prot_H-paniculata_contig42684.10914.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig42684.10914.1
Unique Nameprot_H-paniculata_contig42684.10914.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length170
Homology
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BLAST of mRNA_H-paniculata_contig42684.10914.1 vs. uniprot
Match: D8LL51_ECTSI (APEX nuclease (Apurinic/apyrimidinic endonuclease) 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL51_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 1.420e-36
Identity = 73/159 (45.91%), Postives = 110/159 (69.18%), Query Frame = 0 
Query:    1 MDGLSLIGYAFKIGSDLVSRCELVEQCHIKSGRIALRTLRILGSLESARGEVSSNADLAASLIELKQALENANDIVERCKKPKGIRAKIVAGMRVPTLKKGLIKLETELERIMQDLNVPLLTDLRIAIRNLKKQGERDESDSQSAV-----AQSMRDAI 154
            MD ++L+ Y F++GS L+ RCELV+QCH +SGRIA+RT R+LG+L+ A  E S   +  ASL ELK+ LE A D+V RC+K +G+ AKI A M   +LK GL+++E +L+R   DL +P+LTD+R A++ + ++ E + + S S +      Q++RDAI
Sbjct:    1 MDAITLVAYTFEVGSSLLERCELVKQCHTESGRIAVRTARVLGALQKASNEFSCRMEFEASLRELKRVLEEARDLVSRCQKARGVGAKIGALMGANSLKAGLVRVERDLDRAAADLQIPMLTDIRRAVQCINER-ESEATASPSGIDAEMLEQAVRDAI 158
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BLAST of mRNA_H-paniculata_contig42684.10914.1 vs. uniprot
Match: D7FQW6_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW6_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 1.140e-20
Identity = 48/132 (36.36%), Postives = 81/132 (61.36%), Query Frame = 0 
Query:    1 MDGLSLIGYAFKIGSDLVSRCELVEQCHIKSGRIALRTLRILGSLESARGEVSSNADLAASLIELKQALENANDIVERCKKPKGIRAKIVAGMRVPTLKKGLIKLETELERIMQDLNVPLLTDLRIAIRNLK 132
            +D +SL+   ++ G  ++ +C+LV+QC  ++ R+A+RT  +LG L SA  +   N  L  SL+EL+  L     +VERCK+P    AK++   R+   K+ L+  E +LER+ +DL +PLLTD++  +  +K
Sbjct:    3 VDIISLVSLIYQAGGAVIHQCKLVKQCPGQAARLAMRTQNVLGLLSSAAEQFEGNVALETSLLELRNVLLRVIQLVERCKQPARFSAKVLRVFRIKATKEALVGAEADLERVTRDLRLPLLTDIKCQLGEIK 134
[Close]
BLAST of mRNA_H-paniculata_contig42684.10914.1 vs. uniprot
Match: A0A6H5J9C4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C4_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 4.160e-20
Identity = 48/132 (36.36%), Postives = 81/132 (61.36%), Query Frame = 0 
Query:    1 MDGLSLIGYAFKIGSDLVSRCELVEQCHIKSGRIALRTLRILGSLESARGEVSSNADLAASLIELKQALENANDIVERCKKPKGIRAKIVAGMRVPTLKKGLIKLETELERIMQDLNVPLLTDLRIAIRNLK 132
            +D +SL+   ++ G  ++ +C+LV+QC  ++ R+A+RT  +LG L SA  +   N  L  SL+EL+  L     +VERCK+P    AK++   R+   K+ L+  E +LER+ +DL +PLLTD++  +  +K
Sbjct:    3 VDIISLVSLIYQAGGAVIYQCKLVKQCPGQAARLAIRTQNVLGLLSSAAEQFEGNVALETSLLELRNVLLRVIQLVERCKQPARFSAKVLRVFRIKATKEALVGAEADLERVTRDLRLPLLTDIKRQLGEIK 134
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42684.10914.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LL51_ECTSI1.420e-3645.91APEX nuclease (Apurinic/apyrimidinic endonuclease)... [more]
D7FQW6_ECTSI1.140e-2036.36Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5J9C4_9PHAE4.160e-2036.36Protein kinase domain-containing protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 55..75
IPR036537Adaptor protein Cbl, N-terminal domain superfamilyGENE3D1.20.930.20coord: 1..121
e-value: 6.3E-6
score: 27.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig42684contigH-paniculata_contig42684:997..1506 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig42684.10914.1mRNA_H-paniculata_contig42684.10914.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig42684 997..1506 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig42684.10914.1 ID=prot_H-paniculata_contig42684.10914.1|Name=mRNA_H-paniculata_contig42684.10914.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=170bp
MDGLSLIGYAFKIGSDLVSRCELVEQCHIKSGRIALRTLRILGSLESARG
EVSSNADLAASLIELKQALENANDIVERCKKPKGIRAKIVAGMRVPTLKK
GLIKLETELERIMQDLNVPLLTDLRIAIRNLKKQGERDESDSQSAVAQSM
RDAILPRPGCSKRERGSNS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036537Adaptor_Cbl_N_dom_sf