mRNA_H-paniculata_contig427.10920.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig427.10920.1
Unique NamemRNA_H-paniculata_contig427.10920.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig427.10920.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 3.820e-62
Identity = 133/332 (40.06%), Postives = 183/332 (55.12%), Query Frame = 1
Query:   37 GMVHANPQARFGSVAMAVPPKNTYRMLADYRAVNSLIAPSAMPMSNLEEIGREIAGASVFCTLDLSQG*WQVPLSQKAQKHFTMVTASGVHTPTRVTQGVLNAVSYCQGTTGNVLEGLPGKNGEVWVDDIGIWACN*QELMQRLRMVLDGHQGKRL---------FRREMRWCGKIFSEVNVSHDPELVQGLTTMRRPELAGGLMQFLDTVNWMRTASLE-------LTVVMKSATGHAAGIFEKQAPNTHWAA---------AWERATRKMGEVVPLYHPREDRHILIFSDASDELGRSCVTQVPPEEVNAGGPVADISHEPLHFLARTSK 957
            G+V  N QA + S AMA P K  YR+++D+RA N  +      M N E    +++ A  + +LDL Q  WQ PL+ +AQ+ FT+ T  G++TP RV QG+LNA SY Q T   +L+GL   N  VWVDD+  W  +  +L+  L ++LD  +G  L         F   + WCGK++SE  V HDPE + GL TMRRPE AG LMQFL  VNW+RT+          L V ++     A    ++ A N   AA         AW  A   +   V L HP     +L+F DASDE   S +TQVP ++++ G PV D++HEP+ FL+ T K
Sbjct:  787 GLVFLNMQAVWASAAMATPKKGGYRLVSDFRAANKQVEKVPGVMPNPEASIAQLSAAKFYGSLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQGILNATSYFQATLTRILDGL---NCFVWVDDVVYWGMDKDDLLDTLDLILDRLEGAGLYVAAHKCTFFETSITWCGKVYSEGQVEHDPERLSGLATMRRPETAGELMQFLQAVNWLRTSLPRMAEVVWPLRVFLEQHLVGAKSRTKRVAENRAIAADALTPALVEAWTAAQDLVARAVALSHPSPGCAVLMFPDASDEHWGSFLTQVPQDQLDRGVPVEDMAHEPMGFLSGTFK 1115          
BLAST of mRNA_H-paniculata_contig427.10920.1 vs. uniprot
Match: A0A6H5L028_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L028_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 5.450e-49
Identity = 128/346 (36.99%), Postives = 172/346 (49.71%), Query Frame = 1
Query:    1 WLRDHFQRLQKAGMVHANPQARFGSVAMAVPP------KNTYRMLADYRAVNSLIAPSAMPMSNLEEIGREIAGASVFCTLDLSQG*WQVPLSQKAQKHFTMVTASGVHTPTRVTQGVLNAVSYCQGTTGNVLEGLPGKNGEVWVDDIGIWACN*QELMQRLRMVLDGHQGKRLFRR---------EMRWCGKIFSEVNVSHDPELVQGLTTMRRPELAGGLMQFLDTVNWMRTASLELTVVMK-----------SATGHAAGIFEKQAPNTH-WAA----AWERATRKMGEVVPLYHPREDRHILIFSDASDELGRSCVTQVPPEEVNAGGPVADISHEPLHFLA 945
            WL      L   GMV    QA + S AM VP       +  YR+  DY   N       + + + E     + GA+ F  LDL QG WQ+PL++ A++ F++ T  G+  PTRV Q VLNA  Y Q     +L+GL   N  VWVDD   W  +  +L+  L  +L   Q   +F           ++RWCGK++S   V+ DPE +QGLT MRRPE AG LMQFL  V W+RT+   L  VM+           SA      I   +A     W A    AW  A   +   V L HP++   +L+F DAS+E   S +TQVP EE+  G  V  ++HEPL FL+
Sbjct:  422 WLSGCMAALVAMGMVVKTIQAVWASPAMTVPKPGRVGREGEYRLGNDYLRANLQCEKVPIVVPSQEVQVSMLQGATCFGKLDLLQGYWQMPLAESAREIFSIATPEGLFEPTRVPQDVLNATGYFQAVMTEILQGL---NCAVWVDDDIWWGIDETDLLNTLDEILWRLQDNGIFAAAHKCPFFDTKIRWCGKVYSGGQVASDPERLQGLTDMRRPETAGKLMQFLQAVKWLRTSLSRLAEVMEPVRTLLEVNMASAPRQTKSIAPNRAIKCEAWTAGMVEAWISAQDLVAHAVALSHPKDGFAVLMFPDASEEHWGSFLTQVPQEELERGVSVEHMTHEPLAFLS 764          
BLAST of mRNA_H-paniculata_contig427.10920.1 vs. uniprot
Match: A0A6A4Z9B8_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z9B8_9STRA)

HSP 1 Score: 180 bits (457), Expect = 1.260e-46
Identity = 114/344 (33.14%), Postives = 175/344 (50.87%), Query Frame = 1
Query:    1 WLRDHFQRLQKAGMVHANPQARFGSVAMAV--PPKNTYRMLADYRAVNSLIAPSAMPMSNLEEIGREIAGASVFCTLDLSQG*WQVPLSQKAQKHFTMVTASGVHTPTRVTQGVLNAVSYCQGTTGNVLEGLPGKNGEVWVDDIGIWACN*QELMQRLRMVLDGHQGK---------RLFRREMRWCGKIFSEVNVSHDPELVQGLTTMRRPELAGGLMQFLDTVNWMRTASLELTVVM-----------KSATGH-----AAGIFEKQAPNTHWAAAWERATRKMGEVVPLYHPREDRHILIFSDASDELGRSCVTQVPPEEVNAGGPVADISHEPLHFLART 951
            ++  H + LQ AG+ + NP++++ S  + V  P  N +RM  D R VN+       PM  LE I   +AGASVF TLD  +G WQ  L + +Q+ F+ +T +GV+TPTRV  G  ++V+YCQ +   + +    ++  +W+DD+  +  + + L+  L  VL   + +         R F  E RWCG+I S   V HDPE ++ L  ++ P     L QF+  +NWMR +  +  V++           K+A GH     A  +      N    A        +G VV L HP+ +R I +F+DASD      VTQ+P ++V+      D  HEPL FL+ T
Sbjct:  769 FMAKHVEELQAAGLCYRNPRSKWCSAPLIVKKPEANDFRMTVDVRPVNAQTERIIWPMPMLEVILDHLAGASVFFTLDFFKGYWQFALDEASQEMFSFLTDTGVYTPTRVLMGGTDSVAYCQSSVQEMFQDELYRSLLIWLDDLLGYDKSKEGLLAALERVLAICESRGLKLNPKKCRFFETEARWCGRILSSEGVKHDPERIKALQDLKMPVTGQDLQQFICAMNWMRMSIPKYNVIVQPITDLLESVYKAAGGHTRQKVAEVVLADVGWNAEHVACLTSCKDALGRVVTLAHPKPERLICVFADASDLHWGGVVTQIPHDQVDRELDAQD--HEPLMFLSGT 1110          
BLAST of mRNA_H-paniculata_contig427.10920.1 vs. uniprot
Match: A0A6G0XEE8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XEE8_9STRA)

HSP 1 Score: 171 bits (434), Expect = 1.540e-43
Identity = 111/344 (32.27%), Postives = 173/344 (50.29%), Query Frame = 1
Query:    1 WLRDHFQRLQKAGMVHANPQARFGSVAMAV--PPKNTYRMLADYRAVNSLIAPSAMPMSNLEEIGREIAGASVFCTLDLSQG*WQVPLSQKAQKHFTMVTASGVHTPTRVTQGVLNAVSYCQGTTGNVLEGLPGKNGEVWVDDIGIWACN*QELMQRLRMVLDGHQGKRL---------FRREMRWCGKIFSEVNVSHDPELVQGLTTMRRPELAGGLMQFLDTVNWMRTASLELTVVMKSATGHAAGIF--------EKQAPNTHWAAAWERA--------TRKMGEVVPLYHPREDRHILIFSDASDELGRSCVTQVPPEEVNAGGPVADISHEPLHFLART 951
            ++  H   LQ AG+ + NP++++ S  + V  P  N +RM  D R VN+       PM  LE I   + GA VF TLD  +G WQ  L   +Q+ F+ +T  G++TPTRVT G  ++V+YCQ +   +      +   +W++D+  ++   + L+  L  VL   + +RL         ++ E RWCG+I S   V HDPE ++ L  ++ P     L QF+  +NWMR +     VV+K  T     I+        +K A      A W  +         + +G+ V L HP+ D+ + +F+DASD    + VTQ+PPE+  A   +    HEPL FL+ T
Sbjct:  740 FMAKHVDELQAAGLCYRNPRSKWCSAPLIVKKPEANEFRMTVDVRPVNAQTERILWPMPMLEVILDHLCGAQVFFTLDFFKGYWQFALHPDSQEMFSFLTDIGLYTPTRVTMGGTDSVAYCQSSVQEMFADELYRCLLIWINDLLGYSKTKEGLLAALERVLKICEFRRLKLNPKKCRFYQTEARWCGRIVSGDGVKHDPERIKALQDLKVPVTGQDLQQFICAMNWMRMSIPRYNVVVKPLTDLMEKIYALAGGRTRQKVAKIKLSEAGWNASHVNCLTTCKKVLGQAVTLAHPKSDKLVCVFADASDLHWGAVVTQIPPEK--ADRELDAQEHEPLMFLSGT 1081          
BLAST of mRNA_H-paniculata_contig427.10920.1 vs. uniprot
Match: A0A6G0WDP6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDP6_9STRA)

HSP 1 Score: 169 bits (427), Expect = 1.230e-42
Identity = 109/344 (31.69%), Postives = 169/344 (49.13%), Query Frame = 1
Query:    1 WLRDHFQRLQKAGMVHANPQARFGSVAMAV--PPKNTYRMLADYRAVNSLIAPSAMPMSNLEEIGREIAGASVFCTLDLSQG*WQVPLSQKAQKHFTMVTASGVHTPTRVTQGVLNAVSYCQGTTGNVLEGLPGKNGEVWVDDIGIWACN*QELMQRLRMVLDGHQGK---------RLFRREMRWCGKIFSEVNVSHDPELVQGLTTMRRPELAGGLMQFLDTVNWMRTASLELTVVMKSATGHAAGIFEKQAPNTHWAAAWERAT----------------RKMGEVVPLYHPREDRHILIFSDASDELGRSCVTQVPPEEVNAGGPVADISHEPLHFLART 951
            ++  +   LQ AG+ + NP++++ S  + V  P  N +RM  D R VN+       PM  LE I   + GA VF TLD  +G WQ  L   +Q+ F+ +T  GV+TPTRV  G  ++V+YCQ +   +      +  ++W+DD+  ++   + L+  L  VL   + +         R ++ E RWCG+I S   V HDPE ++ L  ++ P     L QF+  +NWMR +     VV+K  T     I+      T    A  R +                + +G+ V L HP+ D+ + +F+DASD      VTQ+PPE+  A   +    HEPL FL+ T
Sbjct:  690 FMAKYVDELQAAGLCYRNPRSKWCSAPLIVKKPEANEFRMTVDVRPVNAQTERILWPMPMLEVILDHLCGAQVFFTLDFFKGYWQFALHPDSQEMFSFLTDIGVYTPTRVLMGGTDSVAYCQSSVQEMFADELYRCLQIWLDDLLGYSKTKEGLLAALERVLKICEFRGLKLNPKKCRFYQTEARWCGRIVSGDGVKHDPERIKVLQDLKVPVTGQDLQQFICAMNWMRMSIPRYNVVVKPLTDPMEKIYALAGGRTRQKVAKIRLSEVGWNASHVDCLTSCKKALGQAVTLAHPKSDKLVCVFADASDLHWGGVVTQIPPEQ--ADRELDAQEHEPLMFLSGT 1031          
BLAST of mRNA_H-paniculata_contig427.10920.1 vs. uniprot
Match: A0A0G4J790_PLABS (Reverse transcriptase domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J790_PLABS)

HSP 1 Score: 166 bits (421), Expect = 4.720e-42
Identity = 104/349 (29.80%), Postives = 175/349 (50.14%), Query Frame = 1
Query:    1 WLRDHFQRLQKAGMVHANPQARFGSVAMAVPPKNT--YRMLADYRAVNSLIAPSAMPMSNLEEIGREIAGASVFCTLDLSQG*WQVPLSQKAQKHFTMVTASGVHTPTRVTQGVLNAVSYCQGTTGNVLEGLPGKNGEVWVDDIGIWACN*QELMQRLRMVLDGHQGKRL---------FRREMRWCGKIFSEVNVSHDPELVQGLTTMRRPELAGGLMQFLDTVNWMRT------------------ASLELTVVMKSATG----HAAGIFEKQAPNTHWAAAWERATRKMGEVVPLYHPREDRHILIFSDASDELGRSCVTQVPPEEVNAGGPVADISHEPLHFLAR 948
            +L +  + L +  +++ N  +R+ S  + V   N   YR+  D R VNS   P+A PM N+E   R++AG + F T+D  +G W +P++++ Q+ F+ +T  GV+TPTR  QG  N+    Q   G + + +   +  +W+DD+  +A     L+ +L  VL+  + + L         F RE++WCG+I+S   + HDPE ++ LT+M RP     L QF+   NWMRT                  A+ E+  +  S+      H  G  ++       + A+E     + + V L +P+ D    +F+DASD      +TQ+P E+++   PV +  HEPL F  +
Sbjct:  323 FLDEMIKMLLENNLIYLNMNSRWASPVLVVKKPNGKGYRLCVDLRQVNSRTVPTAWPMPNIEAASRKLAGMTCFFTIDAHKGFWLMPIAKECQEIFSFMTDDGVYTPTRSIQGATNSALQFQARIGKIFDDMK-DHLLIWIDDLLGFAKTEDILLHQLARVLERARERNLKFNPDKCVLFARELKWCGRIYSRDGIRHDPERIEALTSMPRPNTFKELQQFIWAANWMRTSVPGYAYIIAPLQELTDKANEEMKRIQSSSPSSIRLHDLGWTDRH------SKAFEDIRFALIQHVQLAYPKSDHQTCLFTDASDLAWAPVITQIPREDIDL--PVHEQRHEPLAFYGK 662          
BLAST of mRNA_H-paniculata_contig427.10920.1 vs. uniprot
Match: A0A6G0XU41_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XU41_9STRA)

HSP 1 Score: 167 bits (422), Expect = 5.540e-42
Identity = 109/344 (31.69%), Postives = 166/344 (48.26%), Query Frame = 1
Query:    1 WLRDHFQRLQKAGMVHANPQARFGSVAMAV--PPKNTYRMLADYRAVNSLIAPSAMPMSNLEEIGREIAGASVFCTLDLSQG*WQVPLSQKAQKHFTMVTASGVHTPTRVTQGVLNAVSYCQGTTGNVLEGLPGKNGEVWVDDIGIWACN*QELMQRLRMVLDGHQGK---------RLFRREMRWCGKIFSEVNVSHDPELVQGLTTMRRPELAGGLMQFLDTVNWMRTASLELTVVMKSATGHAAGIFEKQAPNTHWAAAWERAT----------------RKMGEVVPLYHPREDRHILIFSDASDELGRSCVTQVPPEEVNAGGPVADISHEPLHFLART 951
            ++  H   LQ AG+ + NP+++  S  + V  P  N +RM  D R  N+       PM  LE I   + GA VF TLD  +G WQ  L   +Q+ F+ +T  GV+TPTRV  G  ++V+YCQ +   +      +   +W+DD+  ++   + L+  L  VL   + +         R ++ E RWCG+I S   V HDPE ++ L  ++ P     L QF+  +NWMR +     VV+K  T     I+      T    A  R +                + +G+ V   HP+ D+ +L+F+DASD      VTQ+PPE+  A   +    HEPL FL+ T
Sbjct:  610 FMAKHVDELQAAGLCYRNPRSKRCSAPLIVKKPEANEFRMTVDVRPANAQTERILWPMPMLEVILDHLCGAQVFFTLDFFKGYWQFALHPDSQEMFSFLTDIGVYTPTRVLMGGTDSVAYCQSSVQEMFADELYRCLLIWLDDLLGYSKTKEGLLAALERVLKICEFRGLQLNPKKCRFYQTEARWCGRIVSGNGVKHDPERIKALQDLKVPVTGQDLQQFICAMNWMRMSIPRYNVVVKPLTDLMEKIYALAGGRTRQKVAKIRLSEVGWNASHVDCLTSCKKALGQAVTFAHPKSDKLVLLFADASDLHWGGVVTQIPPEQ--ADRELDAQEHEPLMFLSGT 951          
BLAST of mRNA_H-paniculata_contig427.10920.1 vs. uniprot
Match: A0A024UI62_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UI62_9STRA)

HSP 1 Score: 154 bits (388), Expect = 1.700e-37
Identity = 103/341 (30.21%), Postives = 167/341 (48.97%), Query Frame = 1
Query:    1 WLRDHFQRLQKAGMVHANPQARFGSVAMAVPPKNT---YRMLADYRAVNSLIAPSAMPMSNLEEIGREIAGASVFCTLDLSQG*WQVPLSQKAQKHFTMVTASGVHTPTRVTQGVLNAVSYCQGTTGNVLEGLPGKNGEVWVDDIGIWACN*QELMQRLRMVLD--GHQGKRL-------FRREMRWCGKIFSEVNVSHDPELVQGLTTMRRPELAGGLMQFLDTVNWMRTASLELTVVMKSATGHAAGIFEKQAPNTHWAAAWERATRKMGEVVPLYHPREDRHILIFSDASDELGRSCVTQVPPEEVNAGGPVADISHEPLHFLARTSKDHK*GGQWRI 987
            ++  H + L+KAG+++ NP +R+    + V   +T   +RM  D   VNS     A PM  LE +   + GA+ F  LD  +G WQ  L +  Q+ F+ +T +GV+T TRV QG  ++V+YCQ T   +      +    W+DD+  +      L+  L  VL+    +G +L       + +E +WCG+I S   V HDP  V+ L  +  P+    L  + +     +      TV++     +          +TH  AA E     + +VV   HP+ D+ + +F+DAS+E   + +TQVPP+++    P+   SHEPL FL+ T       G+W I
Sbjct:  249 FMHKHVEELEKAGVIYRNPTSRWACAPLIVRKPHTKDEFRMTVDLHPVNSQTEQIAWPMPMLEIVVDHLRGATCFFILDFFKGYWQFSLDKSCQEMFSFLTDTGVYTSTRVMQGGSDSVAYCQSTVQAMFAEQLYRCLLAWLDDLLGYHKTPTGLLSALAEVLEVCAKRGLKLHPKKCQFYAKEAKWCGRIISGTGVKHDPARVEALQQLSEPKTGADLQHWWEAY---QAVGSYCTVLLADVGWN----------DTH-TAALEATKMALAKVVEPSHPKPDKRLCVFADASEEHWGAVITQVPPDQLER--PLEAQSHEPLMFLSGTFTGS--AGRWAI 571          
BLAST of mRNA_H-paniculata_contig427.10920.1 vs. uniprot
Match: A0A2P4Y2Z2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y2Z2_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.140e-20
Identity = 69/220 (31.36%), Postives = 103/220 (46.82%), Query Frame = 1
Query:   37 GMVHANPQARFGSVAMAVPP---KNTYRMLADYRAVNSLIAPSAMPMSNLEEIGREIAGASVFCTLDLSQG*WQVPLSQKAQKHFTMVTASGVHTPTRVTQGVLNAVSYCQGTTGNVLEGLPGKNGEVWVDDIGIWACN*QELMQRLRMVLDGHQGKRLFRREMRWCGKIFSEVNVSHDPELVQGLTTMRRPELAGGLMQFLDTVNWMRTASLELTVVMK 687
            G +  N  + +   A+ VP     N +R+  DYR VN++  P A   S+L      +AGA  F   D+  G  Q+PL+  +Q   + +T  GV TP+RV QG ++               L  +N    V + G+          +L  V        LFR+E +WCG++FS V V HDPE + GL  +  P  A  L QFL    WMR + ++ + VM+
Sbjct:    2 GYIRRNNMSVWACAAVPVPKVNRPNEFRLTNDYRPVNAVTVPIAGTGSDLTSSSENVAGAYGFAGFDMPSGFSQLPLADDSQGSMSFITDEGVWTPSRVPQGAMDPP-------------LHFRNQMNVVRERGL----------KLSAVKSF-----LFRKEAKWCGRLFSGVGVRHDPERLSGLHQLPLPSTAADLQQFLCATGWMRDSLMDYSRVMQ 193          
BLAST of mRNA_H-paniculata_contig427.10920.1 vs. uniprot
Match: A0A6G0X9E3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X9E3_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.170e-19
Identity = 73/249 (29.32%), Postives = 119/249 (47.79%), Query Frame = 1
Query:  280 FTMVTASGVHTPTRVTQGVLNAVSYCQGTTGNVLEGLPGKNGEVWVDDIGIWACN*QELMQRLRMVLDGHQ--GKRL-------FRREMRWCGKIFSEVNVSHDPELVQGLTTMRRPELAGGLMQFLDTVNWMRTASLELTVVMKSATGHAAGIFEKQAPNTHWA--------AAWE-------RATRK-MGEVVPLYHPREDRHILIFSDASDELGRSCVTQVPPEEVNAGGPVADISHEPLHFLART 951
            F+ +T  GV+TPTRV     ++V+YCQ +  ++      +   +W+DD+  ++   + L+  L  VL   +  G +L       ++   RWCG+  S   V HDPE ++ L  ++      GL QF+  +NWM T+     VV+         ++      T           A W+        A +K +G+ V L HP+ D+ + +F+DASD      VTQ+PPE+  A   +  + HEPL FL+ T
Sbjct:    2 FSFLTDIGVYTPTRVRMRGTDSVAYCQSSVQDMFADELYRCLLIWLDDLLGYSKTKEGLLAALERVLKICEFCGLKLNPKKCLFYQTGARWCGRNVSGDGVKHDPERIKALQDLKVLATGQGLQQFICAMNWMCTSIPRYNVVVGPLADLMERVYTLAGGRTRQKVSKIPLSEAGWDGSHVECLAACKKVLGQAVTLAHPKSDKLVCVFADASDLHWGGVVTQIPPEQ--ADRELDALQHEPLMFLSGT 248          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig427.10920.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5A5_9PHAE3.820e-6240.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L028_9PHAE5.450e-4936.99CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6A4Z9B8_9STRA1.260e-4633.14Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A6G0XEE8_9STRA1.540e-4332.27Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6G0WDP6_9STRA1.230e-4231.69Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A0G4J790_PLABS4.720e-4229.80Reverse transcriptase domain-containing protein n=... [more]
A0A6G0XU41_9STRA5.540e-4231.69Uncharacterized protein n=2 Tax=Aphanomyces euteic... [more]
A0A024UI62_9STRA1.700e-3730.21Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A2P4Y2Z2_9STRA1.140e-2031.36Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A6G0X9E3_9STRA1.170e-1929.32Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig427contigH-paniculata_contig427:36530..37669 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score89.7
Seed ortholog evalue1.4e-15
Seed eggNOG ortholog164328.Phyra85588
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QEWS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size1094
Cds size513
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig427.10920.1prot_H-paniculata_contig427.10920.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig427 36655..37213 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930298.2780728-UTR-H-paniculata_contig427:36529..366541622930298.2780728-UTR-H-paniculata_contig427:36529..36654Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig427 36530..36654 -
1691481230.891694-UTR-H-paniculata_contig427:36529..366541691481230.891694-UTR-H-paniculata_contig427:36529..36654Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig427 36530..36654 -
1622930298.3220067-UTR-H-paniculata_contig427:37213..376691622930298.3220067-UTR-H-paniculata_contig427:37213..37669Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig427 37214..37669 -
1691481230.918111-UTR-H-paniculata_contig427:37213..376691691481230.918111-UTR-H-paniculata_contig427:37213..37669Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig427 37214..37669 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930298.2902565-CDS-H-paniculata_contig427:36654..368851622930298.2902565-CDS-H-paniculata_contig427:36654..36885Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig427 36655..36885 -
1691481230.901236-CDS-H-paniculata_contig427:36654..368851691481230.901236-CDS-H-paniculata_contig427:36654..36885Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig427 36655..36885 -
1622930298.3067608-CDS-H-paniculata_contig427:36931..372131622930298.3067608-CDS-H-paniculata_contig427:36931..37213Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig427 36932..37213 -
1691481230.9086814-CDS-H-paniculata_contig427:36931..372131691481230.9086814-CDS-H-paniculata_contig427:36931..37213Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig427 36932..37213 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig427.10920.1

>prot_H-paniculata_contig427.10920.1 ID=prot_H-paniculata_contig427.10920.1|Name=mRNA_H-paniculata_contig427.10920.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=171bp
MQRLRMVLDGHQGKRLFRREMRWCGKIFSEVNVSHDPELVQGLTTMRRPE
LAGGLMQFLDTVNWMRTASLELTVVMKSATGHAAGIFEKQAPNTHWAAAW
ERATRKMGEVVPLYHPREDRHILIFSDASDELGRSCVTQVPPEEVNAGGP
VADISHEPLHFLARTSKDHK*
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mRNA from alignment at H-paniculata_contig427:36530..37669-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig427.10920.1 ID=mRNA_H-paniculata_contig427.10920.1|Name=mRNA_H-paniculata_contig427.10920.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1140bp|location=Sequence derived from alignment at H-paniculata_contig427:36530..37669- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGGCTGAGAGATCATTTTCAAAGGCTGCAGAAAGCTGGGATGGTCCACGC AAACCCGCAAGCAAGGTTTGGAAGCGTAGCGATGGCCGTTCCCCCAAAAA ACACCTACCGTATGCTCGCGGATTACCGCGCAGTCAACAGCTTGATCGCA CCCTCGGCTATGCCAATGTCGAATTTGGAGGAAATAGGGAGGGAGATTGC TGGAGCTAGCGTGTTCTGCACACTGGATTTGTCGCAGGGGTAGTGGCAAG TGCCATTGAGCCAGAAGGCACAAAAACACTTCACGATGGTCACGGCCAGC GGTGTGCACACGCCGACCCGTGTAACGCAAGGCGTGCTCAATGCTGTAAG TTATTGCCAGGGTACGACGGGCAACGTTTTGGAGGGACTGCCGGGGAAAA ATGGCGAAGTCTGGGTGGACGATATCGGGATATGGGCCTGTAATTAGCAA GAACTGATGCAACGGTTGCGGATGGTACTGGATGGGCATCAAGGTAAGCG ACTATTCCGGAGGGAGATGAGGTGGTGTGGAAAGATTTTCTCGGAGGTCA ATGTCTCTCATGACCCGGAACTAGTGCAAGGACTGACGACGATGCGCCGG CCGGAGCTGGCGGGAGGGTTAATGCAATTTCTGGATACAGTCAACTGGAT GCGGACGGCGTCGCTGGAGCTGACCGTGGTAATGAAATCCGCTACGGGAC ATGCTGCAGGAATTTTCGAAAAACAAGCGCCGAACACGGTGCGTGGCCCA CAAGCTCGAGATTAACCGAGAGGCATCGAGGGAGCACTGGGCAGCGGCGT GGGAGAGAGCGACTAGAAAAATGGGGGAAGTGGTGCCACTTTACCACCCG CGTGAGGACCGGCATATACTGATTTTTTCTGATGCAAGCGACGAACTTGG GAGAAGCTGCGTCACGCAGGTGCCGCCGGAAGAGGTGAATGCAGGCGGGC CCGTGGCGGACATAAGCCACGAGCCGCTGCATTTTTTAGCGAGGACTTCA AAGGATCACAAGTGAGGCGGCCAGTGGAGGATAAAGAGGCGTTTGCGATT GTGGCGACGCTCCTGCGGTTGCCATATCTGCTCTGGGACGGGGCTCGCAT TTTTTGCGACCATCGGGATCTGGCGTATGTTTTCCATCCG
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Coding sequence (CDS) from alignment at H-paniculata_contig427:36530..37669-

>mRNA_H-paniculata_contig427.10920.1 ID=mRNA_H-paniculata_contig427.10920.1|Name=mRNA_H-paniculata_contig427.10920.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1026bp|location=Sequence derived from alignment at H-paniculata_contig427:36530..37669- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCAACGGTTGCGGATGGTACTGGATGGGCATCAAGGTAAGCGACTATT
CCGGAGGGAGATGAGGTGGTGTGGAAAGATTTTCTCGGAGGTCAATGTCT
CTCATGACCCGGAACTAGTGCAAGGACTGACGACGATGCGCCGGCCGGAG
CTGGCGGGAGGGTTAATGCAATTTCTGGATACAGTCAACTGGATGCGGAC
GGCGTCGCTGGAGCTGACCGTGGTAATGAAATCCGCTACGGGACATGCTG
CAGGAATTTTCGAAAAACAAGCGCCGAACACGATGCAACGGTTGCGGATG
GTACTGGATGGGCATCAAGGTAAGCGACTATTCCGGAGGGAGATGAGGTG
GTGTGGAAAGATTTTCTCGGAGGTCAATGTCTCTCATGACCCGGAACTAG
TGCAAGGACTGACGACGATGCGCCGGCCGGAGCTGGCGGGAGGGTTAATG
CAATTTCTGGATACAGTCAACTGGATGCGGACGGCGTCGCTGGAGCTGAC
CGTGGTAATGAAATCCGCTACGGGACATGCTGCAGGAATTTTCGAAAAAC
AAGCGCCGAACACGCACTGGGCAGCGGCGTGGGAGAGAGCGACTAGAAAA
ATGGGGGAAGTGGTGCCACTTTACCACCCGCGTGAGGACCGGCATATACT
GATTTTTTCTGATGCAAGCGACGAACTTGGGAGAAGCTGCGTCACGCAGG
TGCCGCCGGAAGAGGTGAATGCAGGCGGGCCCGTGGCGGACATAAGCCAC
GAGCCGCTGCATTTTTTAGCGAGGACTTCAAAGGATCACAAGTGACACTG
GGCAGCGGCGTGGGAGAGAGCGACTAGAAAAATGGGGGAAGTGGTGCCAC
TTTACCACCCGCGTGAGGACCGGCATATACTGATTTTTTCTGATGCAAGC
GACGAACTTGGGAGAAGCTGCGTCACGCAGGTGCCGCCGGAAGAGGTGAA
TGCAGGCGGGCCCGTGGCGGACATAAGCCACGAGCCGCTGCATTTTTTAG
CGAGGACTTCAAAGGATCACAAGTGA
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