFMCAVTR--PLFGRNGEVLFDGKIGIFPFIERVPAKRSSKNRRAGTIETKPIESIAKEVTKDCIINKIIPAIMSK--WPEGASKQIFIQQDNAKPH 264
BLAST of mRNA_H-paniculata_contig4272.10932.1 vs. uniprot
Match: UPI0020091A08 (uncharacterized protein LOC125206097 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020091A08) HSP 1 Score: 70.5 bits (171), Expect = 3.470e-11 Identity = 55/171 (32.16%), Postives = 84/171 (49.12%), Query Frame = 1
Query: 1 ITPLLSFDHKKNRVDLMLDQISHDRKTFKT---GLHSI-NVNEAWFYLTRDKGKVRMVPGEVKVGSVKVQHKSHISKVMFICAVSR----SDPVHDFDGKIGIWRVCVIKEAQRTIARRARSE-EYDVDVTIDAEWYRNWYLEDFLPAANNKMWWLEGEEGIVQQDGATPH 486
I P L+ +K R+ L Q+ K G+H+I +++E WFY+T+ + ++P E + + K +I+KVMF+CAVSR S+ +DGK+GI+ AQR R R E T++ E R + +PA K +E +QQD ATPH
Sbjct: 132 IKPALTELNKLARLKWCLTQLQPSITQGKVHFHGMHNIVHIDEKWFYMTKTSDRYYLLPDEDEPYR-SCKSKRYITKVMFMCAVSRPQFDSEGQPTYDGKVGIFPFTEAVPAQRKSKNRDRGTLETKPITTLNKEVMRGCIIHKIIPAIKAKWPDWASKEIYIQQDNATPH 301 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4272.10932.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4272.10932.1 >prot_H-paniculata_contig4272.10932.1 ID=prot_H-paniculata_contig4272.10932.1|Name=mRNA_H-paniculata_contig4272.10932.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=162bp ITPLLSFDHKKNRVDLMLDQISHDRKTFKTGLHSINVNEAWFYLTRDKGKback to top mRNA from alignment at H-paniculata_contig4272:2705..3190+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4272.10932.1 ID=mRNA_H-paniculata_contig4272.10932.1|Name=mRNA_H-paniculata_contig4272.10932.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=486bp|location=Sequence derived from alignment at H-paniculata_contig4272:2705..3190+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4272:2705..3190+ >mRNA_H-paniculata_contig4272.10932.1 ID=mRNA_H-paniculata_contig4272.10932.1|Name=mRNA_H-paniculata_contig4272.10932.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=972bp|location=Sequence derived from alignment at H-paniculata_contig4272:2705..3190+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |