mRNA_H-paniculata_contig42540.10874.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig42540.10874.1
Unique NamemRNA_H-paniculata_contig42540.10874.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig42540.10874.1 vs. uniprot
Match: A0A8F0F705_9PHAE (Cytochrome c biogenesis protein CcsB n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F705_9PHAE)

HSP 1 Score: 680 bits (1754), Expect = 1.000e-243
Identity = 350/440 (79.55%), Postives = 393/440 (89.32%), Query Frame = 1
Query:    4 IKAFLKKLANLKLAIIILLVIAIITSIGSIVEQGRDLAFYKNNYSVSLFGVTIWKIILAIGLNNIYSTWWFFCLLFTLGLSLSCCTILQQLPTLKFSRRYYFYKQISQFNKLPFKIKRIKAFQTHLSYALLTKQYSVFQQYNTIYAYKGLISRVGPIIVHLSIICILIGSTLGALTGFNSQELIPETEIFHTQNIIKTGLFSSIPQKTFRINDFWATYNINNQIKQFYSDISVLNGKGLEFKRKTISVNNPLLINDLIIYQTDWSILGIRLNLIKNDLNTTTIQLPILKLNNTSNQKIWVSSLPSLKENIILLIKNNRGQISLYDNEGKFVKNINLGEDLNLXXXXXXXXXXVDLDFKNINFIDIISSTGIQIKSDPGVKLIYIGFLFLIISSLISYISFSELWLLKCSNRFLCGGKTNRAKVKFQIEFLTFQQSFIMND 1323
            I+ F K LANLKLAI+ILL IAI+TSIGSI+EQ RD+ FY+N Y+ SLFG+  W+IIL +GLN+IYSTWWFF LLF  GLSLSCCTILQQLPTLKFSRRYYFYKQ SQF+KL  KIKRIK F+THLSYAL+ KQYS+FQQYNTIYAYKGLISR+GPI+VH SIICIL+GSTLGALTGFNSQELIPETEIFHTQNIIKTGLFSS+PQKTFRINDFWA YNINNQIKQFYSDISVLNGKG EF+RKTISVNNPLLIN+LIIYQTDW ILGIRLNLI+ND + T IQLPILKLNN S+QK+W+SSL S KEN+ILLIKNNRGQI+LY+ EGKF+KNINLGE+LN+          +DLD +NIN IDIISSTGIQIKSDPGVKL+YIGFLFLIISSLISYISFSELWLL+ +N+ + GGKTNRA+VKF++EFL FQQSFI N+
Sbjct:    6 IRRFFKNLANLKLAILILLAIAIVTSIGSIIEQSRDIQFYQNTYTYSLFGMESWRIILLLGLNSIYSTWWFFFLLFIFGLSLSCCTILQQLPTLKFSRRYYFYKQKSQFSKLSVKIKRIKVFRTHLSYALIRKQYSLFQQYNTIYAYKGLISRIGPIVVHFSIICILLGSTLGALTGFNSQELIPETEIFHTQNIIKTGLFSSVPQKTFRINDFWAIYNINNQIKQFYSDISVLNGKGSEFRRKTISVNNPLLINELIIYQTDWGILGIRLNLIRNDFSNTVIQLPILKLNNFSSQKLWMSSLTSRKENVILLIKNNRGQIALYEKEGKFIKNINLGENLNI----------IDLDLRNINLIDIISSTGIQIKSDPGVKLLYIGFLFLIISSLISYISFSELWLLEFTNQVMFGGKTNRAQVKFKVEFLRFQQSFIKNN 435          
BLAST of mRNA_H-paniculata_contig42540.10874.1 vs. uniprot
Match: A0A516ICN0_9PHAE (Cytochrome c biogenesis protein CcsB n=27 Tax=Laminariales TaxID=2886 RepID=A0A516ICN0_9PHAE)

HSP 1 Score: 578 bits (1491), Expect = 7.090e-204
Identity = 300/440 (68.18%), Postives = 358/440 (81.36%), Query Frame = 1
Query:    1 MIKAFLKKLANLKLAIIILLVIAIITSIGSIVEQGRDLAFYKNNYSVSLFGVTIWKIILAIGLNNIYSTWWFFCLLFTLGLSLSCCTILQQLPTLKFSRRYYFYKQISQFNKLPFKIKRIKAFQTHLSYALLTKQYSVFQQYNTIYAYKGLISRVGPIIVHLSIICILIGSTLGALTGFNSQELIPETEIFHTQNIIKTGLFSSIPQKTFRINDFWATYNINNQIKQFYSDISVLNGKGLEFKRKTISVNNPLLINDLIIYQTDWSILGIRLNLIKNDLNTTTIQLPILKLNNTSNQKIWVSSLPSLKEN---IILLIKNNRGQISLYDNEGKFVKNINLGEDLNLXXXXXXXXXXVDLDFKNINFIDIISSTGIQIKSDPGVKLIYIGFLFLIISSLISYISFSELWLLKCSNRFLCGGKTNRAKVKFQIEFLTFQQSF 1311
            MIK   K LANL+LAIIILL IAI+TSIGSI+EQ +++ FY+NNY   +F +  WKI+L  G +NIYSTWWF  LL  LGLSL+CCT+LQQLPTLKFSRRYYFYKQ++Q+NKL FKIK IK F +HLSY LL K+YS+FQQ N+ YAYKGLISRVGPIIVHLSIIC+L+GSTLGAL GFNSQELIP+TE+FH QN+IK G+FSSIPQKTFRINDFW+TY  N  IKQFY+D+SVLNG+G E +RKTISVNNPLL+NDLIIYQTDW ILG+RL  +KND +  ++QLPI K+N  S+QKIW+SSLP+ K++    I+LIK++RGQISLYDN+GKFVK IN+G+ +               D  + NF DIISSTGIQIKSDPG+KLIY GFLFL++SSLISYISFSE WLL    + + GGKTNRAKVKF +EFL F+QSF
Sbjct:    1 MIKRVFKYLANLQLAIIILLAIAIVTSIGSIIEQNKEILFYQNNYPTLIFSIPFWKILLFFGFDNIYSTWWFLLLLSLLGLSLACCTVLQQLPTLKFSRRYYFYKQVNQYNKLTFKIKSIKVFPSHLSYVLLKKEYSLFQQSNSFYAYKGLISRVGPIIVHLSIICVLLGSTLGALEGFNSQELIPKTEVFHIQNVIKNGVFSSIPQKTFRINDFWSTYTSNGSIKQFYTDVSVLNGRGGETQRKTISVNNPLLLNDLIIYQTDWGILGLRLKYVKNDNSIISLQLPISKIN-ISSQKIWISSLPNTKQDTKSFIVLIKDHRGQISLYDNDGKFVKTINIGDTIYRN------------DLISFNFADIISSTGIQIKSDPGIKLIYFGFLFLMVSSLISYISFSEFWLLYFPTKVIAGGKTNRAKVKFNLEFLKFKQSF 427          
BLAST of mRNA_H-paniculata_contig42540.10874.1 vs. uniprot
Match: A0A8F0FBU9_9PHAE (Cytochrome c biogenesis protein CcsB n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FBU9_9PHAE)

HSP 1 Score: 577 bits (1488), Expect = 2.260e-203
Identity = 297/440 (67.50%), Postives = 357/440 (81.14%), Query Frame = 1
Query:    1 MIKAFLKKLANLKLAIIILLVIAIITSIGSIVEQGRDLAFYKNNYSVSLFGVTIWKIILAIGLNNIYSTWWFFCLLFTLGLSLSCCTILQQLPTLKFSRRYYFYKQISQFNKLPFKIKRIKAFQTHLSYALLTKQYSVFQQYNTIYAYKGLISRVGPIIVHLSIICILIGSTLGALTGFNSQELIPETEIFHTQNIIKTGLFSSIPQKTFRINDFWATYNINNQIKQFYSDISVLNGKGLEFKRKTISVNNPLLINDLIIYQTDWSILGIRLNLIKNDLNTTTIQLPILKLNNTSNQKIWVSSLPSLKE---NIILLIKNNRGQISLYDNEGKFVKNINLGEDLNLXXXXXXXXXXVDLDFKNINFIDIISSTGIQIKSDPGVKLIYIGFLFLIISSLISYISFSELWLLKCSNRFLCGGKTNRAKVKFQIEFLTFQQSF 1311
            M+K F++ LANLKLAIIILLVIA+++SIGS++EQ +D+ FY++NYS+ LF +  WK+IL +GLNNIYSTWWF  LL  LGLSL+ CTILQQLPTLKFSRRYYFYKQ++Q+NKLPFK  RIK F +HLSYAL+TKQYS+FQQ N+ YAYKGLISR+GPIIVHLSIIC+L+G TLGAL GFNSQELIP+TE+FH QNIIKTG FSSIPQKTFRINDFW+ Y  N  IKQFY+DISVLNG G E KRKTISVNNPLL+++LIIYQTDW ILG+RL  IK D++   +QLPI K+NN SNQK W+SSLP +K+   N+I+LIK+NRGQI+LY+NEGKFV+NIN+G+++N+             D  +         TGIQIKSDPG+KLIY GF  L+ SSLISYISFSE WLL    + + GGKTNRAKVK+ +EFL FQQSF
Sbjct:    1 MVKRFIRFLANLKLAIIILLVIALVSSIGSVIEQSKDIQFYQSNYSILLFNIPFWKVILFLGLNNIYSTWWFLFLLGFLGLSLASCTILQQLPTLKFSRRYYFYKQVNQYNKLPFKTNRIKVFPSHLSYALITKQYSLFQQSNSFYAYKGLISRIGPIIVHLSIICVLLGGTLGALNGFNSQELIPKTEVFHIQNIIKTGFFSSIPQKTFRINDFWSLYTSNGDIKQFYTDISVLNGNGSEIKRKTISVNNPLLLSNLIIYQTDWGILGLRLKYIKKDISEINLQLPISKINN-SNQKFWISSLPGIKQSTKNMIVLIKDNRGQINLYNNEGKFVENINIGDNINIT------------DLISFTLTXXXXXTGIQIKSDPGIKLIYFGFFCLMFSSLISYISFSEFWLLYLPKKAISGGKTNRAKVKYNLEFLKFQQSF 427          
BLAST of mRNA_H-paniculata_contig42540.10874.1 vs. uniprot
Match: A0A8F0F7S4_9PHAE (Cytochrome c biogenesis protein CcsB n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7S4_9PHAE)

HSP 1 Score: 573 bits (1477), Expect = 9.530e-202
Identity = 295/440 (67.05%), Postives = 357/440 (81.14%), Query Frame = 1
Query:    1 MIKAFLKKLANLKLAIIILLVIAIITSIGSIVEQGRDLAFYKNNYSVSLFGVTIWKIILAIGLNNIYSTWWFFCLLFTLGLSLSCCTILQQLPTLKFSRRYYFYKQISQFNKLPFKIKRIKAFQTHLSYALLTKQYSVFQQYNTIYAYKGLISRVGPIIVHLSIICILIGSTLGALTGFNSQELIPETEIFHTQNIIKTGLFSSIPQKTFRINDFWATYNINNQIKQFYSDISVLNGKGLEFKRKTISVNNPLLINDLIIYQTDWSILGIRLNLIKNDLNTTTIQLPILKLNNTSNQKIWVSSLPSLKEN---IILLIKNNRGQISLYDNEGKFVKNINLGEDLNLXXXXXXXXXXVDLDFKNINFIDIISSTGIQIKSDPGVKLIYIGFLFLIISSLISYISFSELWLLKCSNRFLCGGKTNRAKVKFQIEFLTFQQSF 1311
            MIK F + LANLKLAI+ILL IAI+TSIGS++EQ R+++FY+ NY   +  +  WKI+L +G NNIYSTWWF  LL  LGLSL+CCT+LQQLPTLKFSRRYYFYKQ++Q+NKL FKIK IK F +HLSY LL KQYS+FQQ N+ YAYKGLISRVGPIIVHLSIIC+L+GS+LGAL GFNSQELIP+TE+FH QN+IK G FSSIPQKTFRINDFW+ Y  N  IKQFY+D+SVLNG G+E +RKTISVNNPLL+NDLIIYQTDW ILG+RL   KN  +  ++QLPI K+N TSNQKIW+SSLP+ +++    I+LIK+NRGQISLY+N+GKFVK+IN+G+++             + D  + N  DIISSTG+QIKSDPG+KLIY GFLFL+ SSLISYISFSE WLL    + + GGKTNRAKVK+ +EFL F+QSF
Sbjct:    1 MIKRFFRYLANLKLAIVILLAIAIVTSIGSVIEQSREVSFYQQNYPTLILTIPFWKILLFLGFNNIYSTWWFLLLLSLLGLSLACCTVLQQLPTLKFSRRYYFYKQVNQYNKLTFKIKAIKVFPSHLSYTLLQKQYSLFQQSNSFYAYKGLISRVGPIIVHLSIICVLLGSSLGALKGFNSQELIPKTEVFHIQNVIKNGFFSSIPQKTFRINDFWSIYTSNGSIKQFYTDVSVLNGHGIEVQRKTISVNNPLLLNDLIIYQTDWGILGLRLKYNKNGTSWVSVQLPISKIN-TSNQKIWISSLPNRQKDGKSFIVLIKDNRGQISLYNNDGKFVKSINIGDNI------------YNTDSISFNLADIISSTGVQIKSDPGIKLIYFGFLFLMFSSLISYISFSEFWLLYFPTKVISGGKTNRAKVKYNLEFLKFKQSF 427          
BLAST of mRNA_H-paniculata_contig42540.10874.1 vs. uniprot
Match: A0A344PF95_9PHAE (Cytochrome c biogenesis protein CcsB n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A344PF95_9PHAE)

HSP 1 Score: 568 bits (1465), Expect = 6.590e-200
Identity = 294/440 (66.82%), Postives = 357/440 (81.14%), Query Frame = 1
Query:    1 MIKAFLKKLANLKLAIIILLVIAIITSIGSIVEQGRDLAFYKNNYSVSLFGVTIWKIILAIGLNNIYSTWWFFCLLFTLGLSLSCCTILQQLPTLKFSRRYYFYKQISQFNKLPFKIKRIKAFQTHLSYALLTKQYSVFQQYNTIYAYKGLISRVGPIIVHLSIICILIGSTLGALTGFNSQELIPETEIFHTQNIIKTGLFSSIPQKTFRINDFWATYNINNQIKQFYSDISVLNGKGLEFKRKTISVNNPLLINDLIIYQTDWSILGIRLNLIKNDLNTTTIQLPILKLNNTSNQKIWVSSLPSL---KENIILLIKNNRGQISLYDNEGKFVKNINLGEDLNLXXXXXXXXXXVDLDFKNINFIDIISSTGIQIKSDPGVKLIYIGFLFLIISSLISYISFSELWLLKCSNRFLCGGKTNRAKVKFQIEFLTFQQSF 1311
            MIK F K LANLKLAI+ILLVI+++ SIG+++EQ R++ FY+ +YS  +F V +WKI+L  GLNNIYSTWWF  LL  LGLSL+CCTI+QQLPTLKFSRRYYFYKQI+Q+NKL  KI  IK F +HL + LL KQYS+FQQ N+ YAYKGLISRVGPIIVHLSIIC+L+GSTLGAL GFNSQELIP+TE+FH QN+IK G+FSS+PQKTFR+NDFW+ Y  N  IKQFY+D+S+LNG+G E +RKTISVNNPLL+ DLIIYQTDW ILG+RL  IKN  +  ++QLPI K+N TSNQKIW+SSLPS+   K++ I+LIK+NRGQISLY+NEGKF+K+ N+G+ L             + D  ++N ID+ISSTGIQIKSDPG+KLIY GF FLI SSLISYISFSE WLL    + + GGKTNRAKVK+ +EFL F+QSF
Sbjct:    1 MIKRFFKYLANLKLAILILLVISVVISIGTVIEQNREILFYQKSYSTLIFTVPVWKILLFFGLNNIYSTWWFLLLLGLLGLSLACCTIIQQLPTLKFSRRYYFYKQINQYNKLQIKINAIKVFPSHLGHTLLNKQYSLFQQANSFYAYKGLISRVGPIIVHLSIICVLLGSTLGALKGFNSQELIPKTEVFHIQNLIKNGVFSSVPQKTFRVNDFWSIYTSNGLIKQFYTDLSILNGQGKEVQRKTISVNNPLLLQDLIIYQTDWGILGLRLKYIKNTTSKISLQLPISKIN-TSNQKIWISSLPSIQKDKKSFIILIKDNRGQISLYNNEGKFLKSSNIGDIL------------YNTDSIDLNLIDVISSTGIQIKSDPGIKLIYFGFFFLIFSSLISYISFSEFWLLYFPLKVISGGKTNRAKVKYNLEFLNFKQSF 427          
BLAST of mRNA_H-paniculata_contig42540.10874.1 vs. uniprot
Match: A0A8F0F9K1_9PHAE (Cytochrome c biogenesis protein CcsB n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9K1_9PHAE)

HSP 1 Score: 567 bits (1462), Expect = 1.950e-199
Identity = 293/440 (66.59%), Postives = 355/440 (80.68%), Query Frame = 1
Query:    1 MIKAFLKKLANLKLAIIILLVIAIITSIGSIVEQGRDLAFYKNNYSVSLFGVTIWKIILAIGLNNIYSTWWFFCLLFTLGLSLSCCTILQQLPTLKFSRRYYFYKQISQFNKLPFKIKRIKAFQTHLSYALLTKQYSVFQQYNTIYAYKGLISRVGPIIVHLSIICILIGSTLGALTGFNSQELIPETEIFHTQNIIKTGLFSSIPQKTFRINDFWATYNINNQIKQFYSDISVLNGKGLEFKRKTISVNNPLLINDLIIYQTDWSILGIRLNLIKNDLNTTTIQLPILKLNNTSNQKIWVSSLPSLKE---NIILLIKNNRGQISLYDNEGKFVKNINLGEDLNLXXXXXXXXXXVDLDFKNINFIDIISSTGIQIKSDPGVKLIYIGFLFLIISSLISYISFSELWLLKCSNRFLCGGKTNRAKVKFQIEFLTFQQSF 1311
            MIK F K LANLKLAI+IL+VIA+++SIGSIVEQ +D+ FY+ NYS  +F +  WKI+L +G NNIYSTWWF  LL  LGLSL+CCTILQQLPTLKFSRRYYFYKQ++Q+ KL FKIK IK F +HLSY LL K+YS+FQQ N+ YAYKGLISR+GPI+VHLSIICIL+GST+GAL GFNSQELIP+TE+FH QN+IK G FS IPQKTFRINDFW+ YN    IKQFY+DIS+LNG G E +RKTISVNNPLL++DLIIYQTDW ILG+RL  IK +++  ++QLPI K+N  S+QKIW+SSLP +KE   N ILLIK+NRGQISLY+N GKF++ IN+G+++               +  ++N IDIISSTGIQIKSDPG+KLIY GF FL++SSLIS+ISFSE WLL    + + GGKTNRAKVKF +EFL  +QSF
Sbjct:    1 MIKRFFKYLANLKLAIVILIVIALLSSIGSIVEQSKDILFYQKNYSTLIFNIPFWKILLFLGFNNIYSTWWFLLLLGILGLSLACCTILQQLPTLKFSRRYYFYKQVNQYKKLTFKIKAIKVFPSHLSYTLLKKEYSLFQQSNSFYAYKGLISRLGPIVVHLSIICILLGSTVGALKGFNSQELIPKTEVFHIQNVIKNGFFSLIPQKTFRINDFWSIYNSTGSIKQFYTDISILNGDGTETQRKTISVNNPLLLSDLIIYQTDWGILGLRLKFIKKNISNISLQLPISKIN-ISSQKIWISSLPDIKEDKKNFILLIKDNRGQISLYNNMGKFLRTINIGDNI------------YQTNSLSLNLIDIISSTGIQIKSDPGIKLIYFGFFFLMLSSLISFISFSEFWLLYFPTKAIAGGKTNRAKVKFNLEFLKIKQSF 427          
BLAST of mRNA_H-paniculata_contig42540.10874.1 vs. uniprot
Match: A0A1I9LVB8_9PHAE (Cytochrome c biogenesis protein Ccs1 n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVB8_9PHAE)

HSP 1 Score: 563 bits (1450), Expect = 1.250e-197
Identity = 287/440 (65.23%), Postives = 355/440 (80.68%), Query Frame = 1
Query:    1 MIKAFLKKLANLKLAIIILLVIAIITSIGSIVEQGRDLAFYKNNYSVSLFGVTIWKIILAIGLNNIYSTWWFFCLLFTLGLSLSCCTILQQLPTLKFSRRYYFYKQISQFNKLPFKIKRIKAFQTHLSYALLTKQYSVFQQYNTIYAYKGLISRVGPIIVHLSIICILIGSTLGALTGFNSQELIPETEIFHTQNIIKTGLFSSIPQKTFRINDFWATYNINNQIKQFYSDISVLNGKGLEFKRKTISVNNPLLINDLIIYQTDWSILGIRLNLIKNDLNTTTIQLPILKLNNTSNQKIWVSSLPSLKEN---IILLIKNNRGQISLYDNEGKFVKNINLGEDLNLXXXXXXXXXXVDLDFKNINFIDIISSTGIQIKSDPGVKLIYIGFLFLIISSLISYISFSELWLLKCSNRFLCGGKTNRAKVKFQIEFLTFQQSF 1311
            MIK F K LANLKLAI+ILLVI+++  IG+I+EQ ++L FY+ NYS+ +F + +WKIIL +G +NIYSTWWF  LL  LGLSL+CCTI+QQLPTLKFSRRYYFYKQI+Q+NKL  KI  IK F +HLS+ LL KQYS+FQQ+N+ YAYKGLISRVGPI+VH+SIIC+L+GST+GALTGFNSQELIP+TE+FH QN+IK G FSSIPQKTFRINDFW+ Y  N  IKQFYSDIS+LNG G E +RKTISVNNPLL+ +LI+YQTDW ILG+RL  IK D +   +QLPI K+N TSNQK+W+SS+PS+++N    I+LIK+NRGQI+LY+NEGKF+K+ N+G+ +               D   +  +DIISSTGIQIKSDPG++LIY GF FL++SSLISYISFSE WLL    + + GGKTNRAKVK+ +EFL F+QSF
Sbjct:    1 MIKHFFKYLANLKLAILILLVISVVIGIGTIIEQNKELLFYQKNYSILIFSIPLWKIILFLGFDNIYSTWWFLLLLSILGLSLACCTIIQQLPTLKFSRRYYFYKQINQYNKLQVKINAIKVFPSHLSHTLLNKQYSLFQQFNSFYAYKGLISRVGPIVVHISIICVLLGSTVGALTGFNSQELIPKTEVFHIQNVIKNGFFSSIPQKTFRINDFWSIYTTNGLIKQFYSDISILNGGGKELQRKTISVNNPLLLKELIVYQTDWGILGLRLKYIKKDTSKINLQLPISKIN-TSNQKLWISSIPSVQKNNKSFIVLIKDNRGQINLYNNEGKFIKSSNIGDII------------YSTDVIGLTLMDIISSTGIQIKSDPGIQLIYFGFFFLMLSSLISYISFSEFWLLYFPLKVISGGKTNRAKVKYNLEFLQFKQSF 427          
BLAST of mRNA_H-paniculata_contig42540.10874.1 vs. uniprot
Match: A0A6B7EXL7_9PHAE (Cytochrome c biogenesis protein CcsB n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EXL7_9PHAE)

HSP 1 Score: 560 bits (1444), Expect = 1.020e-196
Identity = 290/440 (65.91%), Postives = 353/440 (80.23%), Query Frame = 1
Query:    1 MIKAFLKKLANLKLAIIILLVIAIITSIGSIVEQGRDLAFYKNNYSVSLFGVTIWKIILAIGLNNIYSTWWFFCLLFTLGLSLSCCTILQQLPTLKFSRRYYFYKQISQFNKLPFKIKRIKAFQTHLSYALLTKQYSVFQQYNTIYAYKGLISRVGPIIVHLSIICILIGSTLGALTGFNSQELIPETEIFHTQNIIKTGLFSSIPQKTFRINDFWATYNINNQIKQFYSDISVLNGKGLEFKRKTISVNNPLLINDLIIYQTDWSILGIRLNLIKNDLNTTTIQLPILKLNNTSNQKIWVSSLPSLKEN---IILLIKNNRGQISLYDNEGKFVKNINLGEDLNLXXXXXXXXXXVDLDFKNINFIDIISSTGIQIKSDPGVKLIYIGFLFLIISSLISYISFSELWLLKCSNRFLCGGKTNRAKVKFQIEFLTFQQSF 1311
            MIK F K LANLKLAI+ILLVI+++ SIG+I+EQ +++ FY+ NYS  +F + +W+I+L  GLNNIYS WWFF LL  LGLSL+CCTI+QQLPTLKFSRRYYFYKQI+Q+NKL  KI  IK F +HLS+ LL KQYS+FQQ N+ YAYKGLISRVGPI+VHLSIICIL GSTLGAL GFNSQELIP+TE+FH QN+IK G FSSI QKTFR+NDFW+ Y  N  IKQFY+D S+LNG G E +RKTISVNNPLL+ DLIIYQTDW ILG+RL   K++ +  ++QLPI K+N TSNQKIW+SSLPS+++N    I+LIK+NRGQISLY+NEGKF+K+ N+G+ +             ++D   +N ID+ISSTGIQIKSDPG++LIY GF FLI SSLISYISFSE WLL    + + GGKTNRAKVK+ +EFL F+QSF
Sbjct:    1 MIKRFFKYLANLKLAILILLVISLVISIGTIIEQNKEIIFYQKNYSTLIFNLPLWRILLFFGLNNIYSAWWFFFLLGLLGLSLACCTIIQQLPTLKFSRRYYFYKQINQYNKLQTKINAIKVFPSHLSHTLLNKQYSLFQQSNSFYAYKGLISRVGPIVVHLSIICILAGSTLGALKGFNSQELIPKTEVFHIQNVIKNGFFSSINQKTFRVNDFWSIYTTNGLIKQFYTDFSILNGNGKEIQRKTISVNNPLLLKDLIIYQTDWGILGLRLKYFKDNTSRVSLQLPISKIN-TSNQKIWISSLPSVQKNTNSFIVLIKDNRGQISLYNNEGKFIKSSNIGDMI------------YNIDNIGLNLIDVISSTGIQIKSDPGIQLIYFGFFFLIFSSLISYISFSEFWLLYSPMKVISGGKTNRAKVKYNLEFLNFKQSF 427          
BLAST of mRNA_H-paniculata_contig42540.10874.1 vs. uniprot
Match: A0A6G6D7H5_ECTSI (Cytochrome c biogenesis protein CcsB n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=A0A6G6D7H5_ECTSI)

HSP 1 Score: 553 bits (1426), Expect = 5.570e-194
Identity = 283/440 (64.32%), Postives = 351/440 (79.77%), Query Frame = 1
Query:    1 MIKAFLKKLANLKLAIIILLVIAIITSIGSIVEQGRDLAFYKNNYSVSLFGVTIWKIILAIGLNNIYSTWWFFCLLFTLGLSLSCCTILQQLPTLKFSRRYYFYKQISQFNKLPFKIKRIKAFQTHLSYALLTKQYSVFQQYNTIYAYKGLISRVGPIIVHLSIICILIGSTLGALTGFNSQELIPETEIFHTQNIIKTGLFSSIPQKTFRINDFWATYNINNQIKQFYSDISVLNGKGLEFKRKTISVNNPLLINDLIIYQTDWSILGIRLNLIKNDLNTTTIQLPILKLNNTSNQKIWVSSLPSLKEN---IILLIKNNRGQISLYDNEGKFVKNINLGEDLNLXXXXXXXXXXVDLDFKNINFIDIISSTGIQIKSDPGVKLIYIGFLFLIISSLISYISFSELWLLKCSNRFLCGGKTNRAKVKFQIEFLTFQQSF 1311
            MIK F K LANLKLAIIILL+I+++ SIG+I+EQ +++ FY+ NYS  +F + +WK+IL +GLNNIYSTWWF  LL  LGLSL+CCT++QQLPTLKFSRRYYFYKQ++Q+ KL  KI  IK F +HLS+ LL K+YS+FQQ N+ YAYKGLISR+GPI+VHLSIIC+L+GSTLGAL GFNSQELIP+TE+FH QN+IK G FSSIPQKTFR+NDFW+ Y  +  IKQFY+DIS+LNG G E +RKTISVNNPLL+ DLIIYQTDW ILG+RL    + ++   +QLPI K+N TSNQKIW+SSLPS+ +N    I+LIK+NRGQ+SLY+NEGKF+K+ N+G+ +             + D   +N IDIISSTGIQIK DPG++LIY GF FLI SSLISYISFSE WLL    + + GG+TNRAKVK+ +EFL F+QSF
Sbjct:    1 MIKRFFKYLANLKLAIIILLIISLVISIGTIIEQNKEILFYQKNYSALIFNLPLWKVILFLGLNNIYSTWWFLLLLGILGLSLACCTMIQQLPTLKFSRRYYFYKQVNQYKKLQIKINAIKVFPSHLSHTLLDKEYSLFQQSNSFYAYKGLISRIGPIVVHLSIICVLLGSTLGALKGFNSQELIPKTELFHIQNVIKNGFFSSIPQKTFRVNDFWSIYTPSGLIKQFYTDISILNGGGKEIQRKTISVNNPLLLKDLIIYQTDWGILGLRLKYTNDSISKLILQLPISKIN-TSNQKIWISSLPSVGKNSTSFIVLIKDNRGQVSLYNNEGKFIKSTNIGDMI------------YNTDLMGLNLIDIISSTGIQIKCDPGIQLIYFGFFFLIFSSLISYISFSEFWLLYFPFKVISGGRTNRAKVKYNLEFLNFKQSF 427          
BLAST of mRNA_H-paniculata_contig42540.10874.1 vs. uniprot
Match: A0A2R4QPS3_9PHAE (Cytochrome c biogenesis protein CcsB n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPS3_9PHAE)

HSP 1 Score: 552 bits (1423), Expect = 2.040e-193
Identity = 287/443 (64.79%), Postives = 351/443 (79.23%), Query Frame = 1
Query:    1 MIKAFLKKLANLKLAIIILLVIAIITSIGSIVEQGRDLAFYKNNYSVSLFGVTIWKIILAIGLNNIYSTWWFFCLLFTLGLSLSCCTILQQLPTLKFSRRYYFYKQISQFNKLPFKIKRIKAFQTHLSYALLTKQYSVFQQYNTIYAYKGLISRVGPIIVHLSIICILIGSTLGALTGFNSQELIPETEIFHTQNIIKTGLFSSIPQKTFRINDFWATYNINNQIKQFYSDISVLNGKGLEFKRKTISVNNPLLINDLIIYQTDWSILGIRLNLIKNDLNTTTI--QLPILKLNNTSNQKIWVSSLPSLKENI---ILLIKNNRGQISLYDNEGKFVKNINLGEDLNLXXXXXXXXXXVDLDFKNINFIDIISSTGIQIKSDPGVKLIYIGFLFLIISSLISYISFSELWLLKCSNRFLCGGKTNRAKVKFQIEFLTFQQSFI 1314
            MIK   K LANLKLAI+ILL+IA++ SIGS +EQ +++ FY+N Y + +F +  WKII+ +G NNIYSTWWF  LL   G+SL+CCTILQQLPTLKFSRRYYFYKQ +Q+NKL F I   K F THLSY L+ KQYS+FQQ NT YAYKGLISR+GPIIVH+SIICIL+GSTLG+L GFNSQE+IP+TE+FH QNII+ G+FSSIPQKTFRINDFW+ Y  N  IKQFY+DIS+LNG+GLE +RKTISVNNPLL+ DLIIYQTDW ILG+RL    N  N   I  Q+PI K N T N+KIW+S+LP +  N+   I+LI++NRGQ++LY++EGKF+KNIN+G++L             ++   N+ F DIISSTGIQIKSDPG+KLIY GF FLIISSLISYISFSE+WLL   N+ + GGKTNRAKVKF +EF+ F+QSF+
Sbjct:    1 MIKRIFKYLANLKLAILILLLIAVVISIGSFIEQNKEIQFYQNTYLIQIFSIPFWKIIIFLGFNNIYSTWWFLILLMLFGVSLACCTILQQLPTLKFSRRYYFYKQKNQYNKLTFTINSSKVFPTHLSYNLINKQYSLFQQSNTFYAYKGLISRIGPIIVHISIICILLGSTLGSLNGFNSQEIIPKTEVFHIQNIIRNGIFSSIPQKTFRINDFWSIYTSNGFIKQFYTDISLLNGQGLETQRKTISVNNPLLLKDLIIYQTDWGILGLRLK--SNSKNNPLIIYQIPISKTN-TLNKKIWISALPRINNNLKRFIILIRDNRGQVTLYNSEGKFIKNINIGDNLG----------NENIKESNLKFTDIISSTGIQIKSDPGIKLIYFGFFFLIISSLISYISFSEVWLLYFPNKAISGGKTNRAKVKFNLEFVIFKQSFL 430          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42540.10874.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0F705_9PHAE1.000e-24379.55Cytochrome c biogenesis protein CcsB n=1 Tax=Proto... [more]
A0A516ICN0_9PHAE7.090e-20468.18Cytochrome c biogenesis protein CcsB n=27 Tax=Lami... [more]
A0A8F0FBU9_9PHAE2.260e-20367.50Cytochrome c biogenesis protein CcsB n=1 Tax=Desma... [more]
A0A8F0F7S4_9PHAE9.530e-20267.05Cytochrome c biogenesis protein CcsB n=2 Tax=Lamin... [more]
A0A344PF95_9PHAE6.590e-20066.82Cytochrome c biogenesis protein CcsB n=5 Tax=Scyto... [more]
A0A8F0F9K1_9PHAE1.950e-19966.59Cytochrome c biogenesis protein CcsB n=1 Tax=Chord... [more]
A0A1I9LVB8_9PHAE1.250e-19765.23Cytochrome c biogenesis protein Ccs1 n=1 Tax=Pleur... [more]
A0A6B7EXL7_9PHAE1.020e-19665.91Cytochrome c biogenesis protein CcsB n=1 Tax=Clado... [more]
A0A6G6D7H5_ECTSI5.570e-19464.32Cytochrome c biogenesis protein CcsB n=2 Tax=Ectoc... [more]
A0A2R4QPS3_9PHAE2.040e-19364.79Cytochrome c biogenesis protein CcsB n=3 Tax=Fucac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig42540contigH-paniculata_contig42540:284..1609 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score553.1
Seed ortholog evalue1.2e-154
Seed eggNOG ortholog2880.D1J782
Preferred nameccs1
KEGG koko:K07399
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.cytochrome complex assembly
EggNOG OGs2QRFF@2759,COG1333@1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons1
Model size1326
Cds size1326
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930293.3339741-CDS-H-paniculata_contig42540:283..16091622930293.3339741-CDS-H-paniculata_contig42540:283..1609Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig42540 284..1609 -
1691481228.714871-CDS-H-paniculata_contig42540:283..16091691481228.714871-CDS-H-paniculata_contig42540:283..1609Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig42540 284..1609 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig42540.10874.1prot_H-paniculata_contig42540.10874.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig42540 284..1609 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig42540.10874.1

>prot_H-paniculata_contig42540.10874.1 ID=prot_H-paniculata_contig42540.10874.1|Name=mRNA_H-paniculata_contig42540.10874.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=442bp
MIKAFLKKLANLKLAIIILLVIAIITSIGSIVEQGRDLAFYKNNYSVSLF
GVTIWKIILAIGLNNIYSTWWFFCLLFTLGLSLSCCTILQQLPTLKFSRR
YYFYKQISQFNKLPFKIKRIKAFQTHLSYALLTKQYSVFQQYNTIYAYKG
LISRVGPIIVHLSIICILIGSTLGALTGFNSQELIPETEIFHTQNIIKTG
LFSSIPQKTFRINDFWATYNINNQIKQFYSDISVLNGKGLEFKRKTISVN
NPLLINDLIIYQTDWSILGIRLNLIKNDLNTTTIQLPILKLNNTSNQKIW
VSSLPSLKENIILLIKNNRGQISLYDNEGKFVKNINLGEDLNLNINLGED
LNLVDLDFKNINFIDIISSTGIQIKSDPGVKLIYIGFLFLIISSLISYIS
FSELWLLKCSNRFLCGGKTNRAKVKFQIEFLTFQQSFIMND*
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mRNA from alignment at H-paniculata_contig42540:284..1609-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig42540.10874.1 ID=mRNA_H-paniculata_contig42540.10874.1|Name=mRNA_H-paniculata_contig42540.10874.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1326bp|location=Sequence derived from alignment at H-paniculata_contig42540:284..1609- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATTAAAGCATTTTTAAAAAAATTAGCCAATTTGAAACTCGCAATAAT AATTCTTTTAGTTATTGCAATCATTACTAGTATTGGTTCGATTGTTGAAC AAGGGCGAGATCTTGCATTTTATAAAAATAACTATTCCGTTTCTCTTTTT GGAGTAACGATTTGGAAAATTATTCTCGCAATCGGCTTAAATAATATATA TAGTACGTGGTGGTTTTTCTGTCTACTTTTCACATTAGGACTTTCATTGT CATGCTGCACAATTCTTCAACAATTACCAACTTTGAAATTTTCTCGTCGA TATTATTTTTATAAACAAATAAGTCAATTTAATAAATTACCATTTAAAAT AAAAAGAATTAAAGCTTTTCAAACTCATTTGAGTTATGCTTTACTAACGA AACAATATTCTGTGTTCCAACAATATAATACTATTTATGCATATAAAGGA TTAATAAGTAGAGTTGGTCCAATTATAGTTCATTTAAGTATTATTTGTAT TTTAATTGGAAGTACATTAGGAGCCCTCACAGGGTTTAATTCTCAAGAAT TAATACCTGAAACGGAAATATTTCATACTCAAAATATTATAAAAACTGGT TTATTTTCTTCAATACCGCAAAAAACATTTCGTATTAATGATTTTTGGGC CACTTATAATATTAATAATCAAATTAAACAATTTTATTCTGATATTTCCG TATTAAATGGGAAAGGTTTAGAATTTAAGCGCAAAACTATTTCAGTAAAT AATCCATTACTTATTAATGACTTAATTATCTATCAAACAGATTGGAGTAT TTTAGGAATACGGCTAAATTTAATTAAAAATGATTTAAACACTACAACTA TTCAGCTTCCAATATTAAAACTAAATAATACTTCAAATCAAAAAATTTGG GTAAGTTCATTGCCAAGTCTAAAAGAAAATATTATTTTATTAATAAAAAA TAATCGAGGACAAATAAGTTTATATGATAACGAAGGGAAGTTTGTAAAAA ATATAAATTTAGGTGAAGATCTTAACCTAAATATAAATTTAGGTGAAGAT CTTAACCTAGTAGATTTAGATTTTAAAAATATAAATTTTATAGATATTAT TTCGTCGACGGGTATACAAATTAAATCTGATCCAGGTGTCAAACTAATAT ATATCGGATTTTTATTTTTAATTATCAGCAGTTTAATAAGTTACATATCA TTCTCTGAATTATGGTTATTAAAATGTTCTAATAGATTCTTATGTGGTGG TAAGACGAATCGAGCGAAGGTAAAATTTCAGATCGAATTTTTAACATTCC AACAATCATTTATAATGAATGATTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig42540:284..1609-

>mRNA_H-paniculata_contig42540.10874.1 ID=mRNA_H-paniculata_contig42540.10874.1|Name=mRNA_H-paniculata_contig42540.10874.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2652bp|location=Sequence derived from alignment at H-paniculata_contig42540:284..1609- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATTAAAGCATTTTTAAAAAAATTAGCCAATTTGAAACTCGCAATAAT
AATTCTTTTAGTTATTGCAATCATTACTAGTATTGGTTCGATTGTTGAAC
AAGGGCGAGATCTTGCATTTTATAAAAATAACTATTCCGTTTCTCTTTTT
GGAGTAACGATTTGGAAAATTATTCTCGCAATCGGCTTAAATAATATATA
TAGTACGTGGTGGTTTTTCTGTCTACTTTTCACATTAGGACTTTCATTGT
CATGCTGCACAATTCTTCAACAATTACCAACTTTGAAATTTTCTCGTCGA
TATTATTTTTATAAACAAATAAGTCAATTTAATAAATTACCATTTAAAAT
AAAAAGAATTAAAGCTTTTCAAACTCATTTGAGTTATGCTTTACTAACGA
AACAATATTCTGTGTTCCAACAATATAATACTATTTATGCATATAAAGGA
TTAATAAGTAGAGTTGGTCCAATTATAGTTCATTTAAGTATTATTTGTAT
TTTAATTGGAAGTACATTAGGAGCCCTCACAGGGTTTAATTCTCAAGAAT
TAATACCTGAAACGGAAATATTTCATACTCAAAATATTATAAAAACTGGT
TTATTTTCTTCAATACCGCAAAAAACATTTCGTATTAATGATTTTTGGGC
CACTTATAATATTAATAATCAAATTAAACAATTTTATTCTGATATTTCCG
TATTAAATGGGAAAGGTTTAGAATTTAAGCGCAAAACTATTTCAGTAAAT
AATCCATTACTTATTAATGACTTAATTATCTATCAAACAGATTGGAGTAT
TTTAGGAATACGGCTAAATTTAATTAAAAATGATTTAAACACTACAACTA
TTCAGCTTCCAATATTAAAACTAAATAATACTTCAAATCAAAAAATTTGG
GTAAGTTCATTGCCAAGTCTAAAAGAAAATATTATTTTATTAATAAAAAA
TAATCGAGGACAAATAAGTTTATATGATAACGAAGGGAAGTTTGTAAAAA
ATATAAATTTAGGTGAAGATCTTAACCTAAATATAAATTTAGGTGAAGAT
CTTAACCTAGTAGATTTAGATTTTAAAAATATAAATTTTATAGATATTAT
TTCGTCGACGGGTATACAAATTAAATCTGATCCAGGTGTCAAACTAATAT
ATATCGGATTTTTATTTTTAATTATCAGCAGTTTAATAAGTTACATATCA
TTCTCTGAATTATGGTTATTAAAATGTTCTAATAGATTCTTATGTGGTGG
TAAGACGAATCGAGCGAAGGTAAAATTTCAGATCGAATTTTTAACATTCC
AACAATCATTTATAATGAATGATTGAATGATTAAAGCATTTTTAAAAAAA
TTAGCCAATTTGAAACTCGCAATAATAATTCTTTTAGTTATTGCAATCAT
TACTAGTATTGGTTCGATTGTTGAACAAGGGCGAGATCTTGCATTTTATA
AAAATAACTATTCCGTTTCTCTTTTTGGAGTAACGATTTGGAAAATTATT
CTCGCAATCGGCTTAAATAATATATATAGTACGTGGTGGTTTTTCTGTCT
ACTTTTCACATTAGGACTTTCATTGTCATGCTGCACAATTCTTCAACAAT
TACCAACTTTGAAATTTTCTCGTCGATATTATTTTTATAAACAAATAAGT
CAATTTAATAAATTACCATTTAAAATAAAAAGAATTAAAGCTTTTCAAAC
TCATTTGAGTTATGCTTTACTAACGAAACAATATTCTGTGTTCCAACAAT
ATAATACTATTTATGCATATAAAGGATTAATAAGTAGAGTTGGTCCAATT
ATAGTTCATTTAAGTATTATTTGTATTTTAATTGGAAGTACATTAGGAGC
CCTCACAGGGTTTAATTCTCAAGAATTAATACCTGAAACGGAAATATTTC
ATACTCAAAATATTATAAAAACTGGTTTATTTTCTTCAATACCGCAAAAA
ACATTTCGTATTAATGATTTTTGGGCCACTTATAATATTAATAATCAAAT
TAAACAATTTTATTCTGATATTTCCGTATTAAATGGGAAAGGTTTAGAAT
TTAAGCGCAAAACTATTTCAGTAAATAATCCATTACTTATTAATGACTTA
ATTATCTATCAAACAGATTGGAGTATTTTAGGAATACGGCTAAATTTAAT
TAAAAATGATTTAAACACTACAACTATTCAGCTTCCAATATTAAAACTAA
ATAATACTTCAAATCAAAAAATTTGGGTAAGTTCATTGCCAAGTCTAAAA
GAAAATATTATTTTATTAATAAAAAATAATCGAGGACAAATAAGTTTATA
TGATAACGAAGGGAAGTTTGTAAAAAATATAAATTTAGGTGAAGATCTTA
ACCTAAATATAAATTTAGGTGAAGATCTTAACCTAGTAGATTTAGATTTT
AAAAATATAAATTTTATAGATATTATTTCGTCGACGGGTATACAAATTAA
ATCTGATCCAGGTGTCAAACTAATATATATCGGATTTTTATTTTTAATTA
TCAGCAGTTTAATAAGTTACATATCATTCTCTGAATTATGGTTATTAAAA
TGTTCTAATAGATTCTTATGTGGTGGTAAGACGAATCGAGCGAAGGTAAA
ATTTCAGATCGAATTTTTAACATTCCAACAATCATTTATAATGAATGATT
GA
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