prot_H-paniculata_contig4264.10905.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4264.10905.1
Unique Nameprot_H-paniculata_contig4264.10905.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length77
Homology
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BLAST of mRNA_H-paniculata_contig4264.10905.1 vs. uniprot
Match: D8LLI4_ECTSI (SEN1_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI4_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 1.290e-21
Identity = 49/77 (63.64%), Postives = 56/77 (72.73%), Query Frame = 0 
Query:    1 MSYPELLQDGEIEESFLTALRQVTSCGNECFSGSGWERHRSGVLTLLVHRNANVRQWAQSMARRSGIISAKVYREVL 77
            +SY +LL+DG IE +FL AL QVTS G   FSG  W +H  GVLTLLVHR A+ R WAQSMARR+G I AK Y EVL
Sbjct:  272 LSYSQLLEDGGIEGAFLAALSQVTSSGEGVFSGEEWNQHWPGVLTLLVHREASTRAWAQSMARRAGGIRAKEYVEVL 348
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4264.10905.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LLI4_ECTSI1.290e-2163.64SEN1_N domain-containing protein n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4264contigH-paniculata_contig4264:13332..14070 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4264.10905.1mRNA_H-paniculata_contig4264.10905.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4264 13332..14070 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4264.10905.1 ID=prot_H-paniculata_contig4264.10905.1|Name=mRNA_H-paniculata_contig4264.10905.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp
MSYPELLQDGEIEESFLTALRQVTSCGNECFSGSGWERHRSGVLTLLVHR
NANVRQWAQSMARRSGIISAKVYREVL
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