mRNA_H-paniculata_contig422.10810.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig422.10810.1 vs. uniprot
Match: A0A6H5K5N4_9PHAE (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K5N4_9PHAE) HSP 1 Score: 555 bits (1429), Expect = 7.810e-188 Identity = 294/402 (73.13%), Postives = 329/402 (81.84%), Query Frame = 3
Query: 54 MKVRAVCLVLFFFHATCLAFLPSQPLRVSSSSSDSSSNMIRRRL--AATDLSMTIAKKAAKDTTIAVAGSTGYIGKFVTMECVRRGYNTLALTRNPASVIEGAEMVVTDVTDPASLEAAFAGRNIDGVVSCLASRSGTKSDSWAIDYQATRNTLEAAKNEKAAHFVMLSAFCVKKPTLQFQKAKLKFEQELTASGEAGQIGYSIVRPTAFFKSVSGQLEVVQSGAPFVVFGDGTMCKCNPISEADLAVYLVDCMTDETKANQVLNIGGPDDGLTMTAQGKLLFEAVGKEPKIVKAPILLFDLIISGLDFMAKILPKQFEDPAELAKIGKYYAVEDMLTTDPSEKAS-FGKTTLGEHYKRIAVEGNEYDPYTTLFANKKLPTGMIAGMLA-------EEPVSK 1229
MK RA+ CLAFL S PL +S D M RRR +T L MT+ K AAKD T+AVAGSTGYIGKFV +ECVRRGY T+ALTRNP +V+EGAEMV+TDVTDPAS++AA AGR ID +VSCLASRSGTKSDS+AIDYQAT N LE AK E AAHFVMLSAFCVKKP LQFQKAKLKFE++L +G AG+IGYSIVRPTAFFKSVSGQLEVVQ GAPFVVFGDGTMCKCNPI+EADLA YLVDC+TD++K N + NIGGPDDGLTMTAQGKLLFEAVGKEPKI+K P+LLFD+II LD +A ILPKQFEDPAELAKIGKYYAVEDMLT DPSEKA+ FG TLG+HYKRIAVEGN+YDPYTTLFA KK PT +IA ++ E+PV+K
Sbjct: 1 MKFRALSACALVCPTACLAFLSSSPLPRVGNSPD----MRRRRSQSTSTSLDMTVTK-AAKDMTVAVAGSTGYIGKFVALECVRRGYKTIALTRNPDAVVEGAEMVLTDVTDPASVDAALAGRKIDALVSCLASRSGTKSDSFAIDYQATLNCLETAKKEGAAHFVMLSAFCVKKPILQFQKAKLKFEEKLVEAGNAGEIGYSIVRPTAFFKSVSGQLEVVQGGAPFVVFGDGTMCKCNPIAEADLATYLVDCITDKSKNNNIFNIGGPDDGLTMTAQGKLLFEAVGKEPKILKVPVLLFDVIIGALDLLAGILPKQFEDPAELAKIGKYYAVEDMLTVDPSEKATRFGTVTLGQHYKRIAVEGNDYDPYTTLFAGKKNPTSVIASLVGTGVDVEEEQPVAK 397
BLAST of mRNA_H-paniculata_contig422.10810.1 vs. uniprot
Match: A0A835ZBC9_9STRA (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBC9_9STRA) HSP 1 Score: 417 bits (1073), Expect = 1.390e-135 Identity = 215/319 (67.40%), Postives = 251/319 (78.68%), Query Frame = 3
Query: 231 DTTIAVAGSTGYIGKFVTMECVRRGYNTLALTRNPASVIEGAEMVVTDVTDPASLEA-AFAGRNIDGVVSCLASRSGTKSDSWAIDYQATRNTLEAAKNEKAAHFVMLSAFCVKKPTLQFQKAKLKFEQELTASGEA--GQIGYSIVRPTAFFKSVSGQLEVVQSGAPFVVFGDGTMCKCNPISEADLAVYLVDCMTDETKANQVLNIGGPDDGLTMTAQGKLLFEAVGKEPKIVKAPILLFDLIISGLDFMAKILPKQFEDPAELAKIGKYYAVEDMLTTDPSEKASFGKTTLGEHYKRIAVEGNEYDPYTTLFANKK 1178
DTT+ VAG+TGYIGKFV ECVR+GY TLA+TRNP + EGA VV DVT+P L+ AF GR++D V+SCLASRSGTKSDSWA+DYQAT N L+A + HFV+LSA+CV+KP LQFQ AKL+FE+EL A+ +A + YSIVRPTAFFKSVSGQLEVV+ G PFVVFGDGTMCKCNPI+E DLA Y+VD M D + N+VLN+GGPD+G TM QG+LL EA G +P I+KAP+ LFD II GLDF LP FED AELA+IGKYYAVEDMLTT PSEK FG TL EHY+RIA EGN+YDPYTT+FA K
Sbjct: 11 DTTVLVAGATGYIGKFVVQECVRQGYKTLAVTRNPDAKFEGATTVVADVTNPDELQKLAFDGRSVDAVISCLASRSGTKSDSWAVDYQATANCLQAGQKAGIKHFVLLSAYCVRKPLLQFQLAKLQFEKELVAASKAETNPVNYSIVRPTAFFKSVSGQLEVVKGGFPFVVFGDGTMCKCNPIAEVDLARYMVDSMRDPERDNKVLNLGGPDEGYTMAQQGELLAEACGVKPNIMKAPVGLFDAIIGGLDFFGNFLPS-FEDAAELARIGKYYAVEDMLTTQPSEK--FGTITLKEHYERIAREGNDYDPYTTMFAKPK 326
BLAST of mRNA_H-paniculata_contig422.10810.1 vs. uniprot
Match: A0A7S3Y013_HETAK (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y013_HETAK) HSP 1 Score: 374 bits (959), Expect = 7.480e-118 Identity = 202/323 (62.54%), Postives = 246/323 (76.16%), Query Frame = 3
Query: 228 KDTTIAVAGSTGYIGKFVTMECVRRGYN-TLALTRNPASVIE----GAEMVVTDVTDPASLEAAFAGRNIDGVVSCLASRSGTKSDSWAIDYQATRNTLEAAKNEKAAHFVMLSAFCVKKPTLQFQKAKLKFEQELTASGEAGQIGYSIVRPTAFFKSVSGQLEVVQSGAPFVVFGDGTMCKCNPISEADLAVYLVDCMTDETKANQVLNIGGPDDGLTMTAQGKLLFEAVGKE-PKIVKAPILLFDLIISGLDFMAKILPKQFEDPAELAKIGKYYAVEDMLTTDPSEKASFGKTTLGEHYKRIAVEGNEYDPYTTLFANKK 1178
KD+T+ V G+TGYIGKFV ECVRRG+ +A+TR+ E GA + V DVT+P S++ AF G +D V+SCLASRSGTKSDS+ IDYQAT N+LEAA+ KA HFV+LSAFCV+KPTLQFQ AKL+FE+ L + A I +SIVRPTAFFKSVSGQLEVVQ+GAPFV FGDGTMCKCNPI+E+DLA Y+V+C+ + K N+VLN+GGPD+GLTM QG++L EA G + PK API+LFD II L ++ + ED AELA+IGKYYAVEDMLT P EK +GK TL +HY+RIAVEG EYDPYTT+ A K
Sbjct: 64 KDSTVLVVGATGYIGKFVVQECVRRGFKKVIAVTRSEPQGKEEYFNGANIKVADVTNPESIKTAFEGEQVDAVISCLASRSGTKSDSFLIDYQATLNSLEAARAAKAKHFVLLSAFCVRKPTLQFQLAKLQFEKALRS---ADDITHSIVRPTAFFKSVSGQLEVVQAGAPFVYFGDGTMCKCNPIAESDLAEYMVNCIEEVEKRNKVLNLGGPDEGLTMRQQGEILAEACGIDNPKFFGAPIVLFDWIIGALAWLGQ-WSAGAEDAAELARIGKYYAVEDMLTEKPEEK--YGKITLRQHYERIAVEGQEYDPYTTMLAVPK 380
BLAST of mRNA_H-paniculata_contig422.10810.1 vs. uniprot
Match: A0A7R9ZKM2_9STRA (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZKM2_9STRA) HSP 1 Score: 361 bits (926), Expect = 2.750e-113 Identity = 193/326 (59.20%), Postives = 235/326 (72.09%), Query Frame = 3
Query: 246 VAGSTGYIGKFVTMECVRRGYNTLALTRNPASV------------IEGAEMVVTDVTDPASLEAAFAG-----RNIDGVVSCLASRSGTKSDSWAIDYQATRNTLEAAKNEKAAHFVMLSAFCVKKPTLQFQKAKLKFEQELTASGEAGQIGYSIVRPTAFFKSVSGQLEVVQSGAPFVVFGDGTMCKCNPISEADLAVYLVDCMTDETKANQVLNIGGPDDGLTMTAQGKLLFEAVGKEPKIVKAPILLFDLIISGLDFMAKILPKQ-FEDPAELAKIGKYYAVEDMLTTDPSEKASFGKTTLGEHYKRIAVEGNEYDPYTTLFA 1169
VAG+TGYIGK V E VR+GY T+AL R+ V +GA++V DV DPA L A G I+ V+SCLASRSG K D++AIDYQAT+N L+A A HFV+LSAFCVK P LQFQ+AKLKFE +L A + + YSIVRPTAFFKSVSGQLEVVQ GAPFV+FGDG + +CNPI+EADLA YL+DC+ D+++ N +LN+GGPD+ LTM QG++LF++VGKEP AP+ LFD II L ++A + FE+ AEL +IGKYYAVEDMLTT+PSEK FG TL EHY RIAVEG EYDPYTT+FA
Sbjct: 37 VAGATGYIGKSVVRESVRQGYKTIALVRSKDKVESNKGKALYGQFFDGAQIVECDVCDPAQLTKALEGIKSESGKIESVISCLASRSGIKKDAYAIDYQATKNCLDAGMANDARHFVLLSAFCVKNPWLQFQQAKLKFESDLEAQDK---MTYSIVRPTAFFKSVSGQLEVVQQGAPFVMFGDGEVTRCNPIAEADLATYLIDCIADKSRENAILNLGGPDEPLTMKTQGEMLFQSVGKEPNFFFAPLWLFDAIIDSLQWVADTFSSEKFENAAELGRIGKYYAVEDMLTTEPSEK--FGTITLQEHYDRIAVEGQEYDPYTTMFA 357
BLAST of mRNA_H-paniculata_contig422.10810.1 vs. uniprot
Match: B8BXU7_THAPS (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXU7_THAPS) HSP 1 Score: 358 bits (918), Expect = 1.460e-110 Identity = 194/338 (57.40%), Postives = 237/338 (70.12%), Query Frame = 3
Query: 231 DTTIAVAGSTGYIGKFVTMECVRRGYNTLALTRNPASV------------IEGAEMVVTDVTDPASLEAAFA------GRNIDGVVSCLASRSGTKSDSWAIDYQATRNTLEAAKNEKAAHFVMLSAFCVKKPTLQFQKAKLKFEQELTASGEAGQIGYSIVRPTAFFKSVSGQLEVVQSGAPFVVFGDGTMCKCNPISEADLAVYLVDCMTDETKANQVLNIGGPDDGLTMTAQGKLLFEAVGKEPKIVKAPILLFDLIISGLDFMAKIL-PKQFEDPAELAKIGKYYAVEDMLTTDPSEKASFGKTTLGEHYKRIAVEGNEYDPYTTLFANKKLPT 1187
D +AG+TGYIGK E VR+GY T+AL R+ V EGAE+V DV D L A ID VVSCLASRSG K D++AIDYQAT N LE+ + A HFV+LSAFCVK P LQFQ+AKLKFE LTA + + YSIVRPTAFFKSVSGQLEV+QSGAPFV+FGDG + +CNPISEADLA YL+DC+ D+++ N+++N+GGPD+ LTM QG++L+ ++GKEP AP+ LFD+II L ++A ++FE+ AEL +IGKYYAVEDMLTTDP EK FG TL EHY +IAVEG EYDPYTT+FA K PT
Sbjct: 132 DKVAVIAGATGYIGKSTVRESVRQGYKTVALVRDKKKVESDEGKMLYGQFFEGAELVECDVCDAEKLTEALKDISDQYNGKIDAVVSCLASRSGIKKDAYAIDYQATLNCLESGRAVGARHFVLLSAFCVKNPWLQFQQAKLKFESALTAQSD---MSYSIVRPTAFFKSVSGQLEVIQSGAPFVMFGDGEVTRCNPISEADLATYLIDCIADKSRLNKIINLGGPDEPLTMKKQGEMLYASIGKEPNFFYAPLWLFDVIIDSLQWVADTFNSEKFENAAELGRIGKYYAVEDMLTTDPEEK--FGTMTLQEHYDKIAVEGQEYDPYTTMFA--KAPT 462
BLAST of mRNA_H-paniculata_contig422.10810.1 vs. uniprot
Match: A0A1Z5J6R6_FISSO (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6R6_FISSO) HSP 1 Score: 353 bits (905), Expect = 7.800e-110 Identity = 188/337 (55.79%), Postives = 238/337 (70.62%), Query Frame = 3
Query: 225 AKDTTIAVAGSTGYIGKFVTMECVRRGYNTLALTRNP------------ASVIEGAEMVVTDVTDPASLEAAFAG-----RNIDGVVSCLASRSGTKSDSWAIDYQATRNTLEAAKNEKAAHFVMLSAFCVKKPTLQFQKAKLKFEQELTASGEAGQIGYSIVRPTAFFKSVSGQLEVVQSGAPFVVFGDGTMCKCNPISEADLAVYLVDCMTDETKANQVLNIGGPDDGLTMTAQGKLLFEAVGKEPKIVKAPILLFDLIISGLDFMAKIL-PKQFEDPAELAKIGKYYAVEDMLTTDPSEKASFGKTTLGEHYKRIAVEGNEYDPYTTLFANKKL 1181
A + T +AG+TGYIGK E VR+GY T AL R+P A EGAE+V DVT+ A L+ FA + ID +VSCLASRSG K D++ IDYQAT N LEA + A HFV+LSAFCVK P LQFQ+AKLKFE L E + +SIVRPTAFFKSVSGQLEV+QSGAP+V FGDG + +CNPI+E+DLA YL+DC+TD+T+ +++N+GGPD+ LTM QG++LF+A G EP AP+ +FD++I+ L F+A I ++ E+ AE +IGKYYAVEDMLTTDPSEK +G TL EHY RIA EG EYDPYTT+F+ ++
Sbjct: 38 AAEKTAIIAGATGYIGKSCVREAVRQGYKTYALVRDPQKLETKEGQVSFAPFFEGAEIVKCDVTNEADLQKVFADITADRQKIDAIVSCLASRSGIKKDAYLIDYQATLNCLEAGRAVGAGHFVLLSAFCVKNPWLQFQQAKLKFEAALQ---EQTDMTWSIVRPTAFFKSVSGQLEVIQSGAPYVAFGDGEVTRCNPIAESDLATYLLDCVTDKTRHQRIINLGGPDEPLTMKMQGEMLFKATGMEPNFAFAPVWIFDVVINTLQFLADITGSEKLENAAETGRIGKYYAVEDMLTTDPSEK--YGTITLQEHYNRIAKEGQEYDPYTTMFSRNRI 369
BLAST of mRNA_H-paniculata_contig422.10810.1 vs. uniprot
Match: A0A448ZEL1_9STRA (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZEL1_9STRA) HSP 1 Score: 350 bits (898), Expect = 4.310e-109 Identity = 189/329 (57.45%), Postives = 238/329 (72.34%), Query Frame = 3
Query: 237 TIAVAGSTGYIGKFVTMECVRRGYNTLALTRNPASV------------IEGAEMVVTDVTDPASLEAAFA-----GRNIDGVVSCLASRSGTKSDSWAIDYQATRNTLEAAKNEKAAHFVMLSAFCVKKPTLQFQKAKLKFEQELTASGEAGQIGYSIVRPTAFFKSVSGQLEVVQSGAPFVVFGDGTMCKCNPISEADLAVYLVDCMTDETKANQVLNIGGPDDGLTMTAQGKLLFEAVGKEPKIVKAPILLFDLIISGLDFMAKIL-PKQFEDPAELAKIGKYYAVEDMLTTDPSEKASFGKTTLGEHYKRIAVEGNEYDPYTTLFA 1169
T +AG+TGYIGK V E VR+GY T+AL R+ V EGAE++ DV DPA+L G +I+ V+SCLASRSG K D++AIDYQAT+N L++ A HFV+LSAFC K P LQFQ+AKLKFE +L A+ + +I ++IVRPTAFFKSVSGQLEVVQ GAPFV+FGDG + +CNPI+EADLA YLVD +TDE++ N+ +++GGPD+ LTM QG++LF+AVGKE AP+ LFD+II L +++ ++FE+ AEL +IGKYYAVEDMLTTDP EK FG TL EHY RIAVEG EYDPYTT+FA
Sbjct: 39 TAIIAGATGYIGKSVVRESVRQGYKTIALVRDSEKVNNKQGQALYGQFFEGAEVIECDVCDPAALTKTMEKIKADGGDIEAVISCLASRSGIKKDAYAIDYQATKNCLDSGIATGARHFVLLSAFCCKNPWLQFQQAKLKFEADLVAAQD--KITHTIVRPTAFFKSVSGQLEVVQQGAPFVMFGDGKVTRCNPIAEADLATYLVDSITDESRLNRNIDLGGPDEPLTMLKQGEMLFDAVGKETNFFFAPLWLFDVIIDSLQWVSDTFNSEKFENAAELGRIGKYYAVEDMLTTDPDEK--FGTITLQEHYDRIAVEGQEYDPYTTMFA 363
BLAST of mRNA_H-paniculata_contig422.10810.1 vs. uniprot
Match: K0SDG7_THAOC (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SDG7_THAOC) HSP 1 Score: 352 bits (902), Expect = 3.260e-108 Identity = 189/331 (57.10%), Postives = 234/331 (70.69%), Query Frame = 3
Query: 246 VAGSTGYIGKFVTMECVRRGYNTLALTRNPASV------------IEGAEMVVTDVTDPASLEAAF-------AGRNIDGVVSCLASRSGTKSDSWAIDYQATRNTLEAAKNEKAAHFVMLSAFCVKKPTLQFQKAKLKFEQELTASGEAGQIGYSIVRPTAFFKSVSGQLEVVQSGAPFVVFGDGTMCKCNPISEADLAVYLVDCMTDETKANQVLNIGGPDDGLTMTAQGKLLFEAVGKEPKIVKAPILLFDLIISGLDFMAKIL-PKQFEDPAELAKIGKYYAVEDMLTTDPSEKASFGKTTLGEHYKRIAVEGNEYDPYTTLFANKK 1178
VAG+TGYIGK E VR+GY T+AL R+ V EGAE+ DV D L AF + ID V+SCLASRSG K D++AIDYQAT N LE+ + A HFV+LSAFCVK P LQFQ+AKLKFE L A + + +SIVRPTAFFKSVSGQLEV+Q GAPFV+FGDG + +CNPISEADLA YL+DC+ D++++N+++N+GGPD+ LTM QG++L++AVGKEP AP+ LFD II L +++ ++FE+ AEL +IGKYYAVEDMLTTDP EK FG TL EHY +IAVEG EYDPYTT+FA K
Sbjct: 97 VAGATGYIGKSTVRESVRQGYKTIALVRDRKKVESEEGKMLYGTFFEGAEIFECDVCDADKLTEAFREISSKSSSGKIDAVISCLASRSGIKKDAYAIDYQATLNCLESGRAVDARHFVLLSAFCVKNPWLQFQQAKLKFEAALEAQND---MTWSIVRPTAFFKSVSGQLEVIQQGAPFVMFGDGEVTRCNPISEADLATYLIDCIADKSRSNKIINLGGPDEPLTMKKQGEMLYKAVGKEPNFFYAPLWLFDTIIDSLQWVSDTFNSEKFENAAELGRIGKYYAVEDMLTTDPDEK--FGTMTLQEHYDKIAVEGQEYDPYTTMFAAPK 422
BLAST of mRNA_H-paniculata_contig422.10810.1 vs. uniprot
Match: B7GC47_PHATC (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GC47_PHATC) HSP 1 Score: 346 bits (888), Expect = 2.800e-107 Identity = 189/350 (54.00%), Postives = 237/350 (67.71%), Query Frame = 3
Query: 237 TIAVAGSTGYIGKFVTMECVRRGYNTLALTRNPASV--------IEGAEMVVTDVTDPASLEAAFA-------GRNIDGVVSCLASRSGTKSDSWAIDYQATRNTLEAAKNEKAAHFVMLSAFCVKKPTLQFQKAKLKFEQELTASGEAGQIGYSIVRPTAFFKSVSGQLEVVQSGAPFVVFGDGTMCKCNPISEADLAVYLVDCMTDETKANQVLNIGGPDDGLTMTAQGKLLFEAVGKEPKIVKAPILLFDLIISGLDFMAKIL-PKQFEDPAELAKIGKYYAVEDMLTTDPSEKASFGKTTLGEHYKRIAVEGNEYDPYTTLFANKKL----PTGMIAGMLAEEPVS 1226
T +AG+TGYIGK E +R+GY+T AL R+ + ++GA ++ DV D A L+ F R + VVSCLASRSG K D++ IDYQAT N L A + A HFV+LSAFCVK P LQFQ+AKLKFE L E + ++IVRPTAFFKSVSGQLEVVQ GAPFV+FGDG + +CNPI+EA+LA YL+D +TD T+ N V N+GGPD+ LTM QG+++F AV KEP AP+ +FD+II+GL F+A + +Q ED AE +IGKYYAVEDMLTTDP EK +G TL EHY RIAVEG EYDPYTT+FA ++ P A + EPV+
Sbjct: 45 TAIIAGATGYIGKSTVRESLRQGYDTFALVRDATKIDAKTKAEYMDGAHIIECDVCDEAQLQTVFREIADRTPDRKVQAVVSCLASRSGVKKDAYRIDYQATLNCLNAGRAVGARHFVLLSAFCVKNPWLQFQQAKLKFEAALQ---EQSDMTWTIVRPTAFFKSVSGQLEVVQGGAPFVMFGDGQVTRCNPIAEAELAQYLMDSVTDPTRRNLVRNLGGPDEPLTMRKQGEMMFRAVDKEPNYFYAPLWIFDVIINGLQFLADVTRSEQLEDAAETGRIGKYYAVEDMLTTDPEEK--YGTVTLQEHYNRIAVEGQEYDPYTTMFARARVGKFGPEETAAEITTTEPVT 389
BLAST of mRNA_H-paniculata_contig422.10810.1 vs. uniprot
Match: A0A1E7FN43_9STRA (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FN43_9STRA) HSP 1 Score: 337 bits (864), Expect = 6.100e-104 Identity = 184/331 (55.59%), Postives = 231/331 (69.79%), Query Frame = 3
Query: 237 TIAVAGSTGYIGKFVTMECVRRGYNTLALTRNPASV------------IEGAEMVVTDVTDPASLEAAFAG-------RNIDGVVSCLASRSGTKSDSWAIDYQATRNTLEAAKNEKAAHFVMLSAFCVKKPTLQFQKAKLKFEQELTASGEAGQIGYSIVRPTAFFKSVSGQLEVVQSGAPFVVFGDGTMCKCNPISEADLAVYLVDCMTDETKANQVLNIGGPDDGLTMTAQGKLLFEAVGKEPKIVKAPILLFDLIISGLDFMA-KILPKQFEDPAELAKIGKYYAVEDMLTTDPSEKASFGKTTLGEHYKRIAVEGNEYDPYTTLFA 1169
T +AG++GYIGK V E VR+G+ T+AL R+ + EGA++V DVT+P L ID VVSCLASRSG K D++AIDYQA++N L++ + A HFV+LSAFCVK P LQFQ+AKLKFE +L + ++IVRPTAFFKSVSGQLEVVQ GAPFV+FGDG + +CNPI+E DLA YLVD +TD+++ N +++GGPD+ LTM QG++LF AVGK+P V AP+ LFD II L ++A K ++FE+ AEL +IGKYYAVEDMLTT P EK FG TL EHY RIAVEG EYDPYTT+FA
Sbjct: 49 TAVIAGASGYIGKSVVRESVRQGFKTIALVRDKEKITSKQGEAMYGQFFEGADVVECDVTNPDQLTKTLEKIKSEEGCDGIDAVVSCLASRSGIKKDAYAIDYQASKNCLDSGISVGARHFVLLSAFCVKNPWLQFQQAKLKFEADLQGQNT---MSHTIVRPTAFFKSVSGQLEVVQQGAPFVMFGDGKVTRCNPIAEGDLATYLVDSITDKSRENAAIDLGGPDEPLTMLKQGEMLFSAVGKKPFFVFAPLWLFDAIIDSLQWVADKFESEKFENAAELGRIGKYYAVEDMLTTKPEEK--FGTITLQEHYDRIAVEGQEYDPYTTMFA 374 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig422.10810.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig422.10810.1 >prot_H-paniculata_contig422.10810.1 ID=prot_H-paniculata_contig422.10810.1|Name=mRNA_H-paniculata_contig422.10810.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=393bp MKVRAVCLVLFFFHATCLAFLPSQPLRVSSSSSDSSSNMIRRRLAATDLSback to top mRNA from alignment at H-paniculata_contig422:7285..18480+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig422.10810.1 ID=mRNA_H-paniculata_contig422.10810.1|Name=mRNA_H-paniculata_contig422.10810.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11196bp|location=Sequence derived from alignment at H-paniculata_contig422:7285..18480+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig422:7285..18480+ >mRNA_H-paniculata_contig422.10810.1 ID=mRNA_H-paniculata_contig422.10810.1|Name=mRNA_H-paniculata_contig422.10810.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2358bp|location=Sequence derived from alignment at H-paniculata_contig422:7285..18480+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |