prot_H-paniculata_contig42628.10897.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig42628.10897.1
Unique Nameprot_H-paniculata_contig42628.10897.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length75
Homology
[Close]
BLAST of mRNA_H-paniculata_contig42628.10897.1 vs. uniprot
Match: A0A6H5LBI9_9PHAE (PLCXc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LBI9_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 8.310e-22
Identity = 47/76 (61.84%), Postives = 56/76 (73.68%), Query Frame = 0 
Query:    3 HNPIVGPWASTQKLEIDQQLKAGVRVLDLRCGYVGPDVKE---VKDGVAIVHDIHRTSNSLRDVCMTVKDFVKNHP 75
            HNP+V PWA TQ L +  QLKAGVRVLDLRCGYVG + ++   V+DG+A+VHD HRTS SLR     VK FV+ HP
Sbjct:  268 HNPVVSPWAKTQNLGVLAQLKAGVRVLDLRCGYVGREAQKNDRVQDGIAVVHDKHRTSLSLRKALECVKGFVQAHP 343
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42628.10897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LBI9_9PHAE8.310e-2261.84PLCXc domain-containing protein n=2 Tax=Ectocarpus... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017946PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamilyGENE3D3.20.20.190coord: 1..75
e-value: 1.8E-15
score: 59.1
IPR017946PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamilySUPERFAMILY51695PLC-like phosphodiesterasescoord: 4..75
IPR000909Phosphatidylinositol-specific phospholipase C, X domainPFAMPF00388PI-PLC-Xcoord: 12..72
e-value: 3.5E-5
score: 23.4
NoneNo IPR availablePANTHERPTHR13593:SF35FI02810Pcoord: 4..75
NoneNo IPR availablePANTHERPTHR13593UNCHARACTERIZEDcoord: 4..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig42628contigH-paniculata_contig42628:1152..1376 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig42628.10897.1mRNA_H-paniculata_contig42628.10897.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig42628 1152..1376 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig42628.10897.1 ID=prot_H-paniculata_contig42628.10897.1|Name=mRNA_H-paniculata_contig42628.10897.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=75bp
QQHNPIVGPWASTQKLEIDQQLKAGVRVLDLRCGYVGPDVKEVKDGVAIV
HDIHRTSNSLRDVCMTVKDFVKNHP
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017946PLC-like_Pdiesterase_TIM-brl
IPR000909PLipase_C_PInositol-sp_X_dom