mRNA_H-paniculata_contig42378.10835.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig42378.10835.1 vs. uniprot
Match: D8LFB6_ECTSI (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFB6_ECTSI) HSP 1 Score: 77.4 bits (189), Expect = 7.940e-16 Identity = 37/51 (72.55%), Postives = 45/51 (88.24%), Query Frame = 1
Query: 7 GAKIVNAIPTRRLGDPKELEGLLMLMASDNASSYMTGSVVTLDGGIALSNL 159
G +IV AIP RRLGDP EL+GLL+++AS+ ASSYMTGSV+TLDGGI LS+L
Sbjct: 210 GDRIVKAIPMRRLGDPSELDGLLLMLASERASSYMTGSVLTLDGGIMLSHL 260
BLAST of mRNA_H-paniculata_contig42378.10835.1 vs. uniprot
Match: A0A2E5Q5E8_9PROT (2-deoxy-D-gluconate 3-dehydrogenase n=4 Tax=root TaxID=1 RepID=A0A2E5Q5E8_9PROT) HSP 1 Score: 64.7 bits (156), Expect = 4.490e-11 Identity = 31/51 (60.78%), Postives = 42/51 (82.35%), Query Frame = 1
Query: 7 GAKIVNAIPTRRLGDPKELEGLLMLMASDNASSYMTGSVVTLDGGIALSNL 159
GA+++ IP RR+GDP EL+G+L+L+ASD ASSYMTGS++T+DGG S L
Sbjct: 207 GARMIKRIPMRRVGDPGELDGVLLLLASD-ASSYMTGSIITVDGGHLQSTL 256
BLAST of mRNA_H-paniculata_contig42378.10835.1 vs. uniprot
Match: A0A3L7E0Q7_9GAMM (SDR family oxidoreductase n=2 Tax=Seongchinamella sediminis TaxID=2283635 RepID=A0A3L7E0Q7_9GAMM) HSP 1 Score: 63.5 bits (153), Expect = 1.120e-10 Identity = 31/49 (63.27%), Postives = 42/49 (85.71%), Query Frame = 1
Query: 7 GAKIVNAIPTRRLGDPKELEGLLMLMASDNASSYMTGSVVTLDGGIALS 153
G +++ IP RRLG P+EL+G+L+L+AS NA SYMTGSVVT+DGG++LS
Sbjct: 199 GRQMLRRIPQRRLGSPEELDGVLLLLAS-NALSYMTGSVVTVDGGLSLS 246
BLAST of mRNA_H-paniculata_contig42378.10835.1 vs. uniprot
Match: A0A3D5FD65_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5FD65_9GAMM) HSP 1 Score: 57.8 bits (138), Expect = 5.590e-10 Identity = 29/51 (56.86%), Postives = 40/51 (78.43%), Query Frame = 1
Query: 7 GAKIVNAIPTRRLGDPKELEGLLMLMASDNASSYMTGSVVTLDGGIALSNL 159
GA++V +P RR+ +P EL+G L+L+AS ASSYMTGSV+T+DGG S+L
Sbjct: 6 GARMVQQVPQRRVAEPHELDGPLLLLAS-GASSYMTGSVITVDGGHLNSSL 55
BLAST of mRNA_H-paniculata_contig42378.10835.1 vs. uniprot
Match: A0A5C9A8T5_9GAMM (SDR family oxidoreductase n=1 Tax=Parahaliea maris TaxID=2716870 RepID=A0A5C9A8T5_9GAMM) HSP 1 Score: 61.2 bits (147), Expect = 8.610e-10 Identity = 28/51 (54.90%), Postives = 41/51 (80.39%), Query Frame = 1
Query: 7 GAKIVNAIPTRRLGDPKELEGLLMLMASDNASSYMTGSVVTLDGGIALSNL 159
G K+ IP RRLG+P +L+G+++L+AS ASSYMTGSV+T+DGG+ +S +
Sbjct: 206 GKKLEKRIPQRRLGNPADLDGVILLLAS-KASSYMTGSVITVDGGLTMSTI 255
BLAST of mRNA_H-paniculata_contig42378.10835.1 vs. uniprot
Match: A0A2A5DVH6_9PROT (2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2A5DVH6_9PROT) HSP 1 Score: 61.2 bits (147), Expect = 8.750e-10 Identity = 30/53 (56.60%), Postives = 43/53 (81.13%), Query Frame = 1
Query: 1 GQGAKIVNAIPTRRLGDPKELEGLLMLMASDNASSYMTGSVVTLDGGIALSNL 159
G+G +I IP RRLG P++L+G L+L+AS NASS+MTGSV+T+DGG +++ L
Sbjct: 206 GEGERIKQRIPLRRLGSPEDLDGALLLLAS-NASSFMTGSVLTVDGGQSVNPL 257
BLAST of mRNA_H-paniculata_contig42378.10835.1 vs. uniprot
Match: UPI0010C9F353 (glucose 1-dehydrogenase n=1 Tax=Rhodoligotrophos defluvii TaxID=2561934 RepID=UPI0010C9F353) HSP 1 Score: 60.8 bits (146), Expect = 1.270e-9 Identity = 28/50 (56.00%), Postives = 38/50 (76.00%), Query Frame = 1
Query: 4 QGAKIVNAIPTRRLGDPKELEGLLMLMASDNASSYMTGSVVTLDGGIALS 153
+G + IP R+GDP EL+G L+L+AS ASS+MTGSVVT+DGG ++S
Sbjct: 211 KGEYLKRGIPQNRIGDPSELDGALLLLASPRASSFMTGSVVTVDGGQSIS 260
BLAST of mRNA_H-paniculata_contig42378.10835.1 vs. uniprot
Match: A0A2Z4RGT7_PSEPU (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Pseudomonas putida TaxID=303 RepID=A0A2Z4RGT7_PSEPU) HSP 1 Score: 60.5 bits (145), Expect = 1.670e-9 Identity = 29/52 (55.77%), Postives = 42/52 (80.77%), Query Frame = 1
Query: 4 QGAKIVNAIPTRRLGDPKELEGLLMLMASDNASSYMTGSVVTLDGGIALSNL 159
QGA ++ IP +RLG P+EL+G L+L+A+ ASS+MTGSV+T+DGG +S+L
Sbjct: 206 QGAALIKRIPMQRLGTPQELDGALLLLATQ-ASSWMTGSVITVDGGHVISSL 256
BLAST of mRNA_H-paniculata_contig42378.10835.1 vs. uniprot
Match: A0A2S6UHS1_9PROT (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase n=1 Tax=Alphaproteobacteria bacterium MarineAlpha3_Bin4 TaxID=2013070 RepID=A0A2S6UHS1_9PROT) HSP 1 Score: 60.1 bits (144), Expect = 2.300e-9 Identity = 28/51 (54.90%), Postives = 41/51 (80.39%), Query Frame = 1
Query: 7 GAKIVNAIPTRRLGDPKELEGLLMLMASDNASSYMTGSVVTLDGGIALSNL 159
GAK++ IP RR+G P++L+G L+L+ASD AS YMTGS++ +DGG +S+L
Sbjct: 206 GAKLIRRIPQRRIGRPEDLDGSLLLLASD-ASGYMTGSIIPVDGGHLVSSL 255
BLAST of mRNA_H-paniculata_contig42378.10835.1 vs. uniprot
Match: UPI001866736D (glucose 1-dehydrogenase n=2 Tax=Nisaea TaxID=390876 RepID=UPI001866736D) HSP 1 Score: 60.1 bits (144), Expect = 2.320e-9 Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 1
Query: 7 GAKIVNAIPTRRLGDPKELEGLLMLMASDNASSYMTGSVVTLDGGIAL 150
G K+V IP RRLG P++L+G L+L+ASD + YMTGSVVT+DGG L
Sbjct: 209 GQKMVKTIPQRRLGQPEDLDGALLLLASDQGA-YMTGSVVTVDGGFVL 255 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42378.10835.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig42378.10835.1 >prot_H-paniculata_contig42378.10835.1 ID=prot_H-paniculata_contig42378.10835.1|Name=mRNA_H-paniculata_contig42378.10835.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=54bp GQGAKIVNAIPTRRLGDPKELEGLLMLMASDNASSYMTGSVVTLDGGIALback to top mRNA from alignment at H-paniculata_contig42378:1374..1535- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig42378.10835.1 ID=mRNA_H-paniculata_contig42378.10835.1|Name=mRNA_H-paniculata_contig42378.10835.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=162bp|location=Sequence derived from alignment at H-paniculata_contig42378:1374..1535- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig42378:1374..1535- >mRNA_H-paniculata_contig42378.10835.1 ID=mRNA_H-paniculata_contig42378.10835.1|Name=mRNA_H-paniculata_contig42378.10835.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=324bp|location=Sequence derived from alignment at H-paniculata_contig42378:1374..1535- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |