prot_H-paniculata_contig4246.10849.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig4246.10849.1
Unique Name	prot_H-paniculata_contig4246.10849.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	317

Homology

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BLAST of mRNA_H-paniculata_contig4246.10849.1 vs. uniprot
Match: D7G6W8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6W8_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 1.130e-56
Identity = 127/287 (44.25%), Postives = 174/287 (60.63%), Query Frame = 0

Query:   30 IHDVHELAYWCQWRLAISAACSRFDAAGETEAAAWSRERRDEINVANQAKLCSEIRHLEAQLGRLTSVNAKLEAALLKKEDELIKLEKRCVAARAAVGQLQAQLVREQQTSAASNSTLEGQLSRAEIARQGLEARLREVKNTKQAAEAFSAKLVEKCSNLEGGLEKTRKRTAELTAESQAERADAIAVKGDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDKLADVEKFQVSERGRALDRMEQELAEEKMTRVELEADRDDLQTQLYAALESSAQT 316
            I D H++AYW QWRLAI   C+RF+AA + EA AWSRER D ++++ Q  L SE+RHLE QLG+ TS+NAKLEAAL +    L   E   +AA A V +LQAQ+  +Q+T+ AS   LE ++S + IA QGLE  L++V+  K+ AEA    L+ + +  +  L + R   +    E++AE+    A++ DL                                      +DKLADVEKFQ S RG+ALDRMEQ+LA E+M RVELEADRDDLQ+QL AAL+++A++
Sbjct:   32 IVDAHDIAYWSQWRLAIHGVCARFEAAAQVEADAWSRERLDHVSISRQQALSSEVRHLETQLGKHTSMNAKLEAALCENAGALATAESARIAAAATVSRLQAQISYDQETAKASARDLEEKISLSTIAYQGLEESLQQVQEAKRQAEAKCEGLLRESARTDEELREARLAISRALEEARAEKERREALQSDLTALREKYSALKRRFVDAGRKVEAVRGERDALRQERATLQDKLADVEKFQSSNRGQALDRMEQDLASERMQRVELEADRDDLQSQLAAALQAAARS 318

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig4246.10849.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig4246.10849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G6W8_ECTSI	1.130e-56	44.25	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 144..178
None	No IPR available	COILS	Coil	Coil	coord: 221..269
None	No IPR available	COILS	Coil	Coil	coord: 278..305
None	No IPR available	COILS	Coil	Coil	coord: 84..132

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig4246	contig	H-paniculata_contig4246:7755..14983 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig4246.10849.1	mRNA_H-paniculata_contig4246.10849.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig4246 7313..15202 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig4246.10849.1 ID=prot_H-paniculata_contig4246.10849.1|Name=mRNA_H-paniculata_contig4246.10849.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=317bp
MTQLLNDTGLVRKGKRPRPFRPAVKVDTVIHDVHELAYWCQWRLAISAAC
SRFDAAGETEAAAWSRERRDEINVANQAKLCSEIRHLEAQLGRLTSVNAK
LEAALLKKEDELIKLEKRCVAARAAVGQLQAQLVREQQTSAASNSTLEGQ
LSRAEIARQGLEARLREVKNTKQAAEAFSAKLVEKCSNLEGGLEKTRKRT
AELTAESQAERADAIAVKGDLAALREKYSALKRRMAEAGRKVESVRAERD
SLRQDRAALEDKLADVEKFQVSERGRALDRMEQELAEEKMTRVELEADRD
DLQTQLYAALESSAQT*