mRNA_H-paniculata_contig4263.10898.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4263.10898.1 vs. uniprot
Match: D7FXE9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXE9_ECTSI) HSP 1 Score: 378 bits (970), Expect = 2.770e-122 Identity = 197/295 (66.78%), Postives = 234/295 (79.32%), Query Frame = 3
Query: 66 MRVLVLLSPAKTLNWTSPPASLSALWSEPVFLPEADPVIEVMRSKSKADLKKLMSVSDSIADLNHKRFQQYLSADEAQHKIEQHPTGEDLFRPAALAYDGPAFRGLDATSFSEEDWAFSARSVRLLSGLYGVLKPTDLIQPYRLEMGSRVSVAERKDLYAYWKGKVTEGLLEDIGRRAKKGSNSTGSAGD-FLLVNVASQEYFKAVDLPAMQKAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVISRAKDVSDLANFTSEGYRLDRAQSDEHVLVFARSKGQR--PTSPPQAA 941
MRV+VLLSPAKTLNW + PASL+ LWS+P L ADPV+EVMR K KADLKKLMS+SD+IADLN +RF+++L + E + D+ RPAAL +DGPA+RG+DA +FSEEDWAF ARSVRLLSGLYGVL+PTDLIQPYRLEMGSRV+VA KDLY YWKG + + +LEDI +G S S D FL+VNVASQEY KAVD ++ AGGKVVTCVFKDDGRVLSVFAKRARGLLARHVV++RAKD++DL +F++EGYRLDR+Q + +LVF RSK QR PT P AA
Sbjct: 1 MRVVVLLSPAKTLNWATSPASLAELWSQPKLLQAADPVVEVMRKKKKADLKKLMSISDNIADLNVERFKKFLGSSEVEKMSTAVDLVADVARPAALVFDGPAYRGMDAATFSEEDWAFGARSVRLLSGLYGVLRPTDLIQPYRLEMGSRVAVAGMKDLYEYWKGDIAQCILEDI-----QGEGSVKSGTDEFLVVNVASQEYSKAVDFDQLESAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVVNRAKDIADLESFSAEGYRLDRSQCGDGLLVFTRSKAQRAAPTKPTMAA 290
BLAST of mRNA_H-paniculata_contig4263.10898.1 vs. uniprot
Match: A0A835YNT5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNT5_9STRA) HSP 1 Score: 229 bits (583), Expect = 1.520e-65 Identity = 133/293 (45.39%), Postives = 184/293 (62.80%), Query Frame = 3
Query: 72 VLVLLSPAKTLNWTSPPASLSALWSEPVFLPEADPVIEVMRSKSKADLKKLMSVSDSIADLNHKRFQQYLSADEAQHKIEQHPTGEDLFRPAALAYDGPAFRGLDATSFSEEDWAFSARSVRLLSGLYGVLKPTDLIQPYRLEMGSRVSV-AERKDLYAYWKGKVTEGLLEDIGRRAKKGSNSTGSAGDF-----LLVNVASQEYFKAVDLPAMQKAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVISRAKDVSDLANFTSEGYRLDRAQSDEHVLVFARSKGQRPTSPP 932
V+VLLSPAKTL+W P L ++ P LP +D + ++M+ KS ADLK L+SVS ++A LNH+R+Q + +D K GE RPAA AYDGPAF GL+A + S+ D + +LSGLYGV+ P DLIQPYRLEMG++V + E+ L +W+G +TE + + + + + SAGD ++VN ASQEY +AVD+ A++ G +V+ C F DDGR +SV AKR RGL+ARH++ SRA V D+ F+ EGY A+S LVF RSK R ++ P
Sbjct: 2 VVVLLSPAKTLSWEPAPPGLP--YAMPHLLPRSDTIAKLMKGKSVADLKSLLSVSPALATLNHERYQNFALSDSVADK-----KGE--LRPAAFAYDGPAFLGLEAETLSQSDLEHGQSVLCILSGLYGVVHPLDLIQPYRLEMGTKVELEGEKCALSDFWRGDITEHICQLLNEQQR-------SAGDKPPPPQIVVNAASQEYARAVDVKALRDTGVQVIDCTFHDDGRTVSVLAKRTRGLMARHIIQSRAASVDDIKAFSLEGYAFAEARSTPENLVFERSKEARLSAVP 278
BLAST of mRNA_H-paniculata_contig4263.10898.1 vs. uniprot
Match: A0A7S3XVD7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVD7_HETAK) HSP 1 Score: 221 bits (563), Expect = 4.560e-62 Identity = 126/289 (43.60%), Postives = 179/289 (61.94%), Query Frame = 3
Query: 72 VLVLLSPAKTLNWTSPPASLSALWSEPVFLPEADPVIEVMRSKSKADLKKLMSVSDSIADLNHKRFQQYLSADEAQHKIEQHPTGEDLFRPAALAYDGPAFRGLDATSFSEEDWAFSARSVRLLSGLYGVLKPTDLIQPYRLEMGSRVSVAERKDLYAYWKGKVTEGLLEDIGRRAKKGSNSTGSAGDFLLVNVASQEYFKAVDLPAMQKAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVISRAKDVSDLANFTSEGYRLDRAQSDEHVLVFARSKGQRPTSPPQA 938
+L++LSPAK+L W A ++ + P FL E+D V ++SK+K DLKK+M +SDS+A LN +R Q YL + EA+ K G+ A A+DGPA++GLDA S + E+ + ++++L GLYGVL+P DL+Q YRLEMG++++ + KDLY+YW +T L + I + + ++VN+ASQEY K+V+L +++ G VV C+FKD GRVLSVFAKRARGL+AR R V+ L F EGYR QS LVFAR K + P+A
Sbjct: 9 MLMILSPAKSLRWEKVTARVTP--TLPPFLTESDLVARALKSKTKNDLKKIMGISDSLAALNFERNQSYLLSKEAKKKS----YGDPELNMAVFAFDGPAYKGLDAESLNAEEMQYLQENLKILCGLYGVLRPCDLMQQYRLEMGTKMNCGQSKDLYSYWTETITPYLSDQI----------CNNQDEKVIVNLASQEYAKSVNLKRLEEEGVTVVNCIFKDRGRVLSVFAKRARGLMARWCAQQRPASVAALQGFDLEGYRFAAGQSTPTDLVFARDKPAPSSKTPRA 281
BLAST of mRNA_H-paniculata_contig4263.10898.1 vs. uniprot
Match: A0A1V9YRA9_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YRA9_9STRA) HSP 1 Score: 216 bits (549), Expect = 4.330e-61 Identity = 129/282 (45.74%), Postives = 179/282 (63.48%), Query Frame = 3
Query: 69 RVLVL-LSPAKTLNWTSPPASLSALWSEPVFLPEADPVIEVMRSKSKADLKKLMSVSDSIADLNHKRFQQYLSADEAQHKIEQHPTGEDLFRPAALAYDGPAFRGLDATSFSEEDWAFSARSVRLLSGLYGVLKPTDLIQPYRLEMGSRVSVAERKDLYAYWKGKVTEGLLEDIGRRAKKGSNSTGSA-GDFLLVNVASQEYFKAVDLPAMQKAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVISRAKDVSDLANFTSEGYRLDRAQSDEHVLVFARSK 908
R+LV+ LSPAKTL+ + A S+P FL EA +++ +R S+ LK L+ VSD+IA LN+ RF+ ++ EA PT D F+ A LA+DGPA++G+ A SFS+E+ A+S +R+L GLYG+L+P DLIQPYRLEMG +++ KDLYA+W + L N+ +A G+ +L+NVASQEYFK+VDL A+ + VV C+FKDDG++ SV+AKRARGL+ R V R V++L +F EGY +S E LVF RSK
Sbjct: 15 RMLVMVLSPAKTLDMA---LAKVATCSQPKFLDEASILVKELRKLSQTKLKDLLGVSDAIAKLNYDRFKSFVDHAEA-----SAPT--DTFKQALLAFDGPAYKGIQADSFSDEELAYSQNHLRILCGLYGILRPLDLIQPYRLEMGQKLANNRGKDLYAFWSSTLAHEL------------NALFAAEGEKILLNVASQEYFKSVDLTALDPSI-TVVECIFKDDGKIKSVYAKRARGLMVRFVTTRRVNSVAELKSFDLEGYTFSAKESSETSLVFNRSK 273
BLAST of mRNA_H-paniculata_contig4263.10898.1 vs. uniprot
Match: A0A484E4P8_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E4P8_BRELC) HSP 1 Score: 207 bits (527), Expect = 2.050e-57 Identity = 114/279 (40.86%), Postives = 173/279 (62.01%), Query Frame = 3
Query: 69 RVLVLLSPAKTLNWTSPPASLSALWSEPVFLPEADPVIEVMRSKSKADLKKLMSVSDSIADLNHKRFQQYLSADEAQHKIEQHPTGEDLFRPAALAYDGPAFRGLDATSFSEEDWAFSARSVRLLSGLYGVLKPTDLIQPYRLEMGSRVSVAERKDLYAYWKGKVTEGLLEDIGRRAKKGSNSTGSAGDFLLVNVASQEYFKAVDLPAMQKAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVISRAKDVSDLANFTSEGYRLDRAQSDEHVLVFARS 905
R++ +LSPAKTL+ +SP S S+P L A +I+ ++ S++ +K VSDS+A LN RFQ + +++ I T + A LA++GPA++GL+A++ SE D F+ +R+L GLYG+L+P DLIQPYRLEMG +++ KDLY +W + ++ ++ +K G G +L+NVASQEYFK++ A+Q A VV C+FKDDG++ SV+AKRARGL+ R+++ +R + DL F +EGY + S + LVF RS
Sbjct: 5 RLVFVLSPAKTLDLSSPRFSQC---SQPRLLSHAHELIDRLQKLSQSQIKSFFGVSDSLAKLNCDRFQHFDTSESVTKPIIASAT----LKQAVLAFNGPAYQGLEASTLSESDLEFAQTHLRILCGLYGILRPLDLIQPYRLEMGQKLATKRGKDLYEFW----GDTIVSELDALFRKQEAIDGKTGTRVLINVASQEYFKSLPSVALQTANISVVECIFKDDGKIKSVYAKRARGLMCRYLIQNRVDSIEDLKGFHTEGYSYSSSGSSQKKLVFIRS 272
BLAST of mRNA_H-paniculata_contig4263.10898.1 vs. uniprot
Match: A0A485LJ17_9STRA (Aste57867_21532 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJ17_9STRA) HSP 1 Score: 205 bits (522), Expect = 3.170e-57 Identity = 120/279 (43.01%), Postives = 179/279 (64.16%), Query Frame = 3
Query: 72 VLVLLSPAKTLNWTSPPASLSALWSEPVFLPEADPVIEVMRSKSKADLKKLMSVSDSIADLNHKRFQQYLSADEAQHKIEQHPTGEDLFRPAALAYDGPAFRGLDATSFSEEDWAFSARSVRLLSGLYGVLKPTDLIQPYRLEMGSRVSVAERKDLYAYWKGKVTEGLLEDIGRRAKKGSNSTGSAGDFLLVNVASQEYFKAVDLPAMQKAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVISRAKDVSDLANFTSEGYRLDRAQSDEHVLVFARSK 908
++++LSPAKTL+ + S ++P L EA +++ +R S+A LK L+ VSD+IA LN+ R++ ++ + +E+ PT + F+ A LA+DGPA++GL + ++S +D +F+ +R+L GLYG L P DLIQ YRLEMG +V+ KDLY +W G+ + +DI A S+ST + +L+NVAS EYFK++D A+ + VV CVFKDDG++ SV+AKRARGL+ HVV +RA ++D+ F+SEGY S LVF RSK
Sbjct: 2 IVMVLSPAKTLDMS---LSTHTTCTQPTHLNEASILVDELRKLSQAKLKALLGVSDAIAKLNYDRYKNFVKEGD----VEKEPT--ETFKQAVLAFDGPAYKGLQSETWSADDLSFAQDHLRILCGLYGTLHPLDLIQAYRLEMGQKVANPRGKDLYEFW-GRT---IADDI--NATFASSSTRTKAANILLNVASIEYFKSLDQSALDE-DITVVDCVFKDDGQIKSVYAKRARGLMVNHVVTTRATTLADIQAFSSEGYVFSTKDSSATTLVFHRSK 264
BLAST of mRNA_H-paniculata_contig4263.10898.1 vs. uniprot
Match: T0QNE9_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QNE9_SAPDV) HSP 1 Score: 204 bits (519), Expect = 6.540e-57 Identity = 122/294 (41.50%), Postives = 174/294 (59.18%), Query Frame = 3
Query: 72 VLVLLSPAKTLNWTSPPASLSALWSEPVFLPEADPVIEVMRSKSKADLKKLMSVSDSIADLNHKRFQQYLSADEAQHKIEQHPTGEDLFRPAALAYDGPAFRGLDATSFSEEDWAFSARSVRLLSGLYGVLKPTDLIQPYRLEMGSRVSVAERKDLYAYWKGKVTEGLLEDIGRRAKKGSNSTGSAGDFLLVNVASQEYFKAVDLPAMQKAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVISRAKDVSDLANFTSEGYRLDRAQSDEHVLVFARSKG-----QRPTSPPQA 938
++++LSPAKTL+ P ++P FL EA +++ +R + A LK L+ VSD++A LNH R++ ++ +A + D F+ A A+DGPA++G+ A SFS +D A+ +R+L GLYG+L+P DLIQPYRLEMG + + A KDLY +W G L D+ A +G +L+NVASQEYFK+VD A+ + +V VFKDDG++ S FAKRARGL+ +V R ++ L F EGY +S E LVFARSK Q T+PP+A
Sbjct: 2 LVMVLSPAKTLDLALPKLRTC---TQPKFLDEASILVQDLRKLTPAKLKGLLGVSDALAKLNHDRYKHFVDHADAS-------SPSDTFKQALFAFDGPAYKGIQAASFSTDDVAYVQDHLRILCGLYGILRPLDLIQPYRLEMGQKFANARGKDLYMFW-GNTIARELNDLFATAPEGDTK-------ILLNVASQEYFKSVDKSALDPSI-LIVDVVFKDDGKIKSAFAKRARGLMVHYVSTRRLSSIAALRAFDLEGYAFSNTESTETSLVFARSKAALKRHQDATAPPKA 276
BLAST of mRNA_H-paniculata_contig4263.10898.1 vs. uniprot
Match: A0A024G939_9STRA (Uncharacterized protein n=6 Tax=Albugo candida TaxID=65357 RepID=A0A024G939_9STRA) HSP 1 Score: 204 bits (518), Expect = 9.100e-57 Identity = 121/292 (41.44%), Postives = 178/292 (60.96%), Query Frame = 3
Query: 66 MRVLVLLSPAKTLNWTSPPASLSALWSEPVFLPEADPVIEVMRSKSKADLKKLMSVSDSIADLNHKRFQQYLSADEAQHKIEQHPTGEDLFRPAALAYDGPAFRGLDATSFSEEDWAFSARSVRLLSGLYGVLKPTDLIQPYRLEMGSRVSVAER--KDLYAYWKGKVTEGL--LEDIGRRAKKGSNSTGSAGDF-LLVNVASQEYFKAVDLPAMQKAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVISRAKDVSDLANFTSEGYRLDRAQSDEHVLVFARSKGQRPTS 926
MR+ +LSPAKTL T + + +EP+F+ ++ V+RS S A LK L + S SIA LNH+R Q+++ + IE+ ++ A LA+DGPAFRGLDA + + + + +R+LSGLYG+L+P D IQ YRLEMG ++ + R KDLY++W + E + L D G A +F +LVN+AS+EYF+AVD A+ + ++V CVFKDDGRV +V+AKRARGL+AR+++ R + + + F EGYR + +S E + VF RSK P +
Sbjct: 1 MRLAFVLSPAKTLKMTRTNRRVES--TEPIFMHHTAEIVRVLRSLSIAKLKSLYNASVSIATLNHQRLQEFIIDTKENADIER-------YKEAVLAFDGPAFRGLDAETLDDIEMEYCQTHLRILSGLYGLLRPLDKIQAYRLEMGQKLEIPTRRAKDLYSFWGSLLAESINALYD------------GEASEFKILVNLASKEYFRAVDTNALDE-DIRIVECVFKDDGRVRTVYAKRARGLMARYLIQKRVETMEGVQGFDLEGYRFNAKESTESICVFHRSKCDMPVN 270
BLAST of mRNA_H-paniculata_contig4263.10898.1 vs. uniprot
Match: A9V6G6_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V6G6_MONBE) HSP 1 Score: 202 bits (515), Expect = 8.080e-56 Identity = 126/304 (41.45%), Postives = 173/304 (56.91%), Query Frame = 3
Query: 72 VLVLLSPAKTLNWTSPPASLSALWSEPVFLPEADPVIEVMRSKSKADLKKLMSVSDSIADLNHKRFQQYLSADEAQHKIEQHPTGEDLFRPAALAYDGPAFRGLDATSFSEEDWAFSARSVRLLSGLYGVLKPTDLIQPYRLEMGSRVSVAERKDLYAYWKGK-VTEGLLEDIGRRAKKGSNSTGSAGDFLLVNVASQEYFKAVDLPAMQKAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVISRAKDVSDLANFTSEGYRLDRAQSDEHVLVFAR--------------SKGQRPTSPPQA 938
+L +LSPAK L++ S + + S+P FL + +I V++ KS DLKKLM +SD++A LN +R+Q + S A FR LA+DGPAFRGL+ + + + +LSGLYG L+P DLIQPYRLEMG+++ V +DLYA+W K ++ L E + + K +LVNVASQEYFK VD +Q+ G +VV VF++ GRV+SVFAKRARGL RH+ +AK + DL F +E Y+ D S + LVF R SK +PTS P A
Sbjct: 1 MLAVLSPAKALDFDSEVEAPTT--SQPHFLEASQSLIHVLKRKSAGDLKKLMGLSDNLAQLNRQRYQSWRSHTMATQ------AAAGAFRECGLAFDGPAFRGLNFAALDKASQLHLQEHLVILSGLYGGLRPCDLIQPYRLEMGTKLPVDATRDLYAFWAAKGLSAWLAERVAKTPSK-----------ILVNVASQEYFKVVDTSVLQEKGCQVVEVVFQEAGRVVSVFAKRARGLFVRHMAQRQAKTLGDLRAFNAENYKYDAKASTDSRLVFNRTSRPTAAAASSTAASKRTKPTSAPSA 285
BLAST of mRNA_H-paniculata_contig4263.10898.1 vs. uniprot
Match: A0A024TJM1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TJM1_9STRA) HSP 1 Score: 203 bits (516), Expect = 8.620e-56 Identity = 116/279 (41.58%), Postives = 176/279 (63.08%), Query Frame = 3
Query: 72 VLVLLSPAKTLNWTSPPASLSALWSEPVFLPEADPVIEVMRSKSKADLKKLMSVSDSIADLNHKRFQQYLSADEAQHKIEQHPTGEDLFRPAALAYDGPAFRGLDATSFSEEDWAFSARSVRLLSGLYGVLKPTDLIQPYRLEMGSRVSVAERKDLYAYWKGKVTEGLLEDIGRRAKKGSNSTGSAGDFLLVNVASQEYFKAVDLPAMQKAGGKVVTCVFKDDGRVLSVFAKRARGLLARHVVISRAKDVSDLANFTSEGYRLDRAQSDEHVLVFARSK 908
++++LSPAKTL+ + A+ + ++P+ L +A +I +R S + +K L+ VSD++A LN+ R++Q++ A K E F+ A LA+DGPA++GL ++++S D F+ +R+L GLYG L+P DLIQPYRLEMG +V A DLY++W + +DI K+ S++ +L+NVAS EYFK+V+L A+ + VV CVFKDDG++ SVFAKRARGL+ RHVV +RA ++ + F +EGY +S L+F RSK
Sbjct: 24 IVMVLSPAKTLDMSELEANSPS--TQPLHLDDASELIHDLRKLSLSKVKALLGVSDALAKLNYDRYKQFIMDGSATSKPES-------FKQAILAFDGPAYKGLQSSTWSASDMEFAQAHLRILCGLYGTLRPLDLIQPYRLEMGQKVVTARGSDLYSFW----GPAIAKDINEAFKESSSAN------ILLNVASIEYFKSVELTALDPSV-TVVDCVFKDDGQIKSVFAKRARGLMVRHVVTTRASTLAQVQAFHAEGYTFSAKESTGTQLIFNRSK 282 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4263.10898.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4263.10898.1 >prot_H-paniculata_contig4263.10898.1 ID=prot_H-paniculata_contig4263.10898.1|Name=mRNA_H-paniculata_contig4263.10898.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=360bp MRVLVLLSPAKTLNWTSPPASLSALWSEPVFLPEADPVIEVMRSKSKADLback to top mRNA from alignment at H-paniculata_contig4263:3748..15346- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4263.10898.1 ID=mRNA_H-paniculata_contig4263.10898.1|Name=mRNA_H-paniculata_contig4263.10898.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11599bp|location=Sequence derived from alignment at H-paniculata_contig4263:3748..15346- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4263:3748..15346- >mRNA_H-paniculata_contig4263.10898.1 ID=mRNA_H-paniculata_contig4263.10898.1|Name=mRNA_H-paniculata_contig4263.10898.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2160bp|location=Sequence derived from alignment at H-paniculata_contig4263:3748..15346- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |