mRNA_H-paniculata_contig426.10889.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig426.10889.1 vs. uniprot
Match: D7G6M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6M4_ECTSI) HSP 1 Score: 242 bits (617), Expect = 1.540e-73 Identity = 125/180 (69.44%), Postives = 137/180 (76.11%), Query Frame = 1
Query: 1 QALPPDWNGGDIPPGFH--PNLPTIMTKQPTDGVDYNTYFFDPLVGGREGERRMEALRIFGSRNMASSGELLSGFFRYFASELDCRSHVVSIRLGGLADRERKAEASCWSMHTRLSLEDPFETWYDVAHVLKWSRYKHVRMEFARAYALIARTGSSGRVIGITGGGDVNLADLLEIICEQ 534
QALPPDW G + H P LP +MTKQPTDG+D +TYF+DPL GR+GERR LR FGSRN ASSGELL+GFFRYFA ELDCR+ VVS+RLGGLADRERKAEA CWSMHTRLSLEDPFET YDVAHVLKWSR+KHVRMEFARAYAL+A G D + LLE IC Q
Sbjct: 480 QALPPDWAGEPL----HGVPRLPVVMTKQPTDGLDCDTYFYDPLTPGRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELDCRTSVVSVRLGGLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALLA---------GXXXXXDAS--SLLETICSQ 644
BLAST of mRNA_H-paniculata_contig426.10889.1 vs. uniprot
Match: K8YXG6_NANGC (Nucleotidyltransferase-like protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YXG6_NANGC) HSP 1 Score: 140 bits (353), Expect = 1.530e-36 Identity = 75/185 (40.54%), Postives = 105/185 (56.76%), Query Frame = 1
Query: 1 QALPPDWNGGDIPPGFHPN----LPTIMTKQPTDGVDYNTYFFDPLVGGREGER--RMEALRIFGSRNMASSGELLSGFFRYFASELDCRSHVVSIRLGGLADRERKAEASCWSMHTRLSLEDPFETWYDVAHVLKWSRYKHVRMEFARAYALIARTGSSGRVIGITGGGDVNLADLLEIICEQA 537
Q LPPDW G ++ LP + P +G+D +TYF+ +G+ + LR + +RN AS GELL FF Y++ E D R V+S+RLGG +ERKAE W++++RL++EDPFETWY+V H LK +++H+R EFARAYAL G + LL ICE+A
Sbjct: 205 QLLPPDWKGNEMDRREQMQGQRQLPRQLVTHPLEGMDVDTYFYTEPPSEEQGQPNGQRNLLREYAARNKASVGELLVAFFWYYSWEFDYRDLVLSVRLGGAMKKERKAEEDGWAVNSRLAIEDPFETWYNVTHFLKEGKHRHIRQEFARAYALCVEEAMG------EGATEAGAEGLLARICEEA 383
BLAST of mRNA_H-paniculata_contig426.10889.1 vs. uniprot
Match: W7TXG0_9STRA (PAP/25A-associated n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXG0_9STRA) HSP 1 Score: 140 bits (353), Expect = 2.660e-35 Identity = 75/185 (40.54%), Postives = 105/185 (56.76%), Query Frame = 1
Query: 1 QALPPDWNGGDIPPGFHPN----LPTIMTKQPTDGVDYNTYFFDPLVGGREGER--RMEALRIFGSRNMASSGELLSGFFRYFASELDCRSHVVSIRLGGLADRERKAEASCWSMHTRLSLEDPFETWYDVAHVLKWSRYKHVRMEFARAYALIARTGSSGRVIGITGGGDVNLADLLEIICEQA 537
Q LPPDW G ++ LP + P +G+D +TYF+ +G+ + LR + +RN AS GELL FF Y++ E D R V+S+RLGG +ERKAE W++++RL++EDPFETWY+V H LK +++H+R EFARAYAL G + LL ICE+A
Sbjct: 672 QLLPPDWKGNEMDRREQMQGQRQLPRQLVTHPLEGMDVDTYFYTEPPSEEQGQPNGQRSLLREYAARNKASVGELLVAFFWYYSWEFDYRDLVLSVRLGGAMKKERKAEEDGWAVNSRLAIEDPFETWYNVTHFLKEGKHRHIRQEFARAYALCVEEAMG------EGATEAGAEGLLARICEEA 850
BLAST of mRNA_H-paniculata_contig426.10889.1 vs. uniprot
Match: A0A4D9DCB2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCB2_9STRA) HSP 1 Score: 139 bits (349), Expect = 9.680e-35 Identity = 73/185 (39.46%), Postives = 105/185 (56.76%), Query Frame = 1
Query: 1 QALPPDWNGGDIPPGFHP----NLPTIMTKQPTDGVDYNTYFFDPLVGGREGER--RMEALRIFGSRNMASSGELLSGFFRYFASELDCRSHVVSIRLGGLADRERKAEASCWSMHTRLSLEDPFETWYDVAHVLKWSRYKHVRMEFARAYALIARTGSSGRVIGITGGGDVNLADLLEIICEQA 537
Q LPPDW G ++ +LP + P +G+D +TYF+ +G+ + LR + +RN A GELL FF Y++ E D R V+S+R+GG +ERKAE W++++RL++EDPFETWY+V H LK +++H+R EFARAYAL G + LL ICE+A
Sbjct: 1101 QLLPPDWKGNEMDRREQMQGQRHLPRQLVTHPLEGMDVDTYFYTEAPSEEQGQPNGQRSLLREYAARNKACVGELLVAFFWYYSWEFDYRDLVLSVRMGGAMKKERKAEEDGWAVNSRLAIEDPFETWYNVTHFLKEGKHRHIRQEFARAYALCVEEAMG------EGATEAGAEGLLARICEEA 1279
BLAST of mRNA_H-paniculata_contig426.10889.1 vs. uniprot
Match: A0A6V1RBI5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RBI5_HETAK) HSP 1 Score: 130 bits (328), Expect = 1.590e-33 Identity = 84/185 (45.41%), Postives = 105/185 (56.76%), Query Frame = 1
Query: 1 QALPPDWN-GGDIPPGFHPNLPTIMTKQPTDGVDYNTYFFDPLVGGREGERRMEALRI-FGSRNMASSGELLSGFFRYFASELDCRSHVVSIRL---GGLADRERKAEASCWSMHTRLSLEDPFETWYDVAHVLKWSRYKHVRMEFARAYALIART-GSSGRVIGITGGGDVNLADLLEIICEQA 537
QALPP W GG P LPT+ T Q DG NTYF+ P G AL F RN + G+LL F+ + A LD R VVS+R GG +E KAEA CW +RLS+EDPFETWYDVAHVLK ++ ++VR EF RAY LI + G+ GR G L +LL+ IC+++
Sbjct: 169 QALPPGWEQGGPARP-----LPTVETPQLADGRPANTYFYTPPGGD------YSALSAAFARRNTETVGQLLLAFWHHVAHRLDTRKSVVSVRTSSPGGTLPKEYKAEADCWGQPSRLSIEDPFETWYDVAHVLKTTKDQYVRGEFHRAYTLIVQVHGNLGR-----GMPPEALENLLDEICKES 337
BLAST of mRNA_H-paniculata_contig426.10889.1 vs. uniprot
Match: A0A835YMU6_9STRA (WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMU6_9STRA) HSP 1 Score: 130 bits (327), Expect = 8.960e-32 Identity = 91/225 (40.44%), Postives = 108/225 (48.00%), Query Frame = 1
Query: 1 QALPPDWNGGDIPPGFHPN--LPTIMTKQPTDGVDYNTYFFDPLVGGREGERRMEALRIFG-SRNMASSGELLS--------------------------GFFRYFASELDCRSHVVSIRLGGLADRERKAEASCWSMHTRLSLEDPFETWYDVAHVLKWS-----------------RYKHVRMEFARAYALIARTGSSGRVIGITGGGDVNLADLLEIICEQA 537
QALPPDW G P LP T +DG NTYFF P G + RR AL +++ A G LS GFFRY+A ELD R+ VVS+R GG + KAEA W HTRLS+EDPFETWYDVAHVLKWS R+K + EFARAY L+ G GGGD + DLL+ +C+ A
Sbjct: 1597 QALPPDWPGPPAAAPTRPGRGLPERSTAHASDGRLCNTYFFVPPQGS-DCLRRFAALNTESYAQSYAQFGNELSLKEVFVEPSMXXXXXXXXXXXXXXLAGFFRYYAWELDMRTRVVSLRSGGTLPKAGKAEADAWGTHTRLSIEDPFETWYDVAHVLKWSSNLXXXXXXXXXXXXXXRHKLLHTEFARAYTLLCEAAQRTTNPG-GGGGDAS--DLLQTLCQAA 1817
BLAST of mRNA_H-paniculata_contig426.10889.1 vs. uniprot
Match: K3W949_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W949_GLOUD) HSP 1 Score: 128 bits (322), Expect = 4.000e-31 Identity = 75/178 (42.13%), Postives = 98/178 (55.06%), Query Frame = 1
Query: 1 QALPPDWNGG---DIPPGF---------------HPN--LPTIMTKQPTDGVDYN----------TYFFDPLVGGREGERRMEALRIFGSRNMASSGELLSGFFRYFASELDCRSHVVSIRLGGLADRERKAEASCWSMHTRLSLEDPFETWYDVAHVLKWSRYKHVRMEFARAYALI 444
QALPP W+G D P HP LP+++ K P + + TYFFDP ++ ++++ LR FG RN AS+GELL GFF YF + D VVS+R+ +E K S W MHTRLS+EDPFE YDVAHVLK SR K++R +FA AY+L+
Sbjct: 802 QALPPAWDGSRRCDCTPSRVWCSLQSPQCALSERHPEMQLPSVLCKGPAGDNEASSSNGNSGKVETYFFDPFAF-QDPPQKLQVLREFGKRNSASAGELLIGFFEYFGLQFDASRQVVSVRMARNLSKEEKKRESQWRMHTRLSIEDPFEIAYDVAHVLKGSRDKYIRQQFAWAYSLL 978
BLAST of mRNA_H-paniculata_contig426.10889.1 vs. uniprot
Match: G5A5T8_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A5T8_PHYSP) HSP 1 Score: 127 bits (319), Expect = 1.040e-30 Identity = 71/159 (44.65%), Postives = 91/159 (57.23%), Query Frame = 1
Query: 1 QALPPDWNGGDIPPGFHPNLPTIMTKQPTDGVDYN---------TYFFDPLVGGREGERRMEALRIFGSRNMASSGELLSGFFRYFASELDCRSHVVSIRL--GGLADRERKAEASCWSMHTRLSLEDPFETWYDVAHVLKWSRYKHVRMEFARAYALI 444
QALPP+W P LP+++ + P+D +D N TYFFDP RE ++ AL FG+RN S GELL GF RY+ + D VVS+R G ++ K S W TRLS+EDPFE YDVAHVLK SR K++R +F RAY L+
Sbjct: 1169 QALPPNW-----PDEPREKLPSVLCRGPSDELDPNATDGHSGIETYFFDPFAF-REPNEKLAALNDFGARNTQSVGELLLGFLRYYGLQFDATRDVVSVRRPDAGTVTKDEKRHTSQWRFTTRLSIEDPFEVGYDVAHVLKGSRDKYIRQQFVRAYVLL 1321
BLAST of mRNA_H-paniculata_contig426.10889.1 vs. uniprot
Match: A0A6A3SY79_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SY79_9STRA) HSP 1 Score: 125 bits (315), Expect = 3.500e-30 Identity = 70/159 (44.03%), Postives = 91/159 (57.23%), Query Frame = 1
Query: 1 QALPPDWNGGDIPPGFHPNLPTIMTKQPTDGVDYN---------TYFFDPLVGGREGERRMEALRIFGSRNMASSGELLSGFFRYFASELDCRSHVVSIRL--GGLADRERKAEASCWSMHTRLSLEDPFETWYDVAHVLKWSRYKHVRMEFARAYALI 444
QALPP+W P LP+++ + P+D +D N TYF+DP RE ++ AL FG+RN S GELL GF RY+ + D VVS+R G ++ K S W TRLS+EDPFE YDVAHVLK SR K++R +F RAY L+
Sbjct: 879 QALPPNW-----PDEPKEKLPSVLCRGPSDELDPNAADGHSGIETYFYDPFAF-REPNEKLAALNEFGARNTQSVGELLLGFLRYYGLQFDATRDVVSVRRPDAGTVTKDEKRHTSQWRFTTRLSIEDPFEVGYDVAHVLKGSRDKYIRQQFVRAYVLL 1031
BLAST of mRNA_H-paniculata_contig426.10889.1 vs. uniprot
Match: H3HDL1_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HDL1_PHYRM) HSP 1 Score: 123 bits (308), Expect = 3.110e-29 Identity = 67/149 (44.97%), Postives = 88/149 (59.06%), Query Frame = 1
Query: 1 QALPPDWNGGDIPPGFHPNLPTIMTKQPTDGVD--YNTYFFDPLVGGREGERRMEALRIFGSRNMASSGELLSGFFRYFASELDCRSHVVSIRLG--GLADRERKAEASCWSMHTRLSLEDPFETWYDVAHVLKWSRYKHVRMEFARAY 435
Q LPP+W P LP+I+ + P++ +D TYF+DP RE ++ +LR FG+RN S GELL GF RY+ + D VVS+R G ++ K S W TRLS+EDPFE YDVAHVLK SR K++R +F RAY
Sbjct: 1145 QTLPPNW-----PDEPREKLPSILCRGPSEELDPGIETYFYDPFAF-REPNEKLASLRDFGARNTQSVGELLLGFLRYYGLQFDATRDVVSVRRADAGTVTKDEKRHTSQWRFTTRLSIEDPFEVGYDVAHVLKGSRDKYIRQQFVRAY 1287 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig426.10889.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig426.10889.1 >prot_H-paniculata_contig426.10889.1 ID=prot_H-paniculata_contig426.10889.1|Name=mRNA_H-paniculata_contig426.10889.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=179bp QALPPDWNGGDIPPGFHPNLPTIMTKQPTDGVDYNTYFFDPLVGGREGERback to top mRNA from alignment at H-paniculata_contig426:35467..38019- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig426.10889.1 ID=mRNA_H-paniculata_contig426.10889.1|Name=mRNA_H-paniculata_contig426.10889.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2553bp|location=Sequence derived from alignment at H-paniculata_contig426:35467..38019- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig426:35467..38019- >mRNA_H-paniculata_contig426.10889.1 ID=mRNA_H-paniculata_contig426.10889.1|Name=mRNA_H-paniculata_contig426.10889.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1074bp|location=Sequence derived from alignment at H-paniculata_contig426:35467..38019- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |