prot_H-paniculata_contig4254.10873.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4254.10873.1
Unique Nameprot_H-paniculata_contig4254.10873.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length311
Homology
BLAST of mRNA_H-paniculata_contig4254.10873.1 vs. uniprot
Match: D8LRG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRG2_ECTSI)

HSP 1 Score: 511 bits (1315), Expect = 3.600e-171
Identity = 244/314 (77.71%), Postives = 277/314 (88.22%), Query Frame = 0
Query:    1 MQSMTARLLAPDREG--GWFFLDNQLREPVVTNRISPSARYHNRPGIEKYRPMDNVFPKCLKGFKWDLEKLVTKLKVKLHEHAQGIAGYQFLAGCNLFRNELQE-RKGDQISAKEFRRVVEYKFGMKLDPDEALSLFHFLVPGTGDSIEIAEMVRVLVPNDYTDSWFSTRESTDMFGFQKAAPEKIVLQAKKMNVSGSWNLSLIEEKIREKIHERVGGTGVYEVQAAYGLFLDGRNTGLTKKGFKAQMHDKFSVVLSDKDVDDVFKKYDPKRTGSLDVHNFVLKIVSPEAQPEPWFRDRATYEFHVLNRAPMKK 311
            MQS   RLLAPDR G  GWFFLDNQ+RE VVTNRISPS+RYHNRPG+E Y+P+DNVFP+CLKGFKWD+ KLV KLKVKL E A+GIAGYQFLA C LFR+E+   RKGD+ISA++FR VVEYKFGMKLD DE LSLFH+LVPGTGDSI+I+ MVRVL P+DYTDSWF+TRESTDMFGF K  PEK+VLQAKKMNV GSWNL LIE KIREKI+ERVGGT ++EVQAAY LF DGRNTGLTKKGF+AQMHDKF+VVLS KDVDDVF+KYDPK TG LDVH+FV++++SP A+PEPWF ++ TYEFHVLNRAPMKK
Sbjct:    1 MQSFATRLLAPDRAGSNGWFFLDNQMREKVVTNRISPSSRYHNRPGVESYKPLDNVFPQCLKGFKWDMGKLVAKLKVKLREQAKGIAGYQFLAACKLFRSEVSSNRKGDRISAEDFRGVVEYKFGMKLDHDEVLSLFHYLVPGTGDSIDISSMVRVLEPDDYTDSWFNTRESTDMFGFTKPGPEKVVLQAKKMNVGGSWNLKLIEGKIREKIYERVGGTSLFEVQAAYTLFQDGRNTGLTKKGFQAQMHDKFAVVLSSKDVDDVFRKYDPKGTGKLDVHSFVVRLISPTAEPEPWFGNKDTYEFHVLNRAPMKK 314          
BLAST of mRNA_H-paniculata_contig4254.10873.1 vs. uniprot
Match: A0A835YQE8_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQE8_9STRA)

HSP 1 Score: 327 bits (839), Expect = 1.430e-100
Identity = 167/334 (50.00%), Postives = 226/334 (67.66%), Query Frame = 0
Query:    1 MQSMTARLLAPDREGGWFFLDNQLREPV---VTNRISPSARYHNRPGIEKYRPM--DNVFPKCLKGFKWDLEKLVTKLKVKLHEHAQGIAGYQFLAGCNLFRNELQERKGDQISAKEFRRVVEYKFGMKLDPD----------------EALSLFHFLVPGTGDSIEIAEMVRVLVPNDYTD-SWFSTRESTDMFGFQKAAPEKIVLQAKKMNVSGSWNLSLIEEKIREKIHERVGGTG-VYEVQAAYGLFLDGRNTGLTKKGFKAQMHDKFSVVLSDKDVDDVFKKYDPKRTGSLDVHNFVLKIVSPEAQPEPWFRDRATYEFHVLNRAPMKK 311
            ++SM  RLL P  E GWF L  QLR         RIS SAR+ + PG+    P+  +  FP  L+GFKWD+ KLV KLK K++EHAQG AGY FLA C +FR+EL ERKGD I+A+EFR VV  KF +  D                  E + LF  L PG G S+ I E+VR LVP DY + SWFSTR+STDM G++   P+K+VLQA++MN   +W + ++E+KIREK+HER GGTG +Y+VQA Y LFLDGRN G+T++ FKA +HDKF+++L+D +VD +F+++DP+ TG LD++ FV+++V  +A PEPWF+ R +Y+F    RAP K+
Sbjct:  145 VRSMVRRLLQPAPEDGWFMLSAQLRADACKEAETRISESARFKHTPGVVAQDPVPTNEEFPASLRGFKWDVNKLVQKLKCKINEHAQGHAGYLFLAACKIFRHELPERKGDMITAREFRDVVRAKFSLVCDEQGVTAAHXXXXXXXXXXECIDLFEMLEPGCGGSMPITELVRRLVPRDYIERSWFSTRDSTDMPGYEHGKPDKVVLQAQEMN-KHNWTVDILEDKIREKLHERSGGTGNLYQVQATYRLFLDGRNNGVTRERFKAHLHDKFAILLTDDEVDALFRRHDPENTGQLDLYKFVMRLVGVQAPPEPWFQGRESYDFRCGRRAPHKE 477          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4254.10873.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRG2_ECTSI3.600e-17177.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YQE8_9STRA1.430e-10050.00EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 104..284

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4254contigH-paniculata_contig4254:12635..15760 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4254.10873.1mRNA_H-paniculata_contig4254.10873.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4254 12635..15760 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4254.10873.1 ID=prot_H-paniculata_contig4254.10873.1|Name=mRNA_H-paniculata_contig4254.10873.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=311bp
MQSMTARLLAPDREGGWFFLDNQLREPVVTNRISPSARYHNRPGIEKYRP
MDNVFPKCLKGFKWDLEKLVTKLKVKLHEHAQGIAGYQFLAGCNLFRNEL
QERKGDQISAKEFRRVVEYKFGMKLDPDEALSLFHFLVPGTGDSIEIAEM
VRVLVPNDYTDSWFSTRESTDMFGFQKAAPEKIVLQAKKMNVSGSWNLSL
IEEKIREKIHERVGGTGVYEVQAAYGLFLDGRNTGLTKKGFKAQMHDKFS
VVLSDKDVDDVFKKYDPKRTGSLDVHNFVLKIVSPEAQPEPWFRDRATYE
FHVLNRAPMKK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair