prot_H-paniculata_contig4261.10892.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4261.10892.1
Unique Nameprot_H-paniculata_contig4261.10892.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length203
Homology
BLAST of mRNA_H-paniculata_contig4261.10892.1 vs. uniprot
Match: A0A6H5KF19_9PHAE (Mitochondrial import inner membrane translocase subunit TIM22 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KF19_9PHAE)

HSP 1 Score: 263 bits (673), Expect = 4.450e-87
Identity = 134/167 (80.24%), Postives = 146/167 (87.43%), Query Frame = 0
Query:   38 PQSG--LPWFKVWMPKPAPGAAEAERPPGNAMDSCGFKLIMGTVGGAGMGFVFGIFLGMMGDMQPLQMVNGREVPQAPLREQVRLQYKQTAERSLGMARNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGIKQGPQAACAGCLGMAAFSAIMDKIMGH 202
            PQ G  LP+F  W+P+PA GAA+A   P    +SCGFKLIMGTVGGAGMGFVFG+FLG MGDMQPLQM+NGREVPQAP REQ RL YKQTA+RSL M RNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFG+KQGPQAAC GC+GMA FSA+MDK+MGH
Sbjct:   26 PQLGSRLPFFLPWVPRPAAGAADAMPTPPVLTESCGFKLIMGTVGGAGMGFVFGLFLGAMGDMQPLQMINGREVPQAPFREQARLAYKQTADRSLSMGRNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSALMDKLMGH 192          
BLAST of mRNA_H-paniculata_contig4261.10892.1 vs. uniprot
Match: A0A836C710_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C710_9STRA)

HSP 1 Score: 202 bits (514), Expect = 8.100e-63
Identity = 107/161 (66.46%), Postives = 121/161 (75.16%), Query Frame = 0
Query:   42 LPWFKVWMPKPAPGAAEAERPPGNAMDSCGFKLIMGTVGGAGMGFVFGIFLGMMGDMQPLQMVNGREVPQAPLREQVRLQYKQTAERSLGMARNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGIKQGPQAACAGCLGMAAFSAIMDKIMGH 202
            LP  K W  +   G     +PP    +SCG +LIMGT GG GMG +FG+FLG MGDMQP+Q++NGREVPQAPL EQ R  Y  T  RSLGMA+NFASFSAIFM SECVIEKMRGK DMMNSVY GC TG AFGIK GP+ A  GCLGMAAFSA++D +MGH
Sbjct:   42 LPTVKAWDMRT--GGTMPPQPPALG-ESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQPIQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH 199          
BLAST of mRNA_H-paniculata_contig4261.10892.1 vs. uniprot
Match: W7TL11_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TL11_9STRA)

HSP 1 Score: 153 bits (386), Expect = 2.390e-43
Identity = 85/176 (48.30%), Postives = 110/176 (62.50%), Query Frame = 0
Query:   27 RSNIAFLGPWSPQSGLPWFKVWMPKPAPGAAEAERPPGNAMDSCGFKLIMGTVGGAGMGFVFGIFLGMMGDMQP-LQMVNGREVPQAPLREQVRLQYKQTAERSLGMARNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGIKQGPQAACAGCLGMAAFSAIMDKIMG 201
            + ++ F  P  P   LP++K       P    A  PP N  ++C  + + G V GAG+G + GIFLG MGDM P + ++NGRE PQAP  EQ+RL Y+ T ER    ARNF + +A+F G +CV+EK RGK D  N+V +GC  GAA   KQGPQAAC GC G AAFS IM+ +MG
Sbjct:   33 KPDLLFTSP--PPFPLPFYKYVSLPQTPAGMVAVAPP-NPQENCVGRSVFGAVAGAGLGVMMGIFLGAMGDMSPAIPIINGREAPQAPAGEQLRLAYRATFERCGHWARNFMALTALFSGVDCVVEKFRGKHDAYNAVISGCGVGAALSAKQGPQAACLGCAGFAAFSGIMEVVMG 205          
BLAST of mRNA_H-paniculata_contig4261.10892.1 vs. uniprot
Match: A0A7S2P255_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P255_9STRA)

HSP 1 Score: 151 bits (382), Expect = 1.400e-42
Identity = 83/171 (48.54%), Postives = 108/171 (63.16%), Query Frame = 0
Query:   33 LGPWSPQSGLPWFKVWMPKPAPGAAEAERPPGNAMDSCGFKLIMGTVGGAGMGFVFGIFLGMMGDMQP-LQMVNGREVPQAPLREQVRLQYKQTAERSLGMARNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGIKQGPQAACAGCLGMAAFSAIMDKIMGH 202
            L P+   + LP+   WMP    GA E         +SCG K  +G  GGA MG + G+FLG M DM P + ++NG+EVPQAPL+EQ R   + T E+ +  +RNFA  + +F GSEC++EK RGK D+ N V +GC TGAA   KQGPQAA  GC G AAFS ++D +MGH
Sbjct:   51 LNPYFNTTRLPYLIPWMPT-FNGAQEPPPDFSFMTESCGIKSAIGLFGGAAMGLLMGVFLGAMSDMTPPVTVINGKEVPQAPLKEQARTVMRATGEKCVYWSRNFAFITGVFAGSECLVEKARGKHDVWNQVLSGCVTGAAIQAKQGPQAAALGCGGFAAFSLVIDAVMGH 220          
BLAST of mRNA_H-paniculata_contig4261.10892.1 vs. uniprot
Match: A0A7S2AAN4_TRICV (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2AAN4_TRICV)

HSP 1 Score: 145 bits (366), Expect = 1.060e-39
Identity = 79/165 (47.88%), Postives = 104/165 (63.03%), Query Frame = 0
Query:   42 LPWFKVWMPKPAPGAAEAERPPGN---AMDSCGFKLIMGTVGGAGMGFVFGIFLGMMGDMQP-LQMVNGREVPQAPLREQVRLQYKQTAERSLGMARNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGIKQGPQAACAGCLGMAAFSAIMDKIMGH 202
            LP+   W P P P A+ AE PP +     +SCG K  +G  GGA  G   G+FLG M DM P + ++NG+EVPQAPL+EQ+R   + T E+ +  +RNFA  + +F G+EC++EK RGK D+ NS   GC TGAA   KQGPQAA  GC G A FS ++D +  H
Sbjct:   97 LPYLTPWYPIPGPNAS-AEGPPPDFSWLSESCGGKAAIGVFGGAVCGLFMGVFLGAMSDMTPPVTVINGKEVPQAPLKEQMRTTVRATGEKCIYWSRNFAFITGVFGGTECLVEKYRGKHDVWNSALGGCVTGAALQAKQGPQAAAIGCGGFAVFSLVIDSVFPH 260          
BLAST of mRNA_H-paniculata_contig4261.10892.1 vs. uniprot
Match: K0TBX0_THAOC (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TBX0_THAOC)

HSP 1 Score: 144 bits (363), Expect = 2.050e-39
Identity = 80/164 (48.78%), Postives = 106/164 (64.63%), Query Frame = 0
Query:   41 GLPWFKVWMPKPAPGAAEAERPPGN--AMDSCGFKLIMGTVGGAGMGFVFGIFLGMMGDMQP-LQMVNGREVPQAPLREQVRLQYKQTAERSLGMARNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGIKQGPQAACAGCLGMAAFSAIMDKIMG 201
            GLP+ + W       A+ AE PP      +SCG K  +G +GG  MG V G+FLG + DM P + ++ G+EVPQAPL+EQ+R   + TA++SL   R FA  + +F GSEC++EK RGK D+ NSV +GC TGAA   KQGPQA+ AGC G A FS ++D  MG
Sbjct:   83 GLPYPQPWA---RANASPAELPPNFDWLSESCGSKAAIGVIGGGAMGLVMGVFLGALTDMTPPVTIIEGKEVPQAPLKEQMRTTLRATADKSLYWCRQFAFITGVFGGSECLVEKYRGKHDVWNSVVSGCITGAAMQAKQGPQASAAGCGGFAVFSLVIDSFMG 243          
BLAST of mRNA_H-paniculata_contig4261.10892.1 vs. uniprot
Match: A0A7S1TYW7_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYW7_9STRA)

HSP 1 Score: 142 bits (358), Expect = 2.490e-39
Identity = 73/141 (51.77%), Postives = 93/141 (65.96%), Query Frame = 0
Query:   63 PGNAMDSCGFKLIMGTVGGAGMGFVFGIFLGMMGDMQP-LQMVNGREVPQAPLREQVRLQYKQTAERSLGMARNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGIKQGPQAACAGCLGMAAFSAIMDKIMGH 202
            PG A +SC  + ++G+  G  MG V G+FLG MGD+ P +  V G+E PQ PL EQ R  Y+ TAERS+G AR+F + +A+F G+ECVIEK RG+ D  N V +GCA GA      GP AAC GC G AAFSA  + +MGH
Sbjct:   51 PGWAAESCVGRAVLGSFAGGAMGLVLGVFLGAMGDLNPPIYFVKGKEAPQPPLAEQARTAYRTTAERSIGFARSFFALTALFSGTECVIEKFRGRHDGWNPVLSGCAAGAMMSASGGPTAACMGCAGFAAFSAAAEAVMGH 191          
BLAST of mRNA_H-paniculata_contig4261.10892.1 vs. uniprot
Match: A0A6U3RYY1_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RYY1_9STRA)

HSP 1 Score: 144 bits (362), Expect = 4.900e-39
Identity = 78/163 (47.85%), Postives = 104/163 (63.80%), Query Frame = 0
Query:   42 LPWFKVWMPKPAPGAAEAERPPGNAM--DSCGFKLIMGTVGGAGMGFVFGIFLGMMGDMQP-LQMVNGREVPQAPLREQVRLQYKQTAERSLGMARNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGIKQGPQAACAGCLGMAAFSAIMDKIMG 201
            LP+F+ W P   P     + PP      +SCG K  +G  GG  MG + G+FLG M DM P + ++ G+EVPQAPL+EQ+R   + TAE+S+   R FA  + +F GSEC++EK RGKTD+ NSV +GC TGAA   K GP +A  GC G AAFS ++D +MG
Sbjct:  105 LPYFQPWKPTSGP----EQLPPDFTFLSESCGGKAAIGVFGGGVMGLLMGVFLGAMSDMTPPVTVIGGKEVPQAPLKEQMRTTMRATAEKSMYWCRQFAFITGVFSGSECLVEKYRGKTDVWNSVLSGCVTGAAMQAKAGPSSAAFGCGGFAAFSLVIDSVMG 263          
BLAST of mRNA_H-paniculata_contig4261.10892.1 vs. uniprot
Match: A0A448Z601_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z601_9STRA)

HSP 1 Score: 144 bits (362), Expect = 5.710e-39
Identity = 80/167 (47.90%), Postives = 102/167 (61.08%), Query Frame = 0
Query:   39 QSGLPWFKVWMPKPAPGAAEAERPPGNA--MDSCGFKLIMGTVGGAGMGFVFGIFLGMMGDMQP-LQMVNGREVPQAPLREQVRLQYKQTAERSLGMARNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGIKQGPQAACAGCLGMAAFSAIMDKIMGH 202
            +  LP+F  W     P     E PP  A  MD C  K  +G  GG  MG + G+FLG + D QP +Q+  G++VPQAP +EQ R   + TAE+S+   RNFA  + +F GSEC++EK RGK DM N V +GC TGAA     GPQAA  GC G AAFS ++DKIMG+
Sbjct:  108 RKSLPYFMPWKTSGGP----TEIPPNYAWLMDGCAGKAAIGVFGGGVMGLLMGVFLGALSDSQPPIQVAGGKDVPQAPFKEQARYTMRATAEKSMYWCRNFAFITGVFGGSECLVEKFRGKHDMWNPVVSGCITGAALQAHAGPQAAAVGCGGFAAFSIVIDKIMGN 270          
BLAST of mRNA_H-paniculata_contig4261.10892.1 vs. uniprot
Match: A0A7S3VGZ9_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VGZ9_9STRA)

HSP 1 Score: 142 bits (359), Expect = 6.400e-39
Identity = 82/168 (48.81%), Postives = 109/168 (64.88%), Query Frame = 0
Query:   40 SGLPWFKVWMPKPAPGAAEAER---PP--GNAMDSCGFKLIMGTVGGAGMGFVFGIFLGMMGDMQP-LQMVNGREVPQAPLREQVRLQYKQTAERSLGMARNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGIKQGPQAACAGCLGMAAFSAIMDKIMG 201
            +G+P    +M  P P  A +     PP  G   +SC  K  +G +GG+  G V G+FLG M DM P + ++NG+EVPQAPLREQ+R   + T E+SL  ARNFA  + +F G++C++EK RG  D+ NSV +GC TGAA   KQGPQAA  GC G AAFS ++DK+MG
Sbjct:   68 TGIPPQAQYMAYPVPWRATSGPDYLPPDFGWLSESCAGKTAIGVLGGSVCGLVMGVFLGAMSDMTPPVTIINGKEVPQAPLREQMRTTLRATGEKSLYWARNFAFITGVFGGTDCLVEKYRGTHDVWNSVISGCVTGAAMQAKQGPQAAAIGCGGFAAFSLVIDKVMG 235          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4261.10892.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KF19_9PHAE4.450e-8780.24Mitochondrial import inner membrane translocase su... [more]
A0A836C710_9STRA8.100e-6366.46Mitochondrial import inner membrane translocase su... [more]
W7TL11_9STRA2.390e-4348.30Mitochondrial import inner membrane translocase su... [more]
A0A7S2P255_9STRA1.400e-4248.54Mitochondrial import inner membrane translocase su... [more]
A0A7S2AAN4_TRICV1.060e-3947.88Mitochondrial import inner membrane translocase su... [more]
K0TBX0_THAOC2.050e-3948.78Mitochondrial import inner membrane translocase su... [more]
A0A7S1TYW7_9STRA2.490e-3951.77Mitochondrial import inner membrane translocase su... [more]
A0A6U3RYY1_9STRA4.900e-3947.85Mitochondrial import inner membrane translocase su... [more]
A0A448Z601_9STRA5.710e-3947.90Mitochondrial import inner membrane translocase su... [more]
A0A7S3VGZ9_9STRA6.400e-3948.81Mitochondrial import inner membrane translocase su... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 71..193
e-value: 1.0E-28
score: 99.9
NoneNo IPR availablePANTHERPTHR14110:SF0MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22coord: 59..201
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..73
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 95..202
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..94
NoneNo IPR availableTMHMMTMhelixcoord: 74..96
IPR039175Mitochondrial import inner membrane translocase subunit TIM22PANTHERPTHR14110MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22coord: 59..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4261contigH-paniculata_contig4261:7726..9493 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4261.10892.1mRNA_H-paniculata_contig4261.10892.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4261 6975..9528 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4261.10892.1 ID=prot_H-paniculata_contig4261.10892.1|Name=mRNA_H-paniculata_contig4261.10892.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=203bp
MVDHNSGKSNEGFGDTRQQQQQQQHQRSNIAFLGPWSPQSGLPWFKVWMP
KPAPGAAEAERPPGNAMDSCGFKLIMGTVGGAGMGFVFGIFLGMMGDMQP
LQMVNGREVPQAPLREQVRLQYKQTAERSLGMARNFASFSAIFMGSECVI
EKMRGKTDMMNSVYAGCATGAAFGIKQGPQAACAGCLGMAAFSAIMDKIM
GH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039175TIM22