prot_H-paniculata_contig42709.10926.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig42709.10926.1
Unique Nameprot_H-paniculata_contig42709.10926.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length126
Homology
BLAST of mRNA_H-paniculata_contig42709.10926.1 vs. uniprot
Match: A0A6H5JVF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVF6_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 4.910e-19
Identity = 50/134 (37.31%), Postives = 70/134 (52.24%), Query Frame = 0
Query:    6 RFIQLSCLVAPGLGRNLFSVKQAARNGVTSIFDMDNPRLEANNFTLPLQELASD------LYSFSLDL-------TSGWNAPELAMQAAADVTLWHRWLGNLNRKSLDLLKKRDHNGVSFDAAVPDCDVCVVGK 126
            R +    ++ PGLG NLFSV  A   G+ ++F  DNPRLE+ +   P+Q L  D      +YS  + L       T   +AP+          LWHR +G +N KSLD+L+K+  N V +   V DC VC +GK
Sbjct:  662 RHVSFRVILVPGLGTNLFSVTLAMLKGMATLFHPDNPRLESRDVVFPMQTLGVDATTGKRIYSIEVKLGGEPEGPTILGDAPDALALKVESADLWHRRMGRINGKSLDVLRKKQVNSVDYTGDVKDCSVCPLGK 795          
BLAST of mRNA_H-paniculata_contig42709.10926.1 vs. uniprot
Match: A0A6H5J9Q7_9PHAE (gag_pre-integrs domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Q7_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 3.140e-18
Identity = 50/134 (37.31%), Postives = 70/134 (52.24%), Query Frame = 0
Query:    6 RFIQLSCLVAPGLGRNLFSVKQAARNGVTSIFDMDNPRLEANNFTLPLQELASD------LYSFSLDL-------TSGWNAPELAMQAAADVTLWHRWLGNLNRKSLDLLKKRDHNGVSFDAAVPDCDVCVVGK 126
            R +    ++ PGLG NLFSV  A   GV ++F  DNPRLE+ +   P+Q L  D      +YS  + L       T   +AP+          LWHR +G++N K+LD+L+K   NGV +   V  C VC +GK
Sbjct:  409 RHVSFRVILVPGLGTNLFSVTLAMLKGVATLFHPDNPRLESGDVVFPMQTLGVDATTGKRIYSIEVKLGGEPEGPTVLGDAPDALALKVESADLWHRRMGHINGKNLDVLRKEQVNGVDYIGDVKYCSVCPLGK 542          
BLAST of mRNA_H-paniculata_contig42709.10926.1 vs. uniprot
Match: A0A6H5KDX9_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX9_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 5.050e-17
Identity = 48/135 (35.56%), Postives = 70/135 (51.85%), Query Frame = 0
Query:    5 QRFIQLSCLVAPGLGRNLFSVKQAARNGVTSIFDMDNPRLEANNFTLPLQELASD------LYSFSLDL-------TSGWNAPELAMQAAADVTLWHRWLGNLNRKSLDLLKKRDHNGVSFDAAVPDCDVCVVGK 126
            +R +    ++ PG G NLFSV  A   GV ++F  DN RL++ +   P+Q L  D      +YS  + L       T   +AP+          LWHR +G++N KSLD+L+K   +GV +   V DC VC +GK
Sbjct:  351 ERHVLFRVILVPGPGTNLFSVTLAMLKGVATLFHPDNTRLDSGDVVFPMQTLGVDATTGKRIYSIEVKLGREPGGPTVLGDAPDALALKVESADLWHRHMGHINGKSLDVLRKEPVHGVDYTGDVKDCSVCPLGK 485          
BLAST of mRNA_H-paniculata_contig42709.10926.1 vs. uniprot
Match: A0A6H5JKW9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKW9_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 1.820e-16
Identity = 46/121 (38.02%), Postives = 67/121 (55.37%), Query Frame = 0
Query:    6 RFIQLSCLVAPGLGRNLFSVKQAARNGVTSIFDMDNPRLEANNFTLPLQELASDLYSFSLDLTSGWNAPELAMQAAADVTLWHRWLGNLNRKSLDLLKKRDHNGVSFDAAVPDCDVCVVGK 126
            R +    ++ PGLG  LFSV  A   GV ++   DN RLE+ +   P+Q L        +D T+G     + +++A    LWHR +G++N KSLD+L+K   NGV +   V DC VC +GK
Sbjct:  573 RHVSFCVVLVPGLGTKLFSVTLAMLKGVATLCHPDNHRLESGDVVFPMQTLG-------VDATTGKRIYSIEVESA---DLWHRRMGHINGKSLDVLRKEPVNGVDYTGDVKDCSVCPLGK 683          
BLAST of mRNA_H-paniculata_contig42709.10926.1 vs. uniprot
Match: A0A6H5KXM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXM1_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 6.160e-16
Identity = 48/121 (39.67%), Postives = 64/121 (52.89%), Query Frame = 0
Query:   19 GRNLFSVKQAARNGVTSIFDMDNPRLEANNFTLPLQELASD------LYSFSLDL-------TSGWNAPELAMQAAADVTLWHRWLGNLNRKSLDLLKKRDHNGVSFDAAVPDCDVCVVGK 126
            G NLFSV  A   GV ++F  DNPRLE+ +   P+Q L  D      +YS  + L       T   +AP+          LWHR +G++N KSLD+L+K   NGV +   V DC VC +GK
Sbjct:  208 GTNLFSVTLAMLKGVETLFHPDNPRLESGDVVFPMQTLGVDATTGKRIYSIEVKLGGEPGGPTVLGDAPDALALKVESADLWHRRMGHINGKSLDVLRKEPVNGVDYTGNVNDCCVCPLGK 328          
BLAST of mRNA_H-paniculata_contig42709.10926.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 8.790e-16
Identity = 48/134 (35.82%), Postives = 72/134 (53.73%), Query Frame = 0
Query:    6 RFIQLSCLVAPGLGRNLFSVKQAARNGVTSIFDMDNPRLEANNFTLPLQELASD-----LYSFSLDL--------TSGWNAPELAMQAAADVTLWHRWLGNLNRKSLDLLKKRDHNGVSFDAAVPDCDVCVVGK 126
            R +    ++ PGLG NLFSV  A  NGV S+F  DNPRLE+ +  +P++    D       S ++ L        T G     LA++      LWHR +G++N KSLD+L+++  +G+ +   V DC  C +GK
Sbjct:  483 RRVSFRVMLVPGLGNNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLALRVET-ADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGK 615          
BLAST of mRNA_H-paniculata_contig42709.10926.1 vs. uniprot
Match: A0A6H5KJN3_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN3_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 1.600e-15
Identity = 48/134 (35.82%), Postives = 72/134 (53.73%), Query Frame = 0
Query:    6 RFIQLSCLVAPGLGRNLFSVKQAARNGVTSIFDMDNPRLEANNFTLPLQELASD-----LYSFSLDL--------TSGWNAPELAMQAAADVTLWHRWLGNLNRKSLDLLKKRDHNGVSFDAAVPDCDVCVVGK 126
            R +    ++ PGLG NLFSV  A  NGV S+F  DNPRLE+ +  +P++    D       S ++ L        T G     LA++      LWHR +G++N KSLD+L+++  +G+ +   V DC  C +GK
Sbjct:  483 RQVSFRVVLVPGLGTNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLALRVET-ADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGK 615          
BLAST of mRNA_H-paniculata_contig42709.10926.1 vs. uniprot
Match: A0A6H5JYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB5_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 1.600e-15
Identity = 48/134 (35.82%), Postives = 72/134 (53.73%), Query Frame = 0
Query:    6 RFIQLSCLVAPGLGRNLFSVKQAARNGVTSIFDMDNPRLEANNFTLPLQELASD-----LYSFSLDL--------TSGWNAPELAMQAAADVTLWHRWLGNLNRKSLDLLKKRDHNGVSFDAAVPDCDVCVVGK 126
            R +    ++ PGLG NLFSV  A  NGV S+F  DNPRLE+ +  +P++    D       S ++ L        T G     LA++      LWHR +G++N KSLD+L+++  +G+ +   V DC  C +GK
Sbjct:  388 RQVSFRVVLVPGLGTNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLALRVET-ADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGK 520          
BLAST of mRNA_H-paniculata_contig42709.10926.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 3.030e-15
Identity = 47/129 (36.43%), Postives = 70/129 (54.26%), Query Frame = 0
Query:   11 SCLVAPGLGRNLFSVKQAARNGVTSIFDMDNPRLEANNFTLPLQELASD-----LYSFSLDL--------TSGWNAPELAMQAAADVTLWHRWLGNLNRKSLDLLKKRDHNGVSFDAAVPDCDVCVVGK 126
            +C + PGLG NLFSV  A  NGV S+F  DNPRLE+ +  +P++    D       S ++ L        T G     L ++      LWHR +G++N KSLD+L+++  +G+ +   V DC  C +GK
Sbjct:  610 ACPLVPGLGTNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLPLRVET-ADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGK 737          
BLAST of mRNA_H-paniculata_contig42709.10926.1 vs. uniprot
Match: A0A6H5JH28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH28_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 3.910e-15
Identity = 46/126 (36.51%), Postives = 65/126 (51.59%), Query Frame = 0
Query:    6 RFIQLSCLVAPGLGRNLFSVKQAARNGVTSIFDMDNPRLEANNFTLPLQELASD------LYSFSLDL-------TSGWNAPELAMQAAADVTLWHRWLGNLNRKSLDLLKKRDHNGVSFDAAVPD 118
            R +    ++ PGLG NLFSV  A   GV ++F  DNPRLE+ +   P+Q L  D      ++S  + L       T   +AP+          LWHR +G++N KSLD+L+K   NGV +   V D
Sbjct:  449 RHVSFRVILVPGLGTNLFSVTLATLKGVATLFHPDNPRLESGDVVFPMQTLGVDATTGKRIHSIEVKLGGEPGGPTVLGDAPDALALKVESADLWHRRMGHINGKSLDVLRKEPVNGVDYTGDVKD 574          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42709.10926.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JVF6_9PHAE4.910e-1937.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9Q7_9PHAE3.140e-1837.31gag_pre-integrs domain-containing protein n=1 Tax=... [more]
A0A6H5KDX9_9PHAE5.050e-1735.56CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JKW9_9PHAE1.820e-1638.02Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KXM1_9PHAE6.160e-1639.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J842_9PHAE8.790e-1635.82Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KJN3_9PHAE1.600e-1535.82Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JYB5_9PHAE1.600e-1535.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJH6_9PHAE3.030e-1536.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JH28_9PHAE3.910e-1536.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig42709contigH-paniculata_contig42709:570..947 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig42709.10926.1mRNA_H-paniculata_contig42709.10926.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig42709 570..947 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig42709.10926.1 ID=prot_H-paniculata_contig42709.10926.1|Name=mRNA_H-paniculata_contig42709.10926.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=126bp
GDEVQRFIQLSCLVAPGLGRNLFSVKQAARNGVTSIFDMDNPRLEANNFT
LPLQELASDLYSFSLDLTSGWNAPELAMQAAADVTLWHRWLGNLNRKSLD
LLKKRDHNGVSFDAAVPDCDVCVVGK
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