mRNA_H-paniculata_contig4262.10896.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4262.10896.1 vs. uniprot
Match: D7FW06_ECTSI (PHM7_cyt domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW06_ECTSI) HSP 1 Score: 351 bits (900), Expect = 6.920e-110 Identity = 178/307 (57.98%), Postives = 219/307 (71.34%), Query Frame = 1
Query: 1 SKMNKHFLGKKVNMAERYASMLKTMFVALFFSAIFPQGYYVAAMSMFMTYWSSKYCLFNRWRRPPPSDDSLTVMTRRYLAIALVIHILVSLQFYAGWPFDNLCPTDYVSGGNCGGVAIXXXXXXXXXXXXXXXXDFVNDTVYEYCQMDSDAVWGEMPEPWMSVDQMVIVWLFSMFANVMTFLVALMLFGKTLYHTLRRLCKGQHAPVGRENSVV-YSKVNQIEAYVPEVRDTKRPHSLIATDLHRVNTQHISWTGDFEAYNLCSVDSLPGLTRKQRAAMFSRVAFYPPPSNGDRGLPTPTRMRGIPL 918
+KMN +F+G V +AERYAS+LKTMFV LF+SAIFPQGY+VA+M+MFMTYWSSKYCLF RW+R PP +DSL V TRRYLAIALVIH++VSLQFYAGWPFD LCPTD V N A V D VYE C DS VWGE P+ WM DQ++IV++F++F V T VA++LFGKT+ +LRRLCKG + PVGR V +++V QI AYVP V K H ++A D+ V+ HISWTGD++AYNLC+ ++ PG++RK RA F RV FYPP + +GLPTPTRMRGIPL
Sbjct: 705 AKMNSYFMGSHVVLAERYASLLKTMFVCLFYSAIFPQGYFVASMAMFMTYWSSKYCLFYRWKRSPPMNDSLAVSTRRYLAIALVIHVMVSLQFYAGWPFDGLCPTDEVVQVNFWDEANVNFTIDGMFNVSTVLPS-VGDMVYETCDQDSSLVWGEGPQEWMPDDQLIIVFIFNLFGYVCTAAVAIILFGKTVLASLRRLCKGVYKPVGRHAKPVGFTEVQQINAYVPGVPYKKSVHPILACDIGNVDEHHISWTGDYQAYNLCTPEAFPGISRKIRANQFGRVVFYPPNAEEAKGLPTPTRMRGIPL 1010
BLAST of mRNA_H-paniculata_contig4262.10896.1 vs. uniprot
Match: A0A835YVZ1_9STRA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ1_9STRA) HSP 1 Score: 229 bits (583), Expect = 3.260e-65 Identity = 126/291 (43.30%), Postives = 175/291 (60.14%), Query Frame = 1
Query: 4 KMNKHFLGKKVNMAERYASMLKTMFVALFFSAIFPQGYYVAAMSMFMTYWSSKYCLFNRWRRPPPSDDSLTVMTRRYLAIALVIHILVSLQFYAGWPFDN-LCPTDYVSGGNCGGVAIXXXXXXXXXXXXXXXXDFVNDTVYEYCQMD-SDAVWGEMPEPWMSVDQMVIVWLFSMFANVMTFLVALMLFGKTLYHTLRRLCKGQHAPVGRENSVVYSKVNQIEAYVPEVRDTKRPHSLIATDLHRVNTQHISWT---GDFEAYNLCSVDSLPGLTRKQRAAMFSRVAFYPP 861
KMN +F+G +AERYASMLKT FVALFFSA+FP GY++AA+++F+TYW +KYCL W PPP L ++R YLA+A+++ +LV+L FYA WPFDN LC T G + TVY YC D S + W EPWM+ DQ +V L+S+ A V T LVA+ FG + + RL G + PVGR V YS+V +I+A+VP+V+ PH L+ATD+ R++T HI++ D++ +NLCS +P + ++R+ FSR YPP
Sbjct: 564 KMNSYFIGSPWFLAERYASMLKTAFVALFFSALFPAGYFIAALALFVTYWVNKYCLLRLWATPPPMGAFLAQLSRSYLALAVLVKLLVTLNFYANWPFDNELCKT---------GETVTQVSPEVAALGIAPGA-----TVYGYCATDVSGSPWYIFTEPWMNDDQKTLVHLYSITAIVATVLVAIFCFGGPFCYFVYRLYWGAYKPVGRAKGVPYSRVEEIQAFVPQVKFKLLPHPLLATDISRLDTHHIAFQVQDDDYQKFNLCSEADMPTIPEEERSNFFSRCINYPP 840
BLAST of mRNA_H-paniculata_contig4262.10896.1 vs. uniprot
Match: A0A835ZBF6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF6_9STRA) HSP 1 Score: 183 bits (465), Expect = 4.120e-49 Identity = 107/284 (37.68%), Postives = 150/284 (52.82%), Query Frame = 1
Query: 4 KMNKHFLGKKVNMAERYASMLKTMFVALFFSAIFPQGYYVAAMSMFMTYWSSKYCLFNRWRRPPPSDDSLTVMTRRYLAIALVIHILVSLQFYAGWPFDNLCPTDYVSGGNCGGVAIXXXXXXXXXXXXXXXXDFVNDTVYEYCQMDSDAVWGEMPEPWMSVDQMVIVWLFSMFANVMTFLVALMLFGKTLYHTLRRLCKGQHAPVGRENSVVYSKVNQIEAYVPEVRDTKRPHSLIATDLHRVNTQHISWTGDFEAYNLCSVDSLPGLTRKQRAAMFSRVAFY 855
KMN +FLG +AERY++MLKT+FVAL+FSAIFP GY++AA++MF+ YW +KYCL WR PPP D +T A WP + L + G+ V +V ++ ++ W WM+ DQ ++V L+S+ A VMT ++A FGK ++ L G + PVG + YS V QI+AYVP+V PH L+ATDL ++N HISW+GDF+ YNLCS LP + R+ R +FS +
Sbjct: 428 KMNSYFLGSGWFLAERYSNMLKTVFVALYFSAIFPAGYFIAALAMFINYWVNKYCLLRIWRTPPPMSDFITK---------------------ASWPHNGL----QLGTGSVTSVTPDVASLGISAGSPLYTDFYVMESHHD--------PWKVRTGWWMTDDQKILVTLYSITAIVMTVIIAAAYFGKEAAFSIYHLFHGAYKPVGDTQGISYSDVAQIQAYVPQVSIPTIPHPLLATDLSKLNRDHISWSGDFDHYNLCSSSDLPDIKREDRVKLFSPCVHF 678
BLAST of mRNA_H-paniculata_contig4262.10896.1 vs. uniprot
Match: A0A835ZJ83_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ83_9STRA) HSP 1 Score: 131 bits (329), Expect = 2.400e-30 Identity = 100/298 (33.56%), Postives = 145/298 (48.66%), Query Frame = 1
Query: 7 MNKHFLGKKVNMAERYASMLKTMFVALFFSAIFPQGYYVAAMSMFMTYWSSKYCLFNRWRRPPPSDDSLTVMTRRYLAIALVIHILVSLQFYAGWPFDNLCPTDYVSGGNCGGVAIXXXXXXXXXXXXXXXXDFVNDTVYEYCQMDSDAVWGEMPEPWMSVDQMVIVWLFSMFANVMTFL--VALMLFGKTLYHTLR-RLC--KGQHAPVGRENS--VVYSKVNQIEAYVPEVRDTKRPHSLIATDLHR--VNTQH---ISWTGDFEAYNLC--SVDSLPGLTRKQRAAMFSRVAFYP 858
MN++FLG + N+AERY MLKTMF+ +F+SA+ P G V +S+ ++YW KYCLF WRRPP D SL +R Y+ +++ H++++ F+A WPF + S CG + +C + W S DQ ++V ++S F + FL L LF Y+TLR LC K +H GR N+ V + V I+ YVP+V+ L DL + VN Q + G + A L + D+ PGL RA +FS V +YP
Sbjct: 836 MNRYFLGAEWNLAERYTDMLKTMFLGIFYSAVLPTGLIVVVISLTISYWVDKYCLFRLWRRPPALDGSLAAHSRLYMFLSIWAHVMITRVFWANWPF-TINEAGKSSEATCGFI---------------------------FCHAEQIG--------WTS-DQALMVTIYSWF-GLCLFLSGTLLSLFFYLRYYTLRIGLCGMKIRHDHSGRGNARMVSFRDVPGIDCYVPQVKSMWLVEPLFGLDLAQLPVNAQRFLPVRRGGTYSAQELSMDTADNFPGLAAPARAHLFSTVKYYP 1095
BLAST of mRNA_H-paniculata_contig4262.10896.1 vs. uniprot
Match: A0A7S2LRB2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LRB2_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.180e-23 Identity = 81/301 (26.91%), Postives = 139/301 (46.18%), Query Frame = 1
Query: 10 NKHFLGKKVNMAERYASMLKTMFVALFFSAIFPQGYYVAAMSMFMTYWSSKYCLFNRWRRPPPSDDSLTVMTRR-YLAIALVIHILVSLQFYAGWPFDNLCPTDYVSGGN-CGGVAIXXXXXXXXXXXXXXXXDFVNDTVYEYCQMD--------SDAVWGEMPEPWMSVDQMVIVWLF--SMFANVMTFLVALMLFGKTLYHTLRRLCKGQHAPVGRENSVVYSKVNQIEAYVPEVRD-TKRPHSLIATDLHRVNTQHISWT---GDFEAYNLCSV--DSLPGLTRKQRAAMFSRVAFYP 858
N F G +AERY ++ K +F+ F++ +FP GY+V + ++F+TY+ K+CL W + M R + + ++ +V+ YA +P+DNLC T+ +G G I + NDT Y+YC D + + WM+ DQ +V +F S F V+ L + +G + L +G + P G++ + +S ++ I AYVP++R K LIAT+ ++ + + W G +E ++L + L +K+R S V YP
Sbjct: 643 NACFRGAPWELAERYTTVTKLLFLCFFYAVLFPLGYFVCSAALFLTYYVDKFCLMRVWEPAAHIGTKVAEMNRALFFPLCILALFIVNSYHYARFPYDNLCATNQTAGLEYAGSYTIYTEGNVNDEYYAEYVTIYANDTAYKYCDQDILSALKFPATSKTQSDDATWMTDDQETLVDIFGWSGFGGVLAILT--LKYGVMTWSYLCSCFRGTYEPSGKDMKINFSSLDGISAYVPQIRYYAKENFPLIATNYEDIDLKFMDWEDPDGGYEKWDLRHEIPEDLMKRLKKKRRKYLSIVKHYP 941
BLAST of mRNA_H-paniculata_contig4262.10896.1 vs. uniprot
Match: A0A7S2V6J7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6J7_9STRA) HSP 1 Score: 111 bits (277), Expect = 1.470e-23 Identity = 69/237 (29.11%), Postives = 115/237 (48.52%), Query Frame = 1
Query: 1 SKMNKHFLGKKVNMAERYASMLKTMFVALFFSAIFPQGYYVAAMSMFMTYWSSKYCLFNRWRRPPPSDDSLTVMTRRYLAIALVIHILVSLQFYAGWPFDNLCPTDYVSGGNCGGVAIXXXXXXXXXXXXXXXXDFVNDTVYEYCQMDSD----------AVWGEMPEPWMSVDQMVIVWLFSMFA-NVMTFLVALMLFGKTLYHTLRRLCKGQHAPVGRENSVVYSKVNQIEAYVP 678
+K+ K+F G N+ ERY M KT+FVA+F++A+FP G +VAA+ TYW+ KY L W++PP D L + R ++ +L++H+L++ +Y GWPFDN Y+S +D VY+Y +S A + + W + +Q +V ++ + + ++ FL+ L+ K + T+ G + VG + Y+ V I YVP
Sbjct: 519 AKLEKNFQGTPWNLGERYTGMSKTLFVAMFYAALFPPGLWVAALCFAYTYWADKYLLLRVWQKPPQYDAQLAIQARGHIMFSLLVHLLITAHWYYGWPFDNT----YLS----------------------------SDGVYKYQDKNSYNLVKSGKFWFAFYVDPKSTWQNAEQQFLVKIYGIASLALLGFLLVFYLY-KDIVDTVNWAWYGDYDAVGESQGIPYNAVESITTYVP 722
BLAST of mRNA_H-paniculata_contig4262.10896.1 vs. uniprot
Match: A0A1Z5JCD7_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JCD7_FISSO) HSP 1 Score: 111 bits (277), Expect = 1.610e-23 Identity = 82/306 (26.80%), Postives = 152/306 (49.67%), Query Frame = 1
Query: 7 MNKHFLGKKVNMAERYASMLKTMFVALFFSAIFPQGYYVAAMSMFMTYWSSKYCLFNRWRRPPPSDDSLTVMTRRYL-AIALVIHILVSLQFYAGWPFDNLCPTDYVSGGNCGGVAIXXXXXXXXXXXXXXXXDFVNDTVYEYCQMD---------SDAVWGEM-PEP--WMSVDQMVIVWLFSMFA-NVMTFLVALMLFG--KTLYHTLRRLCKGQHAPVGRENSVVYSKVNQIEAYVPEVRDTKRPHSLIATDLHRVNTQHISWTG----DFEAYNLCS-VDSLPGLTRKQRAAMFSRVAFYPP 861
MN + G+ +AERY +M K +F+AL++SAI+P ++ + S+ + Y++ ++ L WRRPP +++ +RRY ++ALV L+S +++ +PFDNLC ++ G D D +Y+YC D S +M PE WM+ +Q +I +F + V+ + ++G K + H + G + PVG ++ +S+V I +Y+P+V + + L+A ++ ++ + + WT D++ Y+L ++L T +FS V ++PP
Sbjct: 716 MNINMQGQVFELAERYTNMTKILFLALWYSAIYPAALFLCSFSLLVNYFTDRFSLMRTWRRPPHLGTNISQFSRRYFFSLALVAMALLSSYYWSAFPFDNLCIDATIANNQYAGQWSFIQGDGTSNGTQIVQLD---DPLYKYCLQDFFRYPKEELSFPFISQMQPEDSTWMTEEQELIADIFGWTSVGVLGLIFFSFVWGWLKAIVHYFQ----GAYIPVGESQNIPFSEVPSISSYIPQVESSVFSYPLLACNVDGIDHKLLEWTDPDRPDYKFYDLTKDAEALLRGTVISSKVVFSHVGYFPP 1014
BLAST of mRNA_H-paniculata_contig4262.10896.1 vs. uniprot
Match: A0A7S1GL05_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GL05_CYCTE) HSP 1 Score: 108 bits (269), Expect = 1.630e-22 Identity = 82/304 (26.97%), Postives = 134/304 (44.08%), Query Frame = 1
Query: 4 KMNKHFLGKKVNMAERYASMLKTMFVALFFSAIFPQGYYVAAMSMFMTYWSSKYCLFNRWRRPPPSDDSLTVMTRRYLAIA-LVIHILVSLQFYAGWPFDNLCPTDYVSGGNCGGVAIXXXXXXXXXXXXXXXXDFVNDTVYEYCQMDSDAVWGEMPEP-----------WMSVDQMVIVWLFSMFANVMTFLVALMLFGKTLYHTLRRLCKGQHAPVGRENSVVYSKVNQIEAYVPEVRDTKRPHSLIATDLHRVNTQHISWTGDFEAY---NLCSVDSLPGLTRKQRAA-MFSRVAFYPPPS 867
+MN +F G M+ERY M K +F+ LF++ I+P G++ AA+++ + YWS K+ L W R P + +R Y A LV + ++ YAG+PFDN+C +G GG + NDT + +C D P WMS DQ L + + +V L+ F +R L + G+E + +++V I+AYVP+V + ++A+++ ++ I W + +D LP L R +FS V +Y PP+
Sbjct: 460 RMNVNFQGTFYEMSERYTDMTKIIFLTLFYADIWPIGFFFAAVTLVIHYWSDKFRLLRSWARAPEIGSEIAEFSRVYFFSACLVAYAVMQSYRYAGYPFDNVCD----AGTPVGGTYVGNYTASTWHGVNITVTIDSNDTNHFFCSQDMMRYRNPRVYPPTSNKQPAGFEWMSSDQADAAGLLGWGSVGVLAVVVLVYFKGFFMSVVRILFIDSYQSSGKEGNEDFTQVRDIQAYVPQVSHPSLQYPVVASEIDDFPSRFIGWHDPAYPHPHPRHSLIDDLPDLDEHNRGVPIFSTVKYYEPPA 759
BLAST of mRNA_H-paniculata_contig4262.10896.1 vs. uniprot
Match: A0A7S1ZSV8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZSV8_TRICV) HSP 1 Score: 107 bits (267), Expect = 2.830e-22 Identity = 82/312 (26.28%), Postives = 137/312 (43.91%), Query Frame = 1
Query: 1 SKMNKHFLGKKVNMAERYASMLKTMFVALFFSAIFPQGYYVAAMSMFMTYWSSKYCLFNRWRRPPPSDDSLTVMTRRYLAIALVIHILVSLQFYAGWPFDNLC------PTDYVS------GGNCGGVAIXXXXXXXXXXXXXXXXDFVNDTVYEYCQMDS--------DAVWGEMPE--PWMSVDQMVIVWLFSMFANVMTFLVALMLFGKTLYHTLRRLCKGQHAPVGRENSVVYSKVN-QIEAYVPEVRDTKRPHSLIATDLHRVNTQHISWTGDFEAYNLCSV-DSLPGLTRKQRAAMFSRVAFYPPP 864
S+MN F G ++ERY + +FV ++ IFP G++ A+ ++F+ YW+ K+C+ W R P +T+ + ++ + ++ +VS + A +PFDN C P++YV G A+ D Y +C D AV PE WM Q I ++ + + V +++F + L TL L + P G+ +S + +I YVP+VR RP L+ D + + I W + Y +V LPGL+ K+ +FS+V + PP
Sbjct: 380 SRMNLLFQGGYYELSERYTNTTTVLFVTFYYGLIFPTGFFFASATLFIHYWTDKFCILRTWDRAPRLGTQVTMNAKAFIMLTIIAFAVVSSFYVASFPFDNACEDESAVPSEYVGTWTIRVGDGSTATAVVEE----------------GDDTYHFCNQDMLRFKPPAFPAVPSNQPEGGEWMEPGQEKIASIYGWTSLFVLIGVLVIIFVRFLSLTLGHLFYPGYRPSGKVGQENFSDPDLEIRGYVPQVRLYGRPFPLLLCDTSDIEDKLIGWEDWYRGYRTHNVLYDLPGLSEKEN--LFSKVKQWLPP 673
BLAST of mRNA_H-paniculata_contig4262.10896.1 vs. uniprot
Match: A0A7S0KCH8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KCH8_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.860e-20 Identity = 79/280 (28.21%), Postives = 133/280 (47.50%), Query Frame = 1
Query: 7 MNKHFLGKKVNMAERYASMLKTMFVALFFSAIFPQGYYVAAMSMFMTYWSSKYCLFNRWRRPPPSDDSLTVMTRRYL-AIALVIHILVSLQFYAGWPFDNLC------PTDYVSGGNCGGVAIXXXXXXXXXXXXXXXXDFVNDTVYEYCQMDSDAVWGEMP-------EPWMSVDQMVIVWLFSMFANVMTFLVALMLFGKTLYHTLRR-LCKGQHAPVGRENSVVYSKVNQIEAYVPEVRDTKRPHSLIATDLHRVNTQHISWTGDFEAYNLCSVDSL 801
+N + G +AERY ++ K +F+A F++A++P G++V ++++ +TY++ K+ F WR P + ++ R ++ + L+ ILV+ YA +P+D LC P +Y G N + D N T Y YC + + P + WM+ Q +V F F + ++ FG + Y + + G + PVG + + +SKV I AYVP+VR + L+A D+ V+ I +T D E N SV SL
Sbjct: 1 INSYMRGTIYEVAERYTTVTKLLFLAFFYAAMYPMGFFVCSLALCITYFADKFATFRIWRPAPMLGNEVSEFQRDWVFPVVLLALILVTGYLYAMFPYDFLCESEDPVPEEYY-GEN---YTVIKKESDDGGSQVQVTVD-ENSTAYRYCDQNIFVNFYFPPRSQAQDGDNWMTGQQEFVVNFVGWFGFTCFFTIVVLKFGVSSYKAYKSWIYGGGYEPVGDDQGIPFSKVESITAYVPQVRSVAFVYPLLACDVIHVDGSLIGFT-DPEHENDHSVHSL 274 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4262.10896.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4262.10896.1 >prot_H-paniculata_contig4262.10896.1 ID=prot_H-paniculata_contig4262.10896.1|Name=mRNA_H-paniculata_contig4262.10896.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=304bp MNKHFLGKKVNMAERYASMLKTMFVALFFSAIFPQGYYVAAMSMFMTYWSback to top mRNA from alignment at H-paniculata_contig4262:9477..15719- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4262.10896.1 ID=mRNA_H-paniculata_contig4262.10896.1|Name=mRNA_H-paniculata_contig4262.10896.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6243bp|location=Sequence derived from alignment at H-paniculata_contig4262:9477..15719- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4262:9477..15719- >mRNA_H-paniculata_contig4262.10896.1 ID=mRNA_H-paniculata_contig4262.10896.1|Name=mRNA_H-paniculata_contig4262.10896.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1824bp|location=Sequence derived from alignment at H-paniculata_contig4262:9477..15719- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |