prot_H-paniculata_contig4249.10854.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig4249.10854.1
Unique Name	prot_H-paniculata_contig4249.10854.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	129

Homology

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BLAST of mRNA_H-paniculata_contig4249.10854.1 vs. uniprot
Match: A0A7S3I595_9SPIT (UDP-glucuronate decarboxylase (Fragment) n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3I595_9SPIT)

HSP 1 Score: 190 bits (483), Expect = 3.870e-60
Identity = 90/123 (73.17%), Postives = 101/123 (82.11%), Query Frame = 0

Query:    6 VTGGAGFLGSHLCRRLLDEGHQVICLDNFFTSQKLNIQDLFDRPNFEFVRHDITEPFRAEVDQIYNLACPASPVHYQYNPIKTTKVMSWTCKQVSFFGAINMLGLAKRVNARMLQASTSEVSG 128
            VTGG GFLGSHLCRRL+D+GH+VICLDNFFTSQK N++DL D+PNFE VRHD+T PF  E DQIYN+ACPASPVHYQYNP+KT K         SF G +NMLGLAKRV AR+LQASTSEV G
Sbjct:    9 VTGGCGFLGSHLCRRLVDQGHEVICLDNFFTSQKTNVRDLLDKPNFELVRHDVTTPFFIECDQIYNMACPASPVHYQYNPVKTMKT--------SFLGTMNMLGLAKRVKARILQASTSEVYG 123

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BLAST of mRNA_H-paniculata_contig4249.10854.1 vs. uniprot
Match: A0A2R5FZD8_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FZD8_9STRA)

HSP 1 Score: 194 bits (494), Expect = 3.900e-59
Identity = 93/123 (75.61%), Postives = 104/123 (84.55%), Query Frame = 0

Query:    6 VTGGAGFLGSHLCRRLLDEGHQVICLDNFFTSQKLNIQDLFDRPNFEFVRHDITEPFRAEVDQIYNLACPASPVHYQYNPIKTTKVMSWTCKQVSFFGAINMLGLAKRVNARMLQASTSEVSG 128
            VTGGAGFLGSHLCRRL+ EGH+VICLDNFFTSQ++NI DL D+PNFE VRHD+TEPF AEVDQIYNLACPASPVHYQYNPIKT K         SF G++N+LGLAKR  +R+LQASTSEV G
Sbjct:   17 VTGGAGFLGSHLCRRLVAEGHEVICLDNFFTSQRINIADLLDKPNFELVRHDVTEPFHAEVDQIYNLACPASPVHYQYNPIKTMKT--------SFMGSMNLLGLAKRTKSRILQASTSEVYG 131

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BLAST of mRNA_H-paniculata_contig4249.10854.1 vs. uniprot
Match: A0A835YJC7_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJC7_9STRA)

HSP 1 Score: 196 bits (497), Expect = 4.240e-59
Identity = 97/123 (78.86%), Postives = 104/123 (84.55%), Query Frame = 0

Query:    6 VTGGAGFLGSHLCRRLLDEGHQVICLDNFFTSQKLNIQDLFDRPNFEFVRHDITEPFRAEVDQIYNLACPASPVHYQYNPIKTTKVMSWTCKQVSFFGAINMLGLAKRVNARMLQASTSEVSG 128
            VTGGAGFLGSHLCRRLL  GH+VICLDNFFTSQKLNI DL D PNFEFVRHD+T PF AEVD+I+NLACPASPVHYQYNPIKT K+        SF GA+NMLGLAKRV AR+LQASTSEV G
Sbjct:   43 VTGGAGFLGSHLCRRLLAAGHEVICLDNFFTSQKLNIVDLMDHPNFEFVRHDVTVPFFAEVDRIFNLACPASPVHYQYNPIKTAKI--------SFCGALNMLGLAKRVRARILQASTSEVYG 157

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BLAST of mRNA_H-paniculata_contig4249.10854.1 vs. uniprot
Match: A0A7S2WMC7_9STRA (UDP-glucuronate decarboxylase n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WMC7_9STRA)

HSP 1 Score: 194 bits (494), Expect = 9.260e-59
Identity = 92/123 (74.80%), Postives = 104/123 (84.55%), Query Frame = 0

Query:    6 VTGGAGFLGSHLCRRLLDEGHQVICLDNFFTSQKLNIQDLFDRPNFEFVRHDITEPFRAEVDQIYNLACPASPVHYQYNPIKTTKVMSWTCKQVSFFGAINMLGLAKRVNARMLQASTSEVSG 128
            VTGGAGFLG+HLCRRL++EGH+VICLDN+FT Q+LN+ DL D+PNFE +RHD+TEPF AEVDQIYNLACPASPVHYQYNPIKT KV        S  GA+NMLGLAKR  AR+LQASTSEV G
Sbjct:   48 VTGGAGFLGTHLCRRLVNEGHEVICLDNYFTGQRLNVTDLLDKPNFELIRHDVTEPFHAEVDQIYNLACPASPVHYQYNPIKTMKV--------SLLGAMNMLGLAKRTKARVLQASTSEVYG 162

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BLAST of mRNA_H-paniculata_contig4249.10854.1 vs. uniprot
Match: D7G944_ECTSI (UDP-glucuronate decarboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G944_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 1.200e-57
Identity = 85/86 (98.84%), Postives = 86/86 (100.00%), Query Frame = 0

Query:    6 VTGGAGFLGSHLCRRLLDEGHQVICLDNFFTSQKLNIQDLFDRPNFEFVRHDITEPFRAEVDQIYNLACPASPVHYQYNPIKTTKV 91
            VTGGAGFLGSHLCRRLLDEGHQVICLDNFFTSQKLNIQDLFDRPNFEFVRHDITEPFRAEVDQIYN+ACPASPVHYQYNPIKTTKV
Sbjct:   28 VTGGAGFLGSHLCRRLLDEGHQVICLDNFFTSQKLNIQDLFDRPNFEFVRHDITEPFRAEVDQIYNMACPASPVHYQYNPIKTTKV 113

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BLAST of mRNA_H-paniculata_contig4249.10854.1 vs. uniprot
Match: A0A0W8D3I2_PHYNI (UDP-glucuronate decarboxylase n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D3I2_PHYNI)

HSP 1 Score: 187 bits (474), Expect = 1.710e-57
Identity = 93/124 (75.00%), Postives = 103/124 (83.06%), Query Frame = 0

Query:    6 VTGGAGFLGSHLCRRLLDEGHQVICLDNFFTSQKLNIQDLFDR-PNFEFVRHDITEPFRAEVDQIYNLACPASPVHYQYNPIKTTKVMSWTCKQVSFFGAINMLGLAKRVNARMLQASTSEVSG 128
            VTGGAGF+G HLCRRLL++GH+VICLDN FTSQ+ N+ DL  R PNFEFVRHD+TEP+  EVDQIYNLACPASPVHYQYNPIKTTKV        SF GAIN+LGLAKRV AR+ QASTSEV G
Sbjct:    6 VTGGAGFIGIHLCRRLLEQGHEVICLDNLFTSQRANVLDLQMRYPNFEFVRHDVTEPYSCEVDQIYNLACPASPVHYQYNPIKTTKV--------SFMGAINVLGLAKRVKARVFQASTSEVYG 121

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BLAST of mRNA_H-paniculata_contig4249.10854.1 vs. uniprot
Match: A0A7S4LL95_9EUGL (UDP-glucuronate decarboxylase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LL95_9EUGL)

HSP 1 Score: 188 bits (478), Expect = 1.020e-56
Identity = 92/123 (74.80%), Postives = 102/123 (82.93%), Query Frame = 0

Query:    6 VTGGAGFLGSHLCRRLLDEGHQVICLDNFFTSQKLNIQDLFDRPNFEFVRHDITEPFRAEVDQIYNLACPASPVHYQYNPIKTTKVMSWTCKQVSFFGAINMLGLAKRVNARMLQASTSEVSG 128
            VTGGAGFLGSH+C RL+DEGH VICLDNFFTSQK NI+ LF RPNFEFVRHD+TEP R EVD+I+NLACPASPVHYQYNPIKT K         S+ GA NMLG+AKR NAR+LQ+STSEV G
Sbjct:   16 VTGGAGFLGSHVCERLVDEGHDVICLDNFFTSQKDNIRHLFGRPNFEFVRHDVTEPIRMEVDKIWNLACPASPVHYQYNPIKTMKT--------SWLGASNMLGMAKRCNARILQSSTSEVYG 130

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BLAST of mRNA_H-paniculata_contig4249.10854.1 vs. uniprot
Match: A0A2D6YTJ8_9BACT (UDP-glucuronate decarboxylase n=3 Tax=Phycisphaerae TaxID=666505 RepID=A0A2D6YTJ8_9BACT)

HSP 1 Score: 187 bits (476), Expect = 1.080e-56
Identity = 92/123 (74.80%), Postives = 101/123 (82.11%), Query Frame = 0

Query:    6 VTGGAGFLGSHLCRRLLDEGHQVICLDNFFTSQKLNIQDLFDRPNFEFVRHDITEPFRAEVDQIYNLACPASPVHYQYNPIKTTKVMSWTCKQVSFFGAINMLGLAKRVNARMLQASTSEVSG 128
            VTGGAGFLGSHLC RL+++GHQVICLDN FTSQK NIQ L DRPNFEFVRHD+ +P+  EVDQIYNLACPA+P HYQYNPIKT K         S  GAINMLGLAKR+NAR+LQASTSEV G
Sbjct:    7 VTGGAGFLGSHLCDRLVEQGHQVICLDNLFTSQKSNIQHLVDRPNFEFVRHDVIDPYTVEVDQIYNLACPAAPGHYQYNPIKTIKT--------SVMGAINMLGLAKRLNARILQASTSEVYG 121

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BLAST of mRNA_H-paniculata_contig4249.10854.1 vs. uniprot
Match: A0A7S3WE61_EMIHU (UDP-glucuronate decarboxylase (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WE61_EMIHU)

HSP 1 Score: 184 bits (466), Expect = 1.470e-56
Identity = 87/123 (70.73%), Postives = 99/123 (80.49%), Query Frame = 0

Query:    6 VTGGAGFLGSHLCRRLLDEGHQVICLDNFFTSQKLNIQDLFDRPNFEFVRHDITEPFRAEVDQIYNLACPASPVHYQYNPIKTTKVMSWTCKQVSFFGAINMLGLAKRVNARMLQASTSEVSG 128
            VTGGAGFLGSHLCRRL+ +GH+V+CLDNFFTSQK N+ DL  +PNFE +RHD+T PF  E DQIYN+ACPASPVHYQYNP+KT K         S  GA+NMLGLAKRV AR+LQASTSEV G
Sbjct:   17 VTGGAGFLGSHLCRRLVAQGHEVVCLDNFFTSQKTNVADLIGKPNFELIRHDVTTPFFIECDQIYNMACPASPVHYQYNPVKTMKT--------SVLGAMNMLGLAKRVKARLLQASTSEVYG 131

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BLAST of mRNA_H-paniculata_contig4249.10854.1 vs. uniprot
Match: A0A067D735_SAPPC (UDP-glucuronate decarboxylase n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D735_SAPPC)

HSP 1 Score: 187 bits (476), Expect = 1.530e-56
Identity = 92/123 (74.80%), Postives = 102/123 (82.93%), Query Frame = 0

Query:    6 VTGGAGFLGSHLCRRLLDEGHQVICLDNFFTSQKLNIQDLFDRPNFEFVRHDITEPFRAEVDQIYNLACPASPVHYQYNPIKTTKVMSWTCKQVSFFGAINMLGLAKRVNARMLQASTSEVSG 128
            VTGGAGFLG HLCRRLL+ GH VICLDN FTSQK+ ++DL    NFEFVRHD+T P+ AEVD+IYNLACPASPVHYQYNPIKTTKV        SF GAINMLGLAKR+NA++LQASTSEV G
Sbjct:   12 VTGGAGFLGLHLCRRLLEMGHDVICLDNLFTSQKIGLRDLQKYENFEFVRHDVTNPYHAEVDEIYNLACPASPVHYQYNPIKTTKV--------SFLGAINMLGLAKRLNAKILQASTSEVYG 126

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig4249.10854.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig4249.10854.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S3I595_9SPIT	3.870e-60	73.17	UDP-glucuronate decarboxylase (Fragment) n=1 Tax=F...	[more]
A0A2R5FZD8_9STRA	3.900e-59	75.61	UDP-glucuronate decarboxylase n=1 Tax=Hondaea ferm...	[more]
A0A835YJC7_9STRA	4.240e-59	78.86	UDP-glucuronate decarboxylase n=1 Tax=Tribonema mi...	[more]
A0A7S2WMC7_9STRA	9.260e-59	74.80	UDP-glucuronate decarboxylase n=1 Tax=labyrinthuli...	[more]
D7G944_ECTSI	1.200e-57	98.84	UDP-glucuronate decarboxylase n=1 Tax=Ectocarpus s...	[more]
A0A0W8D3I2_PHYNI	1.710e-57	75.00	UDP-glucuronate decarboxylase n=1 Tax=Phytophthora...	[more]
A0A7S4LL95_9EUGL	1.020e-56	74.80	UDP-glucuronate decarboxylase n=1 Tax=Eutreptiella...	[more]
A0A2D6YTJ8_9BACT	1.080e-56	74.80	UDP-glucuronate decarboxylase n=3 Tax=Phycisphaera...	[more]
A0A7S3WE61_EMIHU	1.470e-56	70.73	UDP-glucuronate decarboxylase (Fragment) n=1 Tax=E...	[more]
A0A067D735_SAPPC	1.530e-56	74.80	UDP-glucuronate decarboxylase n=1 Tax=Saprolegnia ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016040	NAD(P)-binding domain	PFAM	PF16363	GDP_Man_Dehyd	coord: 6..128 e-value: 1.3E-18 score: 67.5
None	No IPR available	GENE3D	3.40.50.720		coord: 5..127 e-value: 1.5E-35 score: 125.0
None	No IPR available	PANTHER	PTHR43078:SF6	UDP-GLUCURONIC ACID DECARBOXYLASE 1	coord: 6..127
None	No IPR available	PANTHER	PTHR43078	FAMILY NOT NAMED	coord: 6..127
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 6..127

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig4249	contig	H-paniculata_contig4249:13885..15264 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig4249.10854.1	mRNA_H-paniculata_contig4249.10854.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig4249 13389..16154 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig4249.10854.1 ID=prot_H-paniculata_contig4249.10854.1|Name=mRNA_H-paniculata_contig4249.10854.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=129bp
MVFRSVTGGAGFLGSHLCRRLLDEGHQVICLDNFFTSQKLNIQDLFDRPN
FEFVRHDITEPFRAEVDQIYNLACPASPVHYQYNPIKTTKVMSWTCKQVS
FFGAINMLGLAKRVNARMLQASTSEVSG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016040	NAD(P)-bd_dom
IPR036291	NAD(P)-bd_dom_sf