prot_H-paniculata_contig4250.10860.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4250.10860.1
Unique Nameprot_H-paniculata_contig4250.10860.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length316
Homology
BLAST of mRNA_H-paniculata_contig4250.10860.1 vs. uniprot
Match: D7FI94_ECTSI (Intrafragellar transpot 52, osm-6-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI94_ECTSI)

HSP 1 Score: 426 bits (1096), Expect = 1.090e-142
Identity = 206/241 (85.48%), Postives = 226/241 (93.78%), Query Frame = 0
Query:    1 EAAPASEPSAPKGPGRLLVVASSDVFADSWLDKEENAKLCDVLVRWLLAEAGIKLSRKREYNITESRRVPNTESLADRLRCCLQESESLPKNFTKLFNDSLFGFDTKMIPEAVEAFSALGVKHEPLTLIPPAFEAPLPQLSGSVFPPILRDPPPPALDRFDLDEHFASDRIRLAQITNKCTTSDLEYYVRECGEIMGVTGLLAEDSPLSAGPIGILDHVFKKLIRYKMLNQEEGALDALPQ 241
            EAAPASEP+  KGPGRLLVVASSD+FAD WLDKEENAKLCDV +RWLL EAG++L R+REY +++SRRVPNTESLADRLRCCLQESESLPKNFTKLFNDSLFGFDTKMIPE VEAFS LGVKHEPLTLIPPAFE PLPQLS +VFPPI+R+PPPPALDRFDLDEHFASDRIRLAQITNKCT SDLEYYVRECGEIMGVTG L+E+SP S GP+G+LDHVFK+LIR+KMLNQEEGA+DALP+
Sbjct:  298 EAAPASEPAVRKGPGRLLVVASSDIFADPWLDKEENAKLCDVFMRWLLGEAGVRLPRRREYEVSDSRRVPNTESLADRLRCCLQESESLPKNFTKLFNDSLFGFDTKMIPETVEAFSLLGVKHEPLTLIPPAFECPLPQLSAAVFPPIMREPPPPALDRFDLDEHFASDRIRLAQITNKCTPSDLEYYVRECGEIMGVTGELSEESPASNGPMGVLDHVFKRLIRFKMLNQEEGAMDALPR 538          
BLAST of mRNA_H-paniculata_contig4250.10860.1 vs. uniprot
Match: A0A6H5JN49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN49_9PHAE)

HSP 1 Score: 400 bits (1029), Expect = 1.940e-132
Identity = 207/300 (69.00%), Postives = 225/300 (75.00%), Query Frame = 0
Query:    1 EAAPASEPSAPKGPGRLLVVASSDVFADSWLDKEENAKLCDVLVRWLLAEAGIKLSRKREYNITESRRVPNTESLADRLRCCLQESESLPKNFTKLFNDSLFGFDTKMIPEAVEAFSALGVKHEPLTLIPPAFEAPLPQLSGSVFPPILRDPPPPALDRFDLDEHFASDRIRLAQITNK-----------------------------------------------------------CTTSDLEYYVRECGEIMGVTGLLAEDSPLSAGPIGILDHVFKKLIRYKMLNQEEGALDALPQ 241
            EAAPASEP+  KGPGRLLVVASSD+FAD WLDKEENAKLCDV +RWLL E G++L R+REY ++ESRRVPNTESLADRLRCCLQESESLPKNFTKLFNDSLFGFDTKMIPE VEAFS LGVKHEPLTLIPPAFE PLPQLS +VFPPI+R+PPPPALDRFDLDEHFASDRIRLAQITNK                                                           CT SDLEYYVRECGEIMGVTG L+EDSP S GP+G+LDHVFK+LIR+KMLNQEEGA+DALP+
Sbjct:  257 EAAPASEPAVRKGPGRLLVVASSDIFADPWLDKEENAKLCDVFMRWLLGEVGVRLPRRREYGVSESRRVPNTESLADRLRCCLQESESLPKNFTKLFNDSLFGFDTKMIPETVEAFSLLGVKHEPLTLIPPAFECPLPQLSAAVFPPIMREPPPPALDRFDLDEHFASDRIRLAQITNKDKSTRGVPGNLRKLAATLNRDTAEVESGGTCVVSRMLDAFLLAMHTRRRTPRPGLRPTQCTPSDLEYYVRECGEIMGVTGELSEDSPASNGPMGVLDHVFKRLIRFKMLNQEEGAMDALPR 556          
BLAST of mRNA_H-paniculata_contig4250.10860.1 vs. uniprot
Match: A0A836CAI6_9STRA (Intrafragellar transport 52, osm-6-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAI6_9STRA)

HSP 1 Score: 305 bits (780), Expect = 7.910e-97
Identity = 150/221 (67.87%), Postives = 181/221 (81.90%), Query Frame = 0
Query:   13 GPGRLLVVASSDVFADSWLDKEENAKLCDVLVRWLLAEAGIKLSRKREYNITESRRVPNTESLADRLRCCLQESESLPKNFTKLFNDSLFGFDTKMIPEAVEAFSALGVKHEPLTLIPPAFEAPLPQLSGSVFPPILRDPPPPALDRFDLDEHFASDRIRLAQITNKCTTSD-LEYYVRECGEIMGVTGLLAEDSPLSAGPIGILDHVFKKLIRYKMLNQE 232
            GPGRLLVVAS+++F+D W+DKEEN KL DVLVRWLL E G+KL ++REY+I+E  RVPN+E+LADRLRCCLQE+E LP++FTKLFN++LF FD  +IPEAV  +  L VKHEPLTLIPP FE PLP L+ +VFPP  R+PPPP LD FDLDEHFASD IRLAQ+TNKC  SD LEYY++E GEI+GV G L E SP  A P  IL H+F++L+R+KMLNQE
Sbjct:  217 GPGRLLVVASTEMFSDEWIDKEENGKLWDVLVRWLLGEGGVKLDQQREYDISEYTRVPNSEALADRLRCCLQETEELPRDFTKLFNENLFKFDMDVIPEAVALYEQLDVKHEPLTLIPPTFECPLPPLNPAVFPPAPREPPPPPLDLFDLDEHFASDAIRLAQLTNKCAGSDDLEYYIKEGGEILGVIGELPEGSP--AEPKHILHHIFRRLVRFKMLNQE 435          
BLAST of mRNA_H-paniculata_contig4250.10860.1 vs. uniprot
Match: A0A7S2G7V8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7V8_9STRA)

HSP 1 Score: 268 bits (685), Expect = 3.110e-83
Identity = 136/225 (60.44%), Postives = 172/225 (76.44%), Query Frame = 0
Query:   15 GRLLVVASSDVFADSWLDKEENAKLCDVLVRWLLAEAGIKLSRKREYNITESRRVPNTESLADRLRCCLQESESLPKNFTKLFNDSLFGFDTKMIPEAVEAFSALGVKHEPLTLIPPAFEAPLPQLSGSVFPPILRDPPPPALDRFDLDEHFASDRIRLAQITNKCTTS--DLEYYVRECGEIMGVTGLLAEDSPLSAGPIGILDHVFKKLIRYKMLNQEEGALD 237
            GR++VV+S  VF+D W+DKEEN+KL DVL RWL+ E  + L  +++  ++E  R+PNT+ LA+RLR CLQESE LPK+F KLFND+LF FDT +IPEAV  +  LGVKHEPL+LIPP FE PLP L+ +VFPP LR+ PPPALD+FDLDEHFAS R RLAQITNKCT S  DL+YYV+E GEI+GVT  L +D P       IL  +F++L+++K +NQE G LD
Sbjct:  247 GRVMVVSSLKVFSDEWIDKEENSKLADVLFRWLMQEKDVSLEDRKDAELSEYTRIPNTKVLAERLRSCLQESEELPKDFQKLFNDTLFKFDTNLIPEAVALYEQLGVKHEPLSLIPPQFETPLPPLNPAVFPPALRELPPPALDQFDLDEHFASPRQRLAQITNKCTGSADDLDYYVKESGEILGVTQQLGDD-PSQKTAKHILSFIFEELVKFKSVNQE-GPLD 469          
BLAST of mRNA_H-paniculata_contig4250.10860.1 vs. uniprot
Match: A0A7S3Y006_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y006_HETAK)

HSP 1 Score: 265 bits (676), Expect = 4.900e-83
Identity = 131/223 (58.74%), Postives = 167/223 (74.89%), Query Frame = 0
Query:   17 LLVVASSDVFADSWLDKEENAKLCDVLVRWLLAEAGIKLSRKREYNITESRRVPNTESLADRLRCCLQESESLPKNFTKLFNDSLFGFDTKMIPEAVEAFSALGVKHEPLTLIPPAFEAPLPQLSGSVFPPILRDPPPPALDRFDLDEHFASDRIRLAQITNKCT-----TSDLEYYVRECGEIMGVTGLLAEDSPLSAGPIGILDHVFKKLIRYKMLNQEEG 234
            L+VV+S ++FAD WLDKEEN  L +VL+RWLL E G++L  +REY++ E +R P+TE++AD L+ CLQ++E LPKNFT LFND LF FDT +IPEAV  +  L VKHEPL+LIPP FE PLP L  +VFPP L++PP PALD+FDLDEHFAS+R+RLAQ+TNKC        DLEYYVR  GE++GV   L E       P GIL HVFK+++++K LNQ+ G
Sbjct:  137 LVVVSSVEIFADEWLDKEENQPLMEVLLRWLLHEGGVRLEPQREYDLAEYQRAPSTEAVADGLKSCLQDTEVLPKNFTLLFNDGLFKFDTDLIPEAVALYGRLHVKHEPLSLIPPQFECPLPPLQPAVFPPALQEPPAPALDQFDLDEHFASERVRLAQLTNKCAGGGGGEEDLEYYVRAAGEVLGVVAELPE---AQRTPKGILFHVFKQVVQFKKLNQDGG 356          
BLAST of mRNA_H-paniculata_contig4250.10860.1 vs. uniprot
Match: A0A6A3U2F0_9STRA (Intraflagellar transport protein 52 n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A6A3U2F0_9STRA)

HSP 1 Score: 258 bits (659), Expect = 2.910e-79
Identity = 123/220 (55.91%), Postives = 167/220 (75.91%), Query Frame = 0
Query:   15 GRLLVVASSDVFADSWLDKEENAKLCDVLVRWLLAEAGIKLSRK--REYNITESRRVPNTESLADRLRCCLQESESLPKNFTKLFNDSLFGFDTKMIPEAVEAFSALGVKHEPLTLIPPAFEAPLPQLSGSVFPPILRDPPPPALDRFDLDEHFASDRIRLAQITNKCTTSDLEYYVRECGEIMGVTGLLAEDSPLSAGPIGILDHVFKKLIRYKMLNQE 232
            GRL+V  S+  F D W+DKEEN+KL +++ RWLL + GI+L+ +   + ++ E  R+P+T++L+DRLR C+QESE LPK+FT+LF+DSLF FDT +IPEAV  +  LGVKHEPLTLIPP FE PLP L  +VFPP LR+PPPPALD+FDLDEHFAS+ +RLAQ+TNKC+  DLEYYVRE  +I+G+   L    P  +    +L+ +F+K++ +K LNQ+
Sbjct:  202 GRLVVFGSAQCFVDEWIDKEENSKLQEIIFRWLLKDKGIRLNHQDAEDPDLNEYVRLPDTQALSDRLRSCMQESEELPKDFTRLFDDSLFKFDTSLIPEAVNLYRELGVKHEPLTLIPPQFECPLPPLKSAVFPPALREPPPPALDQFDLDEHFASESLRLAQLTNKCSDDDLEYYVRESADILGILPRL---DPERSDAKHVLEFIFQKIVNFKKLNQD 418          
BLAST of mRNA_H-paniculata_contig4250.10860.1 vs. uniprot
Match: H3GGX9_PHYRM (Uncharacterized protein n=21 Tax=Phytophthora TaxID=4783 RepID=H3GGX9_PHYRM)

HSP 1 Score: 258 bits (659), Expect = 7.580e-79
Identity = 123/220 (55.91%), Postives = 166/220 (75.45%), Query Frame = 0
Query:   15 GRLLVVASSDVFADSWLDKEENAKLCDVLVRWLLAEAGIKLSRK--REYNITESRRVPNTESLADRLRCCLQESESLPKNFTKLFNDSLFGFDTKMIPEAVEAFSALGVKHEPLTLIPPAFEAPLPQLSGSVFPPILRDPPPPALDRFDLDEHFASDRIRLAQITNKCTTSDLEYYVRECGEIMGVTGLLAEDSPLSAGPIGILDHVFKKLIRYKMLNQE 232
            GRL+V  S+  F D W+DKEEN KL +++ RWLL + GIKL+ +   + ++ E  R+P+T++L+DRLR C+QESE LPK+FT+LF+D+LF FDT +IPEAV  +  LGVKHEPLTLIPP FE PLP L  +VFPP LR+PPPPALD+FDLDEHFAS+ +RLAQ+TNKC+  DLEYYVRE  +I+G+   L    P  +    +L+ +F+K++ +K LNQ+
Sbjct:  239 GRLIVFGSAQCFTDEWIDKEENTKLQEIIFRWLLKDKGIKLNHQDAEDPDLNEYVRLPDTQALSDRLRSCMQESEELPKDFTRLFDDALFKFDTSLIPEAVNLYRELGVKHEPLTLIPPQFECPLPPLKSAVFPPALREPPPPALDQFDLDEHFASESLRLAQLTNKCSDDDLEYYVRESADILGILPRL---DPERSDAKHVLEFIFQKIVNFKKLNQD 455          
BLAST of mRNA_H-paniculata_contig4250.10860.1 vs. uniprot
Match: A0A8J6CAD8_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CAD8_DIALT)

HSP 1 Score: 253 bits (647), Expect = 5.840e-78
Identity = 121/225 (53.78%), Postives = 164/225 (72.89%), Query Frame = 0
Query:   15 GRLLVVASSDVFADSWLDKEENAKLCDVLVRWLLAEAGIKLSR--KREYNITESRRVPNTESLADRLRCCLQESESLPKNFTKLFNDSLFGFDTKMIPEAVEAFSALGVKHEPLTLIPPAFEAPLPQLSGSVFPPILRDPPPPALDRFDLDEHFASDRIRLAQITNKCTTSDLEYYVRECGEIMGVTGLLAEDSPLSAGPIGILDHVFKKLIRYKMLNQEEGALD 237
            GRL V+ SS +F D+W DK+EN KL +VLV+WLL   G+++      E  + E + VP+TESLA R+RCCL++SE + K+FT LF++SLF FDT +IPEAV+ +    VKHEPL+LIPP FE PLP L  +VFPP +R+PPPPALD FDLD+HFAS+R+RLA +TNKC+  DL+YY+RE G ++GVTG L  D   +     +L HVF +++ +K LNQE  A++
Sbjct:  212 GRLCVLGSSHIFEDAWFDKDENGKLAEVLVKWLLRADGVEMDPLDSDEIEVAEHKHVPDTESLAQRVRCCLEDSEEVTKDFTTLFDESLFKFDTSLIPEAVQLYKQFEVKHEPLSLIPPEFETPLPPLQPAVFPPSIREPPPPALDLFDLDDHFASERVRLAHLTNKCSEDDLDYYIREAGAVLGVTGSLPPDRRDARY---VLQHVFLQIVEWKKLNQEPEAME 433          
BLAST of mRNA_H-paniculata_contig4250.10860.1 vs. uniprot
Match: A0A0P1APT5_PLAHL (Intraflagellar transport protein 52 homolog n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APT5_PLAHL)

HSP 1 Score: 253 bits (646), Expect = 3.750e-77
Identity = 128/233 (54.94%), Postives = 171/233 (73.39%), Query Frame = 0
Query:    2 AAPASEPSAPKGPGRLLVVASSDVFADSWLDKEENAKLCDVLVRWLLAEAGIKLSRK--REYNITESRRVPNTESLADRLRCCLQESESLPKNFTKLFNDSLFGFDTKMIPEAVEAFSALGVKHEPLTLIPPAFEAPLPQLSGSVFPPILRDPPPPALDRFDLDEHFASDRIRLAQITNKCTTSDLEYYVRECGEIMGVTGLLAEDSPLSAGPIGILDHVFKKLIRYKMLNQE 232
            AAPAS+       GRL+V  S+  F D W+DKEENAKL +++ RWLL +  I L+ +   + ++ E  R+P+T++L+DRLR C+QESE LPK+FT+LF+DSLF FDT +IPEAV  +  LGVKHEPLTLIPP FE PLP L  +VFPP LR+PPPPALD+FDLDEHFAS+ +RLAQ+TNKC+  DLEYYVRE  +I+G+   L   +P  +    IL+ + +K++ +K LNQ+
Sbjct:  226 AAPASKS------GRLIVFGSTQCFVDEWIDKEENAKLQEIIFRWLLKDKTINLNHQDAEDPDLNEYVRLPDTQALSDRLRSCMQESEELPKDFTRLFDDSLFKFDTSLIPEAVNLYHDLGVKHEPLTLIPPQFECPLPPLKSAVFPPALREPPPPALDQFDLDEHFASETLRLAQLTNKCSDEDLEYYVRESADILGIMPRL---NPERSDAKHILEFITQKIVSFKKLNQD 449          
BLAST of mRNA_H-paniculata_contig4250.10860.1 vs. uniprot
Match: A0A7S2D5V8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D5V8_9STRA)

HSP 1 Score: 253 bits (647), Expect = 6.100e-77
Identity = 128/236 (54.24%), Postives = 172/236 (72.88%), Query Frame = 0
Query:    1 EAAPASEPSAPKGPGRLLVVASSDVFADSWLDKEENAKLCDVLVRWLLAEAGIKLSRKREYNITESRRVPNTESLADRLRCCLQESESLPKNFTKLFNDSLFGFDTKMIPEAVEAFSALGVKHEPLTLIPPAFEAPLPQLSGSVFPPILRDPPPPALDRFDLDEHFASDRIRLAQITNKCTTSDLEYYVRECGEIMGVTGLLAEDSPLSAGPIGILDHVFKKLIRYKMLNQEEGAL 236
            E  P ++  A K PGR++V+ S  +F+D W+DKEEN KL DVLVRWLL E+G++L   ++ +++E  RVP+T+ LA R+R CLQE+E LPK+F KLFND LF FDT +IPEA+  +  LGVKHEP++LIPP FE PLP L+ +VF   LR+    ALD+FDLDEHFAS R RLAQ+TNKC   DL+YYV+ECG+I+GVT  L  DS        IL  VF++L+++K +NQ++ A+
Sbjct:  243 EPPPYTKRRARKTPGRVMVLGSLKMFSDEWIDKEENGKLSDVLVRWLLHESGVELHHVKDSDLSEYVRVPDTKVLATRIRSCLQENEELPKDFQKLFNDKLFKFDTHLIPEAIALYDKLGVKHEPMSLIPPQFETPLPPLAPAVFXXXLREXXXXALDQFDLDEHFASPRQRLAQLTNKCNPDDLDYYVKECGDIIGVTQALG-DSGKVVTAADILSFVFEELVKFKSVNQDDLAM 477          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4250.10860.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI94_ECTSI1.090e-14285.48Intrafragellar transpot 52, osm-6-like protein n=1... [more]
A0A6H5JN49_9PHAE1.940e-13269.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CAI6_9STRA7.910e-9767.87Intrafragellar transport 52, osm-6-like protein (F... [more]
A0A7S2G7V8_9STRA3.110e-8360.44Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S3Y006_HETAK4.900e-8358.74Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6A3U2F0_9STRA2.910e-7955.91Intraflagellar transport protein 52 n=3 Tax=Perono... [more]
H3GGX9_PHYRM7.580e-7955.91Uncharacterized protein n=21 Tax=Phytophthora TaxI... [more]
A0A8J6CAD8_DIALT5.840e-7853.78Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A0P1APT5_PLAHL3.750e-7754.94Intraflagellar transport protein 52 homolog n=1 Ta... [more]
A0A7S2D5V8_9STRA6.100e-7754.24Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12969:SF7INTRAFLAGELLAR TRANSPORT PROTEIN 52 HOMOLOGcoord: 12..238
IPR039975Intraflagellar transport protein 52 homologPANTHERPTHR12969NGD5/OSM-6/IFT52coord: 12..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4250contigH-paniculata_contig4250:5146..10025 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4250.10860.1mRNA_H-paniculata_contig4250.10860.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4250 5146..10025 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4250.10860.1 ID=prot_H-paniculata_contig4250.10860.1|Name=mRNA_H-paniculata_contig4250.10860.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=316bp
EAAPASEPSAPKGPGRLLVVASSDVFADSWLDKEENAKLCDVLVRWLLAE
AGIKLSRKREYNITESRRVPNTESLADRLRCCLQESESLPKNFTKLFNDS
LFGFDTKMIPEAVEAFSALGVKHEPLTLIPPAFEAPLPQLSGSVFPPILR
DPPPPALDRFDLDEHFASDRIRLAQITNKCTTSDLEYYVRECGEIMGVTG
LLAEDSPLSAGPIGILDHVFKKLIRYKMLNQEEGALDALPQTSNSSTTTI
DRFGATVSSTIPGSLASGGSVSKNPGPAPGTALDNESAPPPSSDTTPRSS
VGNMTRRQNSSSSSAR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039975IFT52