mRNA_H-paniculata_contig422.10812.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig422.10812.1
Unique NamemRNA_H-paniculata_contig422.10812.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig422.10812.1 vs. uniprot
Match: D7FMB0_ECTSI (Similar to Solute carrier family 25 (Mitochondrial carrier citrate transporter), member 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMB0_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 1.370e-79
Identity = 134/167 (80.24%), Postives = 143/167 (85.63%), Query Frame = 1 
Query:  142 MGPPAHLKPKHKGKALLAGGISGVVEICITYPLEYVKTTRQLSKDARTTYSSVAKSTLNTRGPLGFYRGLSSMVYFAAPKAAIRFGSFEFFSGLLSNADGSDKYGLGPAKGFVAGLGAGATEATFVTTPQETIKIKLIDDQFSRAVPQYRNFFHGIKTIVGESGFGG 642
            MGPPAHLKP HKGKA+LAGGISGVVEIC+TYPLEYVKTTRQLSKD   TY SV ++T+   G  GFYRGLSSMVYFAAPKAAIRFG+FEF SGLLS  +G DKYGLG AKGFVAGLGAGA EAT VTT QETIKIKLIDDQFSR  P Y+NFFHG+KTIV ESGF G
Sbjct:    1 MGPPAHLKPNHKGKAVLAGGISGVVEICMTYPLEYVKTTRQLSKDPNVTYGSVMRNTVKNTGFSGFYRGLSSMVYFAAPKAAIRFGAFEFCSGLLSTPEGGDKYGLGAAKGFVAGLGAGAAEATLVTTAQETIKIKLIDDQFSREKPLYKNFFHGVKTIVAESGFSG 167
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BLAST of mRNA_H-paniculata_contig422.10812.1 vs. uniprot
Match: A0A6U3C197_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6U3C197_9EUKA)

HSP 1 Score: 219 bits (559), Expect = 9.380e-62
Identity = 110/164 (67.07%), Postives = 126/164 (76.83%), Query Frame = 1 
Query:  142 MGPPAHLKPKHKGKALLAGGISGVVEICITYPLEYVKTTRQLSKDARTTYSSVAKSTLNTRGPLGFYRGLSSMVYFAAPKAAIRFGSFEFFSGLLSNADGSDKYGLGPAKGFVAGLGAGATEATFVTTPQETIKIKLIDDQFSRAVPQYRNFFHGIKTIVGESG 633
            MGPPAHLKPKHKGKAL+AGGISG +EIC TYP+EY KT +QLS +  +   +V   TL + GPLG YRGLSSM+YFA PKAAIRFG FE  S +L + DG D YGLG AKGFVAGLGAG  EA FVTTPQETIK+KLI DQF    P++R FFHG+ TI+ E G
Sbjct:    1 MGPPAHLKPKHKGKALVAGGISGALEICCTYPIEYTKTFQQLSTEPLS-MGNVVSRTLKSAGPLGMYRGLSSMLYFATPKAAIRFGGFETCSSMLVDKDGRDIYGLGKAKGFVAGLGAGTLEAIFVTTPQETIKVKLIHDQFLSETPRFRGFFHGVSTIIREEG 163
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BLAST of mRNA_H-paniculata_contig422.10812.1 vs. uniprot
Match: W7TKG4_9STRA (Solute carrier family 25 (Mitochondrial carrier citrate transporter) member 1 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKG4_9STRA)

HSP 1 Score: 208 bits (529), Expect = 2.050e-57
Identity = 110/170 (64.71%), Postives = 126/170 (74.12%), Query Frame = 1 
Query:  151 PAHLKPKHKGKALLAGGISGVVEICITYPLEYVKTTRQLSKDARTTYSSVAKSTLNTRGPLGFYRGLSSMVYFAAPKAAIRFGSFEFFSGLLSNADGSDKYGLGPAKGFVAGLGAGATEATFVTTPQETIKIKLIDDQFSRAVPQYRNFFHGIKTIVGESGFGGWVKSCL 660
            P   KP HKGKA+LAGG+SG  EIC T+P EYVKTT+QLS     +   V   T+  RG  GFYRGLSSM+YFAAPKAAIRF SFEFFSGLL++A+G DKYGLG AKGF+AGLGAG  EA FVTTPQETIKIKLI DQF R   +Y+ FFHG++TIV E    G  +  L
Sbjct:    3 PIGNKPTHKGKAVLAGGLSGAFEICCTFPTEYVKTTQQLSPRP-VSVKQVISETMAERGFFGFYRGLSSMLYFAAPKAAIRFSSFEFFSGLLTDANGGDKYGLGQAKGFLAGLGAGTMEAIFVTTPQETIKIKLIHDQF-RGTNKYQGFFHGVRTIVAEEKLSGVYRGLL 170
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BLAST of mRNA_H-paniculata_contig422.10812.1 vs. uniprot
Match: A0A7S1VIB4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VIB4_9STRA)

HSP 1 Score: 202 bits (515), Expect = 1.560e-55
Identity = 106/164 (64.63%), Postives = 124/164 (75.61%), Query Frame = 1 
Query:  163 KPKHKGKALLAGGISGVVEICITYPLEYVKTTRQLSKDARTTYSSVAKSTLNTRGPLGFYRGLSSMVYFAAPKAAIRFGSFEFFSGLLSNADGSDKYGLGPAKGFVAGLGAGATEATFVTTPQETIKIKLIDDQF-SRAVPQYRNFFHGIKTIVGESGFGGWVK 651
            KPKHKGKAL+AG  +G+ EIC TYP EYVKT+ QL+     T  +V  +T    GP+GFYRGL SMVYFAAPKAAIRF +FE  SGLLS  +G D YGLG AKGFVAGLGAG  EA FVTTPQETIK++LI+D F +   P+YR+FFHG+K+IVGE GF G  K
Sbjct:    6 KPKHKGKALVAGATAGIFEICCTYPTEYVKTSMQLATRP-VTAGNVISTTFAEAGPVGFYRGLPSMVYFAAPKAAIRFAAFETCSGLLSGPNGEDIYGLGKAKGFVAGLGAGTMEAVFVTTPQETIKVRLINDAFRTDGPPKYRSFFHGVKSIVGEYGFAGIYK 168
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BLAST of mRNA_H-paniculata_contig422.10812.1 vs. uniprot
Match: A0A6V3A8C4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3A8C4_HETAK)

HSP 1 Score: 201 bits (512), Expect = 5.200e-55
Identity = 104/167 (62.28%), Postives = 121/167 (72.46%), Query Frame = 1 
Query:  142 MGPPAHLKPKHKGKALLAGGISGVVEICITYPLEYVKTTRQLSKDARTTYSSVAKSTLNTRGPLGFYRGLSSMVYFAAPKAAIRFGSFEFFSGLLSNADGSDKYGLGPAKGFVAGLGAGATEATFVTTPQETIKIKLIDDQFSRAVPQYRNFFHGIKTIVGESGFGG 642
            MGPPAHLKPKHKGKALLAG ISGVVEICITYP+EY KT +QL+   + +   V ++TL   GP G YRGLSSMVY A PKA +RF  FE  + +L N+       LGP KGF AGLGAG  EA FVTTPQETIK+KLIDDQF    P++  FFHG++TIV E+G  G
Sbjct:    1 MGPPAHLKPKHKGKALLAGAISGVVEICITYPIEYTKTMQQLAT-TKMSPIQVVQNTLRQSGPSGMYRGLSSMVYAAGPKAGVRFMGFEQVNSMLPNS-------LGPLKGFFAGLGAGVLEAVFVTTPQETIKVKLIDDQFRSEKPRFNGFFHGVRTIVAENGLSG 159
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BLAST of mRNA_H-paniculata_contig422.10812.1 vs. uniprot
Match: A0A7S1B958_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B958_9STRA)

HSP 1 Score: 196 bits (499), Expect = 4.460e-53
Identity = 100/164 (60.98%), Postives = 126/164 (76.83%), Query Frame = 1 
Query:  163 KPKHKGKALLAGGISGVVEICITYPLEYVKTTRQLSKDARTTYSSVAKSTLNTRGPLGFYRGLSSMVYFAAPKAAIRFGSFEFFSGLLSNADGSDKYGLGPAKGFVAGLGAGATEATFVTTPQETIKIKLIDDQF-SRAVPQYRNFFHGIKTIVGESGFGGWVK 651
            KPKHKGKAL+AG  +G+ EI  TYP EYVKTT QLS   + +  ++ K T+++ GPLGFYRGL SMVYFA PKA+ RF +FE+FS LL N D  D++GLG AKGFVAGLGAG  EA F+TTPQETIK++LI+D F +   P+Y++F HG+++IVGE GFGG  K
Sbjct:    6 KPKHKGKALVAGACAGIFEISCTYPTEYVKTTMQLSTK-KVSVPTIIKDTMSSAGPLGFYRGLPSMVYFAGPKASTRFFAFEYFSALL-NGDSGDRFGLGKAKGFVAGLGAGTMEAIFITTPQETIKVRLINDAFRTDGPPKYKSFSHGVRSIVGEFGFGGLYK 167
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BLAST of mRNA_H-paniculata_contig422.10812.1 vs. uniprot
Match: A0A7S2I9W3_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2I9W3_9EUKA)

HSP 1 Score: 189 bits (480), Expect = 1.540e-50
Identity = 98/160 (61.25%), Postives = 116/160 (72.50%), Query Frame = 1 
Query:  163 KPKHKGKALLAGGISGVVEICITYPLEYVKTTRQLSKDARTTYSSVAKSTLNTRGPLGFYRGLSSMVYFAAPKAAIRFGSFEFFSGLLSNADGSDKYGLGPAKGFVAGLGAGATEATFVTTPQETIKIKLIDDQFSRAVPQYRNFFHGIKTIVGESGFGG 642
            KPKH GKA++AGGISG +EIC TYPLE+ KT  QLSK+     + V ++T+   GP+GFYRGLSSMVYFA PKAAIRF SFE  S  L+ +DG   +G   A  F+AGL AG  EA FVTTPQETIKIKLIDD F R  P++  FFHG+ TI+ E GFGG
Sbjct:    6 KPKHAGKAIVAGGISGGIEICCTYPLEFTKTVAQLSKEGGGAMA-VVRNTMANEGPIGFYRGLSSMVYFATPKAAIRFSSFEAASAALTTSDGKPMFGGVTA--FLAGLAAGTAEAIFVTTPQETIKIKLIDDAFVRETPRFTGFFHGVSTIIKEEGFGG 162
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BLAST of mRNA_H-paniculata_contig422.10812.1 vs. uniprot
Match: A0A0M0J9A5_9EUKA (Tricarboxylate transport mitochondrial n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J9A5_9EUKA)

HSP 1 Score: 189 bits (481), Expect = 1.750e-50
Identity = 95/164 (57.93%), Postives = 114/164 (69.51%), Query Frame = 1 
Query:  151 PAHLKPKHKGKALLAGGISGVVEICITYPLEYVKTTRQLSKDARTTYSSVAKSTLNTRGPLGFYRGLSSMVYFAAPKAAIRFGSFEFFSGLLSNADGSDKYGLGPAKGFVAGLGAGATEATFVTTPQETIKIKLIDDQFSRAVPQYRNFFHGIKTIVGESGFGG 642
            P   KPKH GKA++AGGISG +EIC TYPLEY KT  QL K +      V + TL T GPLGFYRGLSSMVYFA PKAA+RF +FE  S +L  +DG   +G     GF+AGL AG  EA  V+TPQETIKI+LIDDQF    P+++ FFHG+ T++ E GF G
Sbjct:    3 PTGNKPKHAGKAIVAGGISGAIEICCTYPLEYTKTVAQLDKGSGGGAMKVVRDTLKTHGPLGFYRGLSSMVYFATPKAALRFSAFEAASDMLKTSDGKPMFGK--VNGFIAGLVAGTAEAIVVSTPQETIKIRLIDDQFKSETPRFKGFFHGVYTLIKEEGFFG 164
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BLAST of mRNA_H-paniculata_contig422.10812.1 vs. uniprot
Match: A0A7S0END0_9EUKA (Hypothetical protein n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0END0_9EUKA)

HSP 1 Score: 182 bits (463), Expect = 5.590e-48
Identity = 98/162 (60.49%), Postives = 113/162 (69.75%), Query Frame = 1 
Query:  163 KPKHKGKALLAGGISGVVEICITYPLEYVKTTRQLSKDARTTYSSVAKSTLNTRGPLGFYRGLSSMVYFAAPKAAIRFGSFEFFSGLLSNADGSDKYGLGPAKGFVAGLGAGATEATFVTTPQETIKIKLIDDQFS--RAVPQYRNFFHGIKTIVGESGFGG 642
            KP H GKA++AGGISG VEIC TYP+E+ KT  QLS   +T    V K+T+ TRG LG Y+GL SMVYFA PKAAIRF  FE  S  +   DGS  +G   A  F+AGL AGA EA FVTTPQETIKIKLIDDQF      P+++ FFHG+KTIV E GF G
Sbjct:    7 KPSHAGKAVVAGGISGAVEICCTYPIEFTKTVLQLSTQKQTAMD-VVKNTVRTRGVLGLYKGLDSMVYFATPKAAIRFSGFEAASNAMRAPDGSPMFGA--ATSFLAGLAAGAIEALFVTTPQETIKIKLIDDQFKTQEGGPRFKGFFHGVKTIVSEEGFAG 165
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BLAST of mRNA_H-paniculata_contig422.10812.1 vs. uniprot
Match: UPI001602D79B (tricarboxylate transport protein, mitochondrial-like isoform X3 n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001602D79B)

HSP 1 Score: 156 bits (394), Expect = 2.140e-38
Identity = 91/195 (46.67%), Postives = 117/195 (60.00%), Query Frame = 1 
Query:   94 REYRSGSILP*--CHTDKMG---PPAHLKPKHKGKALLAGGISGVVEICITYPLEYVKTTRQLSKDARTT-YSS---VAKSTLNTRGPLGFYRGLSSMVYFAAPKAAIRFGSFEFFSGLLSNADGSDKYGLGPAKGFVAGLGAGATEATFVTTPQETIKIKLIDDQFSRAVPQYRNFFHGIKTIVGESGFGGWVK 651
            R Y +  + P    H   +G   P   +K  H GKA++AGGI+G +EICIT+P EYVKT  QL + A    Y       ++T+   G  G YRGLSS+VY + PKAA+RFG+FEFFS ++ N  G     L     F+ GL AGA+EA FV TP ET+K+K I DQ S   P+YR FFHG++ IV E G GG  K
Sbjct:   18 RTYPTSLVNPVLTAHPRNLGAAAPSGSVKLTHPGKAIIAGGIAGGIEICITFPTEYVKTQLQLDEKANPPKYRGPVHCVQATVRDHGVRGLYRGLSSLVYGSIPKAAVRFGAFEFFSNMMRNERGQ----LSKGNSFLCGLMAGASEAVFVVTPMETVKVKFIHDQTS-GNPKYRGFFHGVREIVREQGIGGTYK 207
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig422.10812.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMB0_ECTSI1.370e-7980.24Similar to Solute carrier family 25 (Mitochondrial... [more]
A0A6U3C197_9EUKA9.380e-6267.07Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
W7TKG4_9STRA2.050e-5764.71Solute carrier family 25 (Mitochondrial carrier ci... [more]
A0A7S1VIB4_9STRA1.560e-5564.63Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A6V3A8C4_HETAK5.200e-5562.28Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1B958_9STRA4.460e-5360.98Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S2I9W3_9EUKA1.540e-5061.25Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A0M0J9A5_9EUKA1.750e-5057.93Tricarboxylate transport mitochondrial n=1 Tax=Chr... [more]
A0A7S0END0_9EUKA5.590e-4860.49Hypothetical protein n=2 Tax=Phaeocystis antarctic... [more]
UPI001602D79B2.140e-3846.67tricarboxylate transport protein, mitochondrial-li... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig422contigH-paniculata_contig422:28755..37323 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score268.5
Seed ortholog evalue2.5e-69
Seed eggNOG ortholog2880.D7FMB0
Preferred nameSLC25A1
KEGG koko:K04646,ko:K15100
KEGG TC2.A.29.7
KEGG Pathwayko04142,ko04144,ko04721,ko04961,ko05016,ko05100,map04142,map04144,map04721,map04961,map05016,map05100
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0006139,GO:0006163,GO:0006164,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006839,GO:0006842,GO:0006843,GO:0006855,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015137,GO:0015142,GO:0015238,GO:0015318,GO:0015711,GO:0015746,GO:0015849,GO:0015893,GO:0016006,GO:0016020,GO:0016021,GO:0016051,GO:0018130,GO:0019318,GO:0019319,GO:0019438,GO:0019637,GO:0019693,GO:0019866,GO:0022857,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034220,GO:0034641,GO:0034654,GO:0035337,GO:0035383,GO:0035384,GO:0035674,GO:0042221,GO:0042493,GO:0042891,GO:0042895,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046364,GO:0046390,GO:0046483,GO:0046942,GO:0046943,GO:0046949,GO:0050896,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0055085,GO:0055086,GO:0071616,GO:0071702,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098656,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901568,GO:1901570,GO:1901576,GO:1903825,GO:1905039,GO:1990542,GO:1990546
EggNOG free text desc.mitochondrial tricarboxylic acid transmembrane transport
EggNOG OGsKOG0756@1,KOG0756@2759
Ec32 ortholog descriptionMitochondrial substrate/solute carrier
Ec32 orthologEc-17_003620.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko04131,ko04147
Exons3
Model size2460
Cds size585
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig422.10812.1prot_H-paniculata_contig422.10812.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig422 28896..35589 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930284.5926607-UTR-H-paniculata_contig422:28754..288951622930284.5926607-UTR-H-paniculata_contig422:28754..28895Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig422 28755..28895 +
1691481225.0689344-UTR-H-paniculata_contig422:28754..288951691481225.0689344-UTR-H-paniculata_contig422:28754..28895Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig422 28755..28895 +
1622930284.6560214-UTR-H-paniculata_contig422:35589..373231622930284.6560214-UTR-H-paniculata_contig422:35589..37323Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig422 35590..37323 +
1691481225.1068025-UTR-H-paniculata_contig422:35589..373231691481225.1068025-UTR-H-paniculata_contig422:35589..37323Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig422 35590..37323 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930284.6077626-CDS-H-paniculata_contig422:28895..290271622930284.6077626-CDS-H-paniculata_contig422:28895..29027Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig422 28896..29027 +
1691481225.0804818-CDS-H-paniculata_contig422:28895..290271691481225.0804818-CDS-H-paniculata_contig422:28895..29027Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig422 28896..29027 +
1622930284.626085-CDS-H-paniculata_contig422:33723..339151622930284.626085-CDS-H-paniculata_contig422:33723..33915Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig422 33724..33915 +
1691481225.0889928-CDS-H-paniculata_contig422:33723..339151691481225.0889928-CDS-H-paniculata_contig422:33723..33915Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig422 33724..33915 +
1622930284.6434753-CDS-H-paniculata_contig422:35328..355891622930284.6434753-CDS-H-paniculata_contig422:35328..35589Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig422 35329..35589 +
1691481225.0979187-CDS-H-paniculata_contig422:35328..355891691481225.0979187-CDS-H-paniculata_contig422:35328..35589Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig422 35329..35589 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig422.10812.1

>prot_H-paniculata_contig422.10812.1 ID=prot_H-paniculata_contig422.10812.1|Name=mRNA_H-paniculata_contig422.10812.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=195bp
MGPPAHLKPKHKGKALLAGGISGVVEICITYPLEYVKTTRQLSKDARTTY
SSVAKSTLNTRGPLGFYRGLSSMVYFAAPKAAIRFGSFEFFSGLLSNADG
SDKYGLGPAKGFVAGLGAGATEATFVTTPQETIKIKLIDDQFSRAVPQYR
NFFHGIKTIVGESGFGGWVKSCLICNHFVMRGNTFESWDKSTYL*
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mRNA from alignment at H-paniculata_contig422:28755..37323+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig422.10812.1 ID=mRNA_H-paniculata_contig422.10812.1|Name=mRNA_H-paniculata_contig422.10812.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8569bp|location=Sequence derived from alignment at H-paniculata_contig422:28755..37323+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCGCGCTTGCAGAAAAGAACGGGCTAACGATTGGTCAGCTGCTGTTCCAC
CAACTCGGGCACAAAAGTGCTGTGGTGCTGTTTGTAGTTACGCCGCGAGT
ATCGTTCCGGGAGCATTCTCCCCTAGTGCCACACAGATAAGATGGGACCG
CCGGCGCATCTGAAGCCCAAGCACAAGGGAAAGGCCTTGCTGGCCGGGGG
AATATCAGGCGTGGTGGAGATCTGCATCACCTACCCGCTGGAGTATGTCA
AGACAACTCGCCAACTCAGCAAGGTTTGGACGGCTATTGGGATATAAGTT
GATACTGGGAGAGGCAAACAACAGTGGTGACTGTACAACGCTGTTGTTGT
TCGGTCATGTTCAACAAAGTATGTTTATAGTTCGGTGGATTGGCACGCGT
CCCTATGACAATTCGCAATTACACTCGACTGGGTGGTGGAGTGCATTGCA
TTACCGCGTGTTTCTGTATAACCCATGGGCGGAGAGGACATCCTCTCGGA
AAGGTTGATGGGGGTGTTTTGGTTGCCGAGTTAGTTGTTGGGCGGTAGTG
GCTTGTCTTCGTATTGGTCACGTTTCTGCGCCCAAACGCGTATTGCACCC
ACAGTGGTCGTTGCTTGTTCATGCGTGATGAACGCTCAGTAGATATCCAC
AGTTCACAGTTGTGACGTTATCGCTGCTCCGAAGCACACAGGACCCGCCC
ATCTACGTGCATAGATGAGTGGCCGTCGGCAGTTATACAGCACTGCACCA
TTCTTTTAATCGTTTCCTACGACCATCGCAAGGCATCGGGCAAGTACGAT
GCAGAAGTCCCGACTGACCAGCACGCCATTATACTGAGTACTTTATTATA
CTGTATCGTGTTTGAATGTGTAGCAGTACTGCACCATAATCACGGCTCAT
CAATCTGTATACGTGATCCATGATGCAGATGATGTATTTGTTCCTTCTCA
GATGATCAGTCTATCAGCCTAAACACACCGTGTGCAACAAACAGGTGGAT
GCTGAATGATGCTTCCATCCCGTCTCTGTCAAGCTACTATGCATGCCTGG
AGTGCAGCAGCTTTCGTAAACCAAGTCGTGCTTGGATTTTCACTGTCCTG
TGTCCTGATTAACCCTCGAACATATATATGCAGCAGCGCCAATTGTTGTA
AGTCCCTCCAAGAATCCCTTCCTCAGAAAAGAGGAAAACACACTCAGATT
TTTTTCTGCCACAACCCCAATGATGTCATCAATAAGATAGCGAGCTATAT
TCACCGACATGCAGCTAGACAGGCAATCTGCGACCGTAGAGTGTACCAAA
GCATGTGGTACAATCGAAAATTCGCACAGTACTTCGTGTTACTGTGGTCT
ACGGTCCGACCCCTCCATCAACCTGGCTTGACACCGCCCAGTGGCGCAGC
GTTTTGGCGATTGTAGACGCTACTGGGGCCCTATTTGACCCTCGAAAGGA
CATTGTTTCAGTTAGGGGTACGGGTAGTGGTCCTCGGAGCTTAACAAGCC
TCGTAACGTAAAGCTAAGCACCGTACGAAATTTCGGCTGCGACCATCGCA
TTCAATAAACTTCGGTAAAATTGCCTCATGGCATTTGCAGACACCAGACA
CTGTTGTCAGACCTTGCATTCGTGCACAGCAGTACTTGCTGGAAACACAA
ATGCGCAAACCAAATGATTAGTGACTGCCTTTGCAGGATTTACATGCCAC
TCGAAGCCGCACGTCAGGGCATGAAATCAAACATGCCATGTTCTCACGTC
GCTGTTCCGCCACCAGCATACAGTGAGTAATACACCACAGACAGCGAGAG
ACAAGAACAGTTGTCGTCCAACTACATCATCTATACCGTTGATCGAAGCA
TCGCTCACAGCCTTAGTGGCAGTATGCTCAGGTGTTGTATTCCCTGCCGT
CGCTGTCGTCGCTGTTGTTGGCACTTGAAGTGCTTCTGTTACCTGTTACG
GCCAGACAACATAGTCAGCCCGAAAAGGATGTCGCTCCCTCCCCAAAAAA
TACAGTAGCTCAAAAGGAAATTGACCGAGCCTGAATGACTGATCACCCCC
CTCTCTGTCTGCAAGACTGTTAGATGCCTTTTTTTGGTTCCGAAGCAGCG
TCTTCAAAACCGCCAGAAGGGTTAAATTTCTGTACTTTCGCACCTTCGGA
TACCGTCCGTTCGTGGGAGTGTAGCACATGCTGGATGTGTACATTTGCAT
ATTAGACTCCGTCTGGAAAAGTTGCACCCCTCGGACGAGTACGAACAATT
GGCATATTCGCCACGGAAATTGACAAGTGTTCGCTTGAGTTTCATAATGA
GCTAGTGTATTCTATGTGCCCCGGACCATCCACGATTGCTAATAATACTC
GCAAATCGAACGGACAGGGGTGGGTACTTTATTCTGTGTGTTCGCCCATT
CTGAAATTTAGGCGAATACTTTTTTAATTCTCGTGGCTAATATGCCAATT
GTTCGTATTTGTTCGGGGGGGTGAAAACGTCGGAGCATTCCAGCATTCGC
GACGATAAGTTAACAGTATTCGCCTGAGAAGGCTCAGAATGTAGTGCGGT
CACATAGAACACAGCCTTGACCTCTGTGTTGCCGTCTCATTACTAATAAT
ATTATTCGGAGAAGTCACCCGTAAATGTGCCCTACTGGGCACATAAAACC
TTCCGGAGCACGTAAAGTGAACAAATATGCTCGTGCTCATGCTCATGCTC
AACCTGCAGGCGAATACTTGAATATCTTATTTTACTCTTGTCGAGAGTAA
TGAATGCCTCCAGGTAGAAGTATTTCCTTCATTCATTCAGTGTGTGAAAA
AATTTCACAGTTCCGACGACGACGACGACGACGACGACGACGACTACCCT
GAATCGTTCCGGTAGTCGTCGGAGCTTCGGAAAATTGGGCATACGAGTCA
ACCATTGTCGTGCGATTCCCAGGAGATGAGGGCATCTCTTACGGGGTCTG
AATTAGAAGAAAAAACGAAACATCGGTTTCAGTTTGTAGGGCATGATGTA
CACGAGGCCGTTTTTGTCCTATTTTTCCGTTTCCGAAAGGTGAAAATCGC
CGCAGCGAGCTGCTTGACCACTGCGACCAAAATGCATCTCGCATGTATGG
GGGCAACACGCCGTCGAGTGCTTTGGCACATTTCCCTTGATTTGGAGCTC
GCAATCGCGATTTCCATTTTTTCTGATTCAGACAAATCGGAATAGTTGGG
CAAAGAACGACCTCGTTTGGAACGGTCCTGAAGGATCATCGAGAAATATT
CACCATGTACATGAGCTGAAGACAGACGGCATACTACTGTAGATCACTTG
TAACTCGCCCTCACAGGAGACGGATCGAGCCAACCTCGTTCGTGTCCCAT
GCTCGAACTCTCTAGCATGAAGTCAAGTATTGATGCCGAATTTCAAATTT
CAGGTTTAACCGGTTTTTGACTGCTCAAATCTGGCAAGGAAATTCGCCGC
CCCTCATGGCAGATAGTTACAGTACAGACAGTAGATGTCCCTATATAAGG
TATGGATGATACACGGCCGAAAGCATACTTTATATAGGCCATACACCCTA
TTCAAATACAGGCCCTTTGCCGAATCTCTATCCTTGAAAAGAGAAATCAC
CTGAATATGTACATCTTATATAGATATGGCTATACCTGCTGTACCGGTTG
TACTGGTACTACTATTTTGGGGATATAACCTGGTGGGTACTAGAAATGTA
GTTATTATTATCGGTATAAATCAATGGTTCTTGGTATATACCCAATATTT
TTCGGAGTTCATACTGACGAGACCGATTGATCGCAGTAGTTTGCCACCAA
GTGCTGGAGATATACCCTGTAATTTTTAGGGTAAATACTGGGGATACTAG
TGTTCACCCGTTGTTTCAACGTGGCGCTGAAATTGTTCTGAGGTACCTGC
TCTCGTGCTGAATACTGGGACAAACTGGCACTATTCTGTATTTTAACTAT
TGAATTTTCCATAACGTAGTCCCGAGTCTACAAATCACACACATTTGTGC
GACTTTTGACCACTGAGTGACACCACTATTTTCCCAGTATTTTCTGAGTA
CGTATCCAGTGTTCTATAAGGTACACACTGGTTTTACTGACTTATACCCA
TCACTTTTCGGAGCTTAAACTGCGCAGCTGAGTCATTCTAACAGGAATTA
CTGAAAGTGTACTCTGTTTGTTTGGAGTTTATACTGACGACACCTGGCCA
TCCTAATATTTTTTCAGCAAGTACTACAGATATGCCCAGTATTTTCGATG
TGGCCCGAGCTTGTATTGGGTACTACTGAGAAAGTATGGGCAATGTCTAG
TATAGTACTGCACTATGAGTGTGATGACAAGTGTATTTTCTCTTTTTTTT
TTTTGACAGGTTGGCTTTTATTATTTGTATCTCGTTTCACAGAATTGGGC
TCTTCATGTTGGTGGAGAATGTCACAGATTTCACGTCAGGTAGTAAGATA
CCTACCTAATTGACGAGCCGCGACTGTACAAATGTTATGCAGATAATTAG
CTTTTAAAACAATATATATTGCTGATGAGTATAGGTGGCTTTGGGTTCAC
GAGGGACACACAGACTTGGATGATCGCTCCTGCCCGCCCCTAATTTTATC
GGTTCATTTTTAGAGTCAGTCATCACTCAGCAGCTTAAATTGCCTGAGCG
TAAGTAGATGAAATAATTATGGTGTATGGGCATGTGTTCCGTATGTACCT
GTACATGTTTTAAACCGTACCCTGACGTTGTTGGCGATGTATGCTGTCTC
TCTGTACGCCATGTTGTTGGAATGTTCCTTGGCAAGTGCTGTACTAGTAC
TAGTTAATGATTATATGCTGCTGTCGCCGCCGTGGTGTTTTCATATATGT
ATTGGGCTCCTGCTCCTGCGTCAGGGTCCTTGTTTGGTCCTTTTCGAAGC
CGTCCCACCCTCCCTAATATATCCACATCACCCTGTCCCACCCCTGTAAC
TGGTAACCTTCAAGAACAGGATGCTAGAACTACTTATTCATCAGTCGCGA
AGAGCACATTGAACACCCGAGGTCCACTGGGCTTCTACCGCGGGCTCTCG
TCTATGGTGTACTTCGCCGCTCCGAAGGCGGCAATTAGATTTGGATCTTT
CGAGTTTTTCTCTGGGTTGTTGAGCAATGCTGACGGGAGCGACAAGTATG
GCCTTGGCCCGGTGAGTTCGTTCTGGACAATGGTTGGATTTTATGGAAGA
AGCGGGGCGGGACGAAATGGGTCAAATGTAAGCCGCGTGCTACAGAACGC
ACTCCCTCCTGTACAAGTCGTATCGGCCTCATTATACAGTAGAGTTTTGG
ATAGGGAATGTTGCCGTCATGTCCCCGGGGAACGGTTGGGGGGTGGGGGG
TCTTACCTCTTGGACCACCAGGCACAGCATGGGCTACGGTCTTCACAGGG
AAGTATCATCGTATCACTTGCGTGTGTACTGTCCTTCAACATGAGATGGT
CTTAACGAAATGAAATATCCAATTTGTCCACACACAACCGCAAGCCTCCT
TCACAAATTATAACCCACGTGCCATGCATGGTTGGTAACTGTAACGCTCG
TAAGATCATTTCGTCGTCGTCGCCATCTTGAGGTTATCCAGCTGACGTTA
CACTTGACTTGTGTGCACTGATGAGCAAAAACAGACCAAAATGCGGGGGG
AGGTAAACATGGAATATTGACTTACAGGTGAACTCGACAGAAATGGAAGA
CTTGATTCATCGTTCACGAGTCAGCCCACTTGCCACAGTTACCAGCCCTG
TGAAGCTAGCACAGTAGCGTTTTTGTGCGGGGTAGGTTATCTAGCTGGGC
TAAATTATATCTCCCATCACTTATCAGCAACTCAGATGAATCGGGTACTG
AAATCAACGTTGCGTACAGTTGTATGCAACATTAGAAATGTTGAAAGGAA
ATATAACTTTTTTTGTTTTCTCTCCTGTCGAGAGATTTGCCGGGCGAAAA
CCGTAGTCTCCCTCAACGCTTCCGTAGTAGGGAGTCTCTCGTTCACGATG
TGTGTTGCCTTCGTCTTGTCTTGGGGTCTTGTTCCGTAGTGGTGTTGCTC
TGTGCTGTCCTGTTGCAGCATCTTGAATTGTGTTTTGTGTCGTGCTACGG
TAATACGAGTACTTCATACCTAGAGGTATCGATATCACCAGGATGAGAAC
ATTTTTTAAACGCGACTATCTCGGTTGCGGAGACAGACCTTACGTGATCG
AAGGACAAAGCTGTCGATCAATCTACAGATAGATCTCCTTGTCGAGGTCT
TTCCAAACGTACATCCGTTGTTTTCAGTAGCTTGCTATCATCATAGTTGT
CGAGGTATAATCGTGTTTGAAAGGCAGTTCGCACCTCACTGTGACACTTG
CGGGGTTTTACCCTATCAGGGTTAACGAAGGTGGTGGATGCTTCCGAACA
GATTCAATAAGGTATCAAGTGTTCTGTCACGGTGTAGCTCTACCTACCGC
GTAGCACCCGTGCCCTTTCGTTTTTCGTAAGCTATGAGTCACAAGAACTC
CTTTGTGTTGACCAAATGTATCTGACTGTGACCGTGTTCCTTTCGCATCT
ATTCACCTACCTCGCGGTGCGCAGGCCAAGGGGTTCGTGGCGGGTCTCGG
GGCGGGTGCAACGGAGGCAACTTTCGTCACCACCCCGCAGGAGACCATCA
AGATCAAGCTCATCGATGACCAGTTCAGCAGGGCTGTGCCGCAGTACAGG
AATTTCTTCCACGGAATAAAGACAATCGTTGGAGAGTCAGGCTTCGGCGG
GTGGGTTAAATCTTGTTTGATCTGCAACCATTTTGTAATGCGAGGCAACA
CATTTGAATCGTGGGACAAGAGTACTTACCTGTAGGTTACGATGAAGAAG
CAACCCTGTAAAGCTTGTTCGGTTTGTGGACAACTAATCTAGTAGCTTAA
AGATGACGGACCCTGCTCTTGCCCCCCCCCCCGCTCCTCGCATTTGCACA
TCCCACACGACTGGGTTTTTCATGGTGAGTCGTAATCGATCATCAGTTTG
GGGGAAGATGCGACACGGAGAATATACCTAGAGGGGATGGTGGTGTGATG
GTGTTAATTTCTTATTGGGCATGATCTAATTTTGCTCGTAAGTGTATACA
ACTGATACTTTGAGGTCAGCTGGATAACCTCAGCATGGGTACAACGGATG
TATTATATGAGCGTTCGAGCTATACTTTTACTAACTTTTGCAAGGGGTTT
TGACTCACGTACGAAAATGAGCAAAAGACCAAAAGGGGTACACCCCTGAG
AATGTCAGAAAGGGGGTACATACCCCTCCTGAAAACGGCATAAAGGGGTA
CAGAAGCCCGTGGGCGTGGAGAGGGGCTGACAAATGAGCAATGGAAGCTT
TTGTGTCTTCACTTGTGCTCTACCCGACGCATACAACCTCTGGGGTGCTT
CCCCCATCATTCGTCCGTAGAAAAAAATGAACAACAACGCAGGGACTGGT
GATTATAAAAATGGCCTTCCACTTGGGGTGACCACATAACCCGAAGGGGG
CGATAACTACAGTAGAGTGGAAGAAAAGTCGAGAGTGGGGCGCCTTTAGG
AGCTCGAGGAGCTAGCAGCTTTTCGTTGTGAGACGAGAGCGGGGAATCTG
GGTGTGTCTTGGATCCTGTGGACGGATCAGGACTATGATACTGCGGGTTG
TATCGTTCTAGCTTTGATTGACCGTCAAAATTGACGTCAAGGAATACGGA
CAGGACAGGTCACCCTGCCTATCAGCCGGTTCCGTTGGAGGTTTTGCTGT
TTTTCAACGCTAGAACGAGGGTAACCACCACCGCTGGGAGTGGCTGTTAA
CGCACTCGTCCCCAGACACGAAGGGCTGCAGAAGTGGATGAAAAGGGGAT
ATCGTCGATCACTGCATAGGCGGTGGGGTACGTACACCTAAAACGTTGAT
AAGAAGGGGTATATGGCCGCCCCAAGTGGAAGGCCACTTTTACAAAGGTC
AGTTCCTGCGTTGTTGATGCTGTGTTTGTACGGACGAATGACTGGTGGAG
CACCCCGAGAACAGTAGATTATCAAAATGGATGATCGATATTTTCATCAA
AGGTGCCAAACGCAAGAAACCGAGAGGCAGACATTGTGACTTTCTTGAAA
CGCTGTCGAACGCACCTGCTCTCGATTGAATTGGACAAGCCAATCTCGAA
ATATTGCGAAAGAAACAAAAACCGAGAAAAACCGTTGCCGGCTCTACATA
TTCTTCGTTTTTGTCCATACCTCGGCAACCAATGGCCCGTGAACGCTGAC
GTCATGCGCTTTCACGCAGTCTTGGATCGCGAAGCATGATTCAGCAATCG
CTGTTGGTAAACTGACCAAGAACCGTCTCGTCGACAGTAAAAAGATCGAT
CTTCAAATTTGATGATCGGATGTTCAAGGGTTGCTCGCGTCGGATAGGGC
AAAACTGAGGTCGCAAGAGCTGCATGGCTTATTTGCCAGCCTCTCTATGA
TCCCACAGACCACTGTACCCTTTTATGCCGTTTTTAGTAGGGTTGTACCC
GCTTTTGTCTATTGTCCGAATAAAACCCCCTTTGGGTGAAATGGAGGATT
TATGTTCGGGGTGTCAGTC
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Coding sequence (CDS) from alignment at H-paniculata_contig422:28755..37323+

>mRNA_H-paniculata_contig422.10812.1 ID=mRNA_H-paniculata_contig422.10812.1|Name=mRNA_H-paniculata_contig422.10812.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1170bp|location=Sequence derived from alignment at H-paniculata_contig422:28755..37323+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGACCGCCGGCGCATCTGAAGCCCAAGCACAAGGGAAAGGCCTTGCT
GGCCGGGGGAATATCAGGCGTGGTGGAGATCTGCATCACCTACCCGCTGG
AGTATGTCAAGACAACTCGCCAACTCAGCAAGATGGGACCGCCGGCGCAT
CTGAAGCCCAAGCACAAGGGAAAGGCCTTGCTGGCCGGGGGAATATCAGG
CGTGGTGGAGATCTGCATCACCTACCCGCTGGAGTATGTCAAGACAACTC
GCCAACTCAGCAAGGATGCTAGAACTACTTATTCATCAGTCGCGAAGAGC
ACATTGAACACCCGAGGTCCACTGGGCTTCTACCGCGGGCTCTCGTCTAT
GGTGTACTTCGCCGCTCCGAAGGCGGCAATTAGATTTGGATCTTTCGAGT
TTTTCTCTGGGTTGTTGAGCAATGCTGACGGGAGCGACAAGTATGGCCTT
GGCCCGGATGCTAGAACTACTTATTCATCAGTCGCGAAGAGCACATTGAA
CACCCGAGGTCCACTGGGCTTCTACCGCGGGCTCTCGTCTATGGTGTACT
TCGCCGCTCCGAAGGCGGCAATTAGATTTGGATCTTTCGAGTTTTTCTCT
GGGTTGTTGAGCAATGCTGACGGGAGCGACAAGTATGGCCTTGGCCCGGC
CAAGGGGTTCGTGGCGGGTCTCGGGGCGGGTGCAACGGAGGCAACTTTCG
TCACCACCCCGCAGGAGACCATCAAGATCAAGCTCATCGATGACCAGTTC
AGCAGGGCTGTGCCGCAGTACAGGAATTTCTTCCACGGAATAAAGACAAT
CGTTGGAGAGTCAGGCTTCGGCGGGTGGGTTAAATCTTGTTTGATCTGCA
ACCATTTTGTAATGCGAGGCAACACATTTGAATCGTGGGACAAGAGTACT
TACCTGTAGGCCAAGGGGTTCGTGGCGGGTCTCGGGGCGGGTGCAACGGA
GGCAACTTTCGTCACCACCCCGCAGGAGACCATCAAGATCAAGCTCATCG
ATGACCAGTTCAGCAGGGCTGTGCCGCAGTACAGGAATTTCTTCCACGGA
ATAAAGACAATCGTTGGAGAGTCAGGCTTCGGCGGGTGGGTTAAATCTTG
TTTGATCTGCAACCATTTTGTAATGCGAGGCAACACATTTGAATCGTGGG
ACAAGAGTACTTACCTGTAG
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