prot_H-paniculata_contig4259.10883.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4259.10883.1
Unique Nameprot_H-paniculata_contig4259.10883.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length222
Homology
BLAST of mRNA_H-paniculata_contig4259.10883.1 vs. uniprot
Match: A0A6H5JQT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQT1_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 8.660e-56
Identity = 111/211 (52.61%), Postives = 140/211 (66.35%), Query Frame = 0
Query:   24 SRPTGDSLLRISQACETLLAGFYSGQATGLRSCLVSRDRAASFAERNSNSSSGRQAG-QGIQRDLNLSGDYLPPLEEAMVRRRTRPSFLLPAWRAVGFAVGTGSSALLPPNAVDKVGASISTIVAEQYDANIRSMYEAKIEQEEREVKDLFKAQRDDPARICLG-GENPEEG-----------TIPDARIMVIEGSLKSVLRVACDVTSKM 221
            SR TG+SLLR+SQACETLL+GF +G+A  + SC+VSR  A   +ER++  +     G +G  R +  S D+L PLE AM  RR RPS LLPAWRAVGFAVGTG++ALLP     KVGA+IS  V E YD NIR+MY+A+I  EE+EVK+LFKAQRD+ +R+ L  G  P  G               AR M + G+LKS LR AC VT+K+
Sbjct:    6 SRSTGNSLLRVSQACETLLSGFNNGKAAAVGSCVVSRKHAVKLSERDTTRAGDVDKGPEGEARHMGPS-DHLLPLESAMANRRARPSLLLPAWRAVGFAVGTGATALLPAETSAKVGAAISRAVLEHYDENIRAMYDARIVNEEQEVKELFKAQRDELSRVALSSGAGPGAGGTXXXXXXXXXXXXXARSMAVAGTLKSALRAACTVTAKI 215          
BLAST of mRNA_H-paniculata_contig4259.10883.1 vs. uniprot
Match: D7FX83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX83_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 7.120e-20
Identity = 46/70 (65.71%), Postives = 54/70 (77.14%), Query Frame = 0
Query:  101 MVRRRTRPSFLLPAWRAVGFAVGTGSSALLPPNAVDKVGASISTIVAEQYDANIRSMYEAKIEQEEREVK 170
            M  RR RPS LLPAWRAVGFAVGTG++ALLP +A  KVGA+IS  V E YD NIR+MY+A+I  EE E +
Sbjct:    1 MANRRARPSLLLPAWRAVGFAVGTGATALLPADASAKVGAAISRAVLEHYDENIRAMYDARIVAEEHEAR 70          
BLAST of mRNA_H-paniculata_contig4259.10883.1 vs. uniprot
Match: A0A0R3SZZ1_RODNA (Uncharacterized protein n=1 Tax=Rodentolepis nana TaxID=102285 RepID=A0A0R3SZZ1_RODNA)

HSP 1 Score: 57.4 bits (137), Expect = 1.060e-6
Identity = 41/130 (31.54%), Postives = 58/130 (44.62%), Query Frame = 0
Query:   29 DSLLRISQACETLLAGFYSGQATGLRSCLVSRDRAASFAERNSNSSSGRQAGQGIQRDLNLSGDYLPPLEEAMVRRRTRPSFLLPAWRAVGFAVGTGSSALLPPNAVDKVGASISTIVAEQYDANIRSMY 158
            D LLRI QA        Y GQ   L + L+  +   +  E  SN                     +   E+ M   RTRPS L+P W+A GFA G  ++ LL   A     +++ T+VAEQY+  IR ++
Sbjct:   14 DKLLRIDQAIGLAAKYVYKGQLAVLNNGLIVDNLLNNLTEEKSN---------------------IAKFEQLMPLNRTRPSALMPVWKAAGFAFGI-TTGLLGEEATKSFNSAVETVVAEQYNHQIRELF 121          
BLAST of mRNA_H-paniculata_contig4259.10883.1 vs. uniprot
Match: A0A0R3SRP7_HYMDI (Uncharacterized protein n=2 Tax=Hymenolepis diminuta TaxID=6216 RepID=A0A0R3SRP7_HYMDI)

HSP 1 Score: 53.9 bits (128), Expect = 1.920e-5
Identity = 47/150 (31.33%), Postives = 64/150 (42.67%), Query Frame = 0
Query:   29 DSLLRISQACETLLAGFYSGQATGLRSCLVSRDRAASFAERNSNSSSGRQAGQGIQRDLNLSGDYLPPLEEAMVRRRTRPSFLLPAWRAVGFAVGTGSSALLPPNAVDKVGASISTIVAEQYDANIRSMYEAKIEQEEREVKDLFKAQRD 178
            D LLRI  A        Y GQ   L +  V      S +E  SN                     +   E+ M   R RPS L+P W+  GFA G  ++ALL   A+    +++ T+VAEQY+  IR ++ A       E+ DL K  RD
Sbjct:   16 DKLLRIDHAKGLAAKYMYKGQLAVLNNGSVVDTLRNSLSEEKSN---------------------IAQFEQLMPLNRARPSALMPVWKVAGFAFGI-TTALLGEEAIKTFNSAVETVVAEQYNHQIRELF-ADNPAAHAELLDLLKQFRD 142          
BLAST of mRNA_H-paniculata_contig4259.10883.1 vs. uniprot
Match: A0A564YJH2_HYMDI (Uncharacterized protein n=2 Tax=Hymenolepis diminuta TaxID=6216 RepID=A0A564YJH2_HYMDI)

HSP 1 Score: 52.8 bits (125), Expect = 3.070e-5
Identity = 40/130 (30.77%), Postives = 56/130 (43.08%), Query Frame = 0
Query:   29 DSLLRISQACETLLAGFYSGQATGLRSCLVSRDRAASFAERNSNSSSGRQAGQGIQRDLNLSGDYLPPLEEAMVRRRTRPSFLLPAWRAVGFAVGTGSSALLPPNAVDKVGASISTIVAEQYDANIRSMY 158
            D LLRI  A        Y GQ   L +  V      S +E  SN                     +   E+ M   R RPS L+P W+  GFA G  ++ALL   A+    +++ T+VAEQY+  IR ++
Sbjct:   16 DKLLRIDHAKGLAAKYMYKGQLAVLNNGSVVDTLRNSLSEEKSN---------------------IAQFEQLMPLNRARPSALMPVWKVAGFAFGI-TTALLGEEAIKTFNSAVETVVAEQYNHQIRELF 123          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4259.10883.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JQT1_9PHAE8.660e-5652.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX83_ECTSI7.120e-2065.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0R3SZZ1_RODNA1.060e-631.54Uncharacterized protein n=1 Tax=Rodentolepis nana ... [more]
A0A0R3SRP7_HYMDI1.920e-531.33Uncharacterized protein n=2 Tax=Hymenolepis diminu... [more]
A0A564YJH2_HYMDI3.070e-530.77Uncharacterized protein n=2 Tax=Hymenolepis diminu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 155..175
NoneNo IPR availablePANTHERPTHR11237:SF45-DEMETHOXYUBIQUINONE HYDROXYLASE, MITOCHONDRIALcoord: 97..215
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..18
score: 5.0
IPR011566Ubiquinone biosynthesis protein Coq7PFAMPF03232COQ7coord: 97..216
e-value: 1.6E-10
score: 41.0
IPR011566Ubiquinone biosynthesis protein Coq7PANTHERPTHR11237COENZYME Q10 BIOSYNTHESIS PROTEIN 7coord: 97..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4259contigH-paniculata_contig4259:1264..5497 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4259.10883.1mRNA_H-paniculata_contig4259.10883.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4259 683..5535 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4259.10883.1 ID=prot_H-paniculata_contig4259.10883.1|Name=mRNA_H-paniculata_contig4259.10883.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=222bp
MAVVRSFSTAMSSGAASCSRSNGSRPTGDSLLRISQACETLLAGFYSGQA
TGLRSCLVSRDRAASFAERNSNSSSGRQAGQGIQRDLNLSGDYLPPLEEA
MVRRRTRPSFLLPAWRAVGFAVGTGSSALLPPNAVDKVGASISTIVAEQY
DANIRSMYEAKIEQEEREVKDLFKAQRDDPARICLGGENPEEGTIPDARI
MVIEGSLKSVLRVACDVTSKM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011566Ubq_synth_Coq7