prot_H-paniculata_contig4270.10922.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4270.10922.1
Unique Nameprot_H-paniculata_contig4270.10922.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length88
Homology
BLAST of mRNA_H-paniculata_contig4270.10922.1 vs. uniprot
Match: A0A6H5KKG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKG4_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 2.300e-6
Identity = 31/70 (44.29%), Postives = 45/70 (64.29%), Query Frame = 0
Query:    1 MTVESSGDAGVIPVTVPTASVDNISLGGLTPYNTEVYGSDTTYYFTTGSAPSPA---SKPNASELAPISI 67
            +T  S   AG++P+TVPTAS  +I   GL+  +TE YG+DTTYY     A + +   +KP+ASELA + +
Sbjct:   46 LTYVSGSGAGLVPLTVPTASAASIPTTGLSIQDTETYGTDTTYYLKDDDASTVSRVGAKPDASELAEVPL 115          
BLAST of mRNA_H-paniculata_contig4270.10922.1 vs. uniprot
Match: D7FLJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ3_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 4.000e-6
Identity = 31/66 (46.97%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    5 SSGDAGVIPVTVPTASVDNISLGGLTPYNTEVYGSDTTYYFTTGSA---PSPASKPNASELAPISI 67
            S   AG++P+TVPTAS  +I   GL+  +TE YG+DTTYY     A   P   +KP+ASELA + +
Sbjct:  924 SGSGAGLVPLTVPTASAASIPTTGLSIEDTETYGTDTTYYLKDDDASTVPRVGTKPDASELAEVPL 989          
BLAST of mRNA_H-paniculata_contig4270.10922.1 vs. uniprot
Match: A0A6H5JW45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW45_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 5.330e-6
Identity = 35/74 (47.30%), Postives = 46/74 (62.16%), Query Frame = 0
Query:    1 MTVESSGDAGVIPVTVPTASVDNISLGGLTPYNTEVYGSDTTYYFTTGSA---PSPASKPNASELAPI-SIVAE 70
            +T  S   AG++P+TVPTAS  +I    L+  +TE YG+DTTYY     A   P   +KP+ASELA + SIV E
Sbjct:  500 LTYVSGSGAGLVPLTVPTASAASIPTTDLSIQDTETYGTDTTYYLKDDDASTVPRVGTKPDASELAEVPSIVVE 573          
BLAST of mRNA_H-paniculata_contig4270.10922.1 vs. uniprot
Match: A0A6H5JPQ4_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPQ4_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 5.470e-6
Identity = 31/70 (44.29%), Postives = 45/70 (64.29%), Query Frame = 0
Query:    1 MTVESSGDAGVIPVTVPTASVDNISLGGLTPYNTEVYGSDTTYYFTTGSAPSPA---SKPNASELAPISI 67
            +T  S   AG++P+TVPTAS  +I   GL+  +TE YG+DTTYY     A + +   +KP+ASELA + +
Sbjct:  947 LTYVSGSGAGLVPLTVPTASAASIPTTGLSIQDTETYGTDTTYYLKDDDASTVSRVGAKPDASELAEVPL 1016          
BLAST of mRNA_H-paniculata_contig4270.10922.1 vs. uniprot
Match: D7FLI7_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI7_ECTSI)

HSP 1 Score: 50.4 bits (119), Expect = 3.540e-5
Identity = 29/64 (45.31%), Postives = 40/64 (62.50%), Query Frame = 0
Query:    5 SSGDAGVIPVTVPTASVDNISLGGLTPYNTEVYGSDTTYYFTTGSA---PSPASKPNASELAPI 65
            S   AG++P+TVPTAS  +I   GL+  +TE YG+DTTYY     A   P   +KP+A +LA +
Sbjct:  751 SGSGAGLVPLTVPTASAASIPTTGLSIQDTETYGTDTTYYLKDDDASTVPRVGTKPDAGDLAEV 814          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4270.10922.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KKG4_9PHAE2.300e-644.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLJ3_ECTSI4.000e-646.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JW45_9PHAE5.330e-647.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPQ4_9PHAE5.470e-644.29WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FLI7_ECTSI3.540e-545.31WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4270contigH-paniculata_contig4270:11906..13563 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4270.10922.1mRNA_H-paniculata_contig4270.10922.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4270 11874..13563 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4270.10922.1 ID=prot_H-paniculata_contig4270.10922.1|Name=mRNA_H-paniculata_contig4270.10922.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=88bp
MTVESSGDAGVIPVTVPTASVDNISLGGLTPYNTEVYGSDTTYYFTTGSA
PSPASKPNASELAPISIVAEDSMPVPEDAQEEAVKKTD
back to top