prot_H-paniculata_contig4220.10813.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4220.10813.1
Unique Nameprot_H-paniculata_contig4220.10813.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length661
Homology
BLAST of mRNA_H-paniculata_contig4220.10813.1 vs. uniprot
Match: A0A6H5KXC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXC9_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 6.320e-48
Identity = 266/827 (32.16%), Postives = 341/827 (41.23%), Query Frame = 0
Query:    4 MKSRAPLQ-RLSVEERVNHAVQAAVRRALDKQRRAQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEKRCQVVDDVSRLLGDELTGGDVSRITMGLEVLERE-------QQEQKGGEEWDGPYGRAWLLEVRRGWLNPRLSVVCILK-------------EEVGGGMSVGARGGRDRQG------------VVGGKEESGASGKESYLEENE-VGNARTSVGEE--GSFR-ARKGV--VAGAADERARVENSRMRSQDDEDILLSGV-----------------------------------------------DRPVCEIEDATRMGRSETAAPEDLDKFEPCDRTTPSNGLNRARTATAEISERTATASQDDSRNESQNRCDDEGLGKRSAVEDRQLPAA------------------------RAADGNVE---QLAAAVEGANSR--------------RMKSRVAEASLADLRGSLADVLVLSFRCGEEHAARQHHQGSWNSASPLPSLLANDGGLERLGAGDARSLMAAAAGVEDMED--------DNKQQDGVPDDRVCKAGTWWCGGGCESCETRAKAVHELLSRLQSTSVAQHRDIARMESSLVDLRDAIPTCTTXXXXXXXXXXXDFAPDSGTLRRSQGEKEDRESQRQRLLSSRSDLS-------AXXXXXXGHRGPMAVNGSLRRGDGGRAGTCSDGVGGRRDVRTEW---------------------------QEFEGLDAGPAHYHIGGSGGLGSPMVQGVLDRWIDVSKRRILEGWLAHVLHGGPVDAANGCFVPRVQISSLSKEVRD 661
            M++R P+  RLSVEERV HAV +AVRRAL +QR+ QE                     XXXXXXXXXX  +R  ++++++ LLG EL+ GDVSR+ MGLE +ERE       ++E  GG+E     GRAW+LE  R  L  +++V   L+             EE   G  VG  GG+D +G            V       GA G   +   +E V  AR S  E    S R AR+ V  +   A E  R E  +  +     + L+GV                                                RP C  E A  + R+E A        EP       +G   A  ATAE  ERT  A+          R  DE    + A E R    A                         A+DG       LAAA  G +++              +M +R +EASL+DLR +L  VL LSF CGEE A R+   G     +    L A     +  G GD  S++   AG+E +ED                                    E +A AV  LL RL++ +V Q  DIAR+E+SL  LR +  T T              +    + R   G     ES +        D+S       A        RG     G + +G+ GR G  S     +RD+RT+W                           QE +GLD    HY   G GGLGS  VQGVLDRWIDVSKR ILEGWL HVLHGGPVD+ANG FVPRVQ+SSLSKEVRD
Sbjct:    1 MEARPPVPLRLSVEERVEHAVSSAVRRALAEQRKTQEQELDSLSNVLQRSLAALAGERXXXXXXXXXXXXRRRNMIEELTSLLGGELSCGDVSRLAMGLERIEREAGPAAASEEEGDGGQE----RGRAWVLEQVRQCLFAKVAVQDQLRSSADEIAADMFEAEEGLMGFQVGPGGGQDAEGASPISRPPPPTDVAVAAVGPGADGGALWSARSESVARARASASEALATSLRLARRRVEQLEALALEVRRGERKKRAAV----VALAGVGEGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSDGSLSRPSCSQEGA--VDRAEEAGRPAAGSVEPG-----GDGGTCAAEATAE-GERTGAAA---------TRPADEAAADKQAQEPRGGATAGRTASXXXXXXXXXXXPLHPVKTDHASDGGKGASVSLAAAPGGGDAQPPPVSPESCEVERWKMAARRSEASLSDLRKNLGSVLALSFMCGEESARRR---GEGKEEAGGVRLAAGGEVDKEAGCGDPDSVLGVVAGLERVEDAAAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXFSPGEAKAAAVDVLLKRLEALTVDQGGDIARLEASLQALRGSSATPTAGAAG--------VSSSGNSGRGDLGGNAHEESAQAAAGLKADDVSDPKLHSPAAAAAAVAPRGEREQEGGVSKGEAGRRGRGSRDASPKRDIRTDWEIEYINRWHAWPPYSSAIGSKVIGVVQQELDGLDTHLGHYQ--GGGGLGSQAVQGVLDRWIDVSKRNILEGWLGHVLHGGPVDSANGSFVPRVQLSSLSKEVRD 789          
BLAST of mRNA_H-paniculata_contig4220.10813.1 vs. uniprot
Match: D8LD17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD17_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 2.050e-33
Identity = 201/652 (30.83%), Postives = 268/652 (41.10%), Query Frame = 0
Query:    4 MKSRAPLQ-RLSVEERVNHAVQAAVRRALDKQRRAQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEKRCQVVDDVSRLLGDELTGGDVSRITMGLEVLEREQQEQKGGEEWDGPY---GRAWLLE-----------VRRGWLNPRLSVVCILKEEVGGGMSVGARGGRDRQGVVGGKEESGASGKESYLEENEVGNARTSVGEEGSFRARKGVVAGAADERARVENSRMRSQDDEDILLSGVDRPVCEIEDATRMGRSETAAPEDLDKFEPCDRTT-PSNGLNRARTATAEISERTATASQDDSRNESQNRCDD-----EGLGKRSAVE----DRQLPAARAADGNVEQLAAAVEGANSRRMKSRVAEASLADLRGSLADVLVLSFRCGEEHAARQHHQGSWNSASPLPSLLANDGGLER-LGAGDARSLMAAAAGVEDMED-------DNKQQDGVPDDRVCKAGTWWCGGGCESCETRAKAVHELLSRLQSTSVAQHRDIARMESSLVDLR--DAIPTCTTXXXXXXXXXXXDFAPDSGTLRRSQGEKEDRESQRQRLLSSRSDLSAXXXXXXGHRGPMAVNGSLRRGDGGRAGTCSDGVGGRRDVRTEWQEFEGLDAGPAHYHIGGSGGLGSPMVQGVLDRWIDV 620
            M++R P+  RLSVEERV HAV +AVRRAL +QR+ QE                      XXXXXXXXX  +R  ++++++ LLG EL+ GDVSR+ MGLE +ERE                 GRAW+LE           VRRG    R + V +     GGG       G    G+  G                 VG A  S   +GS+        G A                                     G +  AA    D+     +   P  G    RTA++         + DD       + D      EG   R        D Q PAA +  G VE+           R+ +R +EASLADLR +L  VL LSF CGEE A R+   G    A  +   L  +GG+++  G GD  S++   A +E + D        +  ++ V        GT          E +A AV  LL RL++ SV Q  DIAR+E+SL  LR   A PT  T               D G   R +  +     + + +   +    A        RG     G + +G+ G+ G  S     +RD+RTEW+E +GLD    HY   G GGLGS  VQGVLDRWIDV
Sbjct:    1 MEARPPVPLRLSVEERVEHAVSSAVRRALAEQRKTQEEELDSLSDVLQRSLAALAGERDXXXXXXXXXXXRRRDMIEELTSLLGGELSCGDVSRLAMGLERIEREAGPAAAXXXXXXXXQERGRAWVLERVEQLEALALEVRRGEGKKRAAAVALAGVGEGGGAGEAVESGEPADGLDDGXXXXXXXXXXXDRAVEGVGGAGASASSDGSWSFPSCSQEGTAXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXRGGTGAAATRPADEAAADKQAQEPRGGATAGRTASS-------GGADDDGCPLLPVKADHASDGGEGTSGRLVAAPGGGDAQPPAASSEPGEVERW----------RVAARRSEASLADLRETLGSVLALSFMCGEESARRR---GKEEEAGGV--RLPTEGGVDKEAGCGDPDSVLGVVAALERVGDAAAAAAESSVSEEAVEGTGGTSVGTSRGRERFSPGEAKASAVDVLLKRLEALSVDQGGDIARLETSLQALRGSSATPTAATAGAAGVSSLGDSGRVDLGGSAREESAQAAAGLKAEDVSDPKLHSPAAAAAAVAPRGEGDHEGGVSKGEAGQGGRGSRDASPKRDIRTEWEELDGLDTHLGHYQ--GGGGLGSQAVQGVLDRWIDV 624          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4220.10813.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KXC9_9PHAE6.320e-4832.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD17_ECTSI2.050e-3330.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 28..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4220contigH-paniculata_contig4220:254..6936 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4220.10813.1mRNA_H-paniculata_contig4220.10813.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4220 254..6964 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4220.10813.1 ID=prot_H-paniculata_contig4220.10813.1|Name=mRNA_H-paniculata_contig4220.10813.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=661bp
MEPMKSRAPLQRLSVEERVNHAVQAAVRRALDKQRRAQERELDTLSDALQ
RSLAALAGERDRALRGLAAEEEKRCQVVDDVSRLLGDELTGGDVSRITMG
LEVLEREQQEQKGGEEWDGPYGRAWLLEVRRGWLNPRLSVVCILKEEVGG
GMSVGARGGRDRQGVVGGKEESGASGKESYLEENEVGNARTSVGEEGSFR
ARKGVVAGAADERARVENSRMRSQDDEDILLSGVDRPVCEIEDATRMGRS
ETAAPEDLDKFEPCDRTTPSNGLNRARTATAEISERTATASQDDSRNESQ
NRCDDEGLGKRSAVEDRQLPAARAADGNVEQLAAAVEGANSRRMKSRVAE
ASLADLRGSLADVLVLSFRCGEEHAARQHHQGSWNSASPLPSLLANDGGL
ERLGAGDARSLMAAAAGVEDMEDDNKQQDGVPDDRVCKAGTWWCGGGCES
CETRAKAVHELLSRLQSTSVAQHRDIARMESSLVDLRDAIPTCTTTSTTT
TTTTPPDFAPDSGTLRRSQGEKEDRESQRQRLLSSRSDLSADDDGGGGHR
GPMAVNGSLRRGDGGRAGTCSDGVGGRRDVRTEWQEFEGLDAGPAHYHIG
GSGGLGSPMVQGVLDRWIDVSKRRILEGWLAHVLHGGPVDAANGCFVPRV
QISSLSKEVRD
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